FFCP PHASE1:Hg19::chr2:74730399..74730412,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=151534|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=86bp_to_AK096725_5end|description=CAGE_peak_12_at_LOC151534_5end|id=chr2:74730399..74730412,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002564;2.45e-12;3!CL:0000182;5.08e-12;12!CL:0000083;1.38e-09;4!CL:0002569;8.25e-07;6|ontology_enrichment_celltype_v019_2=CL:0002564,2.07e-12,3;CL:0000182,4.30e-12,12;CL:0000083,1.44e-09,4;CL:0002569,9.49e-07,6|ontology_enrichment_development_v019=UBERON:0004161;5.10e-13;11!UBERON:0009497;3.56e-11;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4074;8.34e-18;2!DOID:4905;8.34e-18;2!DOID:3498;8.34e-18;2!DOID:1793;1.38e-09;4!DOID:170;8.25e-07;6|ontology_enrichment_disease_v019_2=DOID:4074,9.07e-18,2;DOID:4905,9.07e-18,2;DOID:3498,9.07e-18,2;DOID:1793,1.44e-09,4;DOID:170,8.48e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002242;2.45e-12;3!UBERON:0002107;5.93e-08;19!UBERON:0006925;5.93e-08;19!UBERON:0011135;6.33e-08;5!UBERON:0002216;6.33e-08;5!UBERON:0011134;6.33e-08;5!UBERON:0002209;6.33e-08;5!UBERON:0002213;6.33e-08;5!UBERON:0007844;6.33e-08;5!UBERON:0011138;6.33e-08;5!UBERON:0001130;6.33e-08;5!UBERON:0001066;6.33e-08;5!UBERON:0001468;6.33e-08;5!UBERON:0000949;7.59e-07;43!UBERON:0003422;8.25e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002242,2.07e-12,3;UBERON:0003068,2.07e-12,3;UBERON:0002328,2.07e-12,3;UBERON:0004880,2.07e-12,3;UBERON:0002107,5.35e-08,19;UBERON:0006925,5.35e-08,19;UBERON:0008836,5.35e-08,19;UBERON:0011135,5.73e-08,5;UBERON:0002216,5.73e-08,5;UBERON:0011134,5.73e-08,5;UBERON:0002209,5.73e-08,5;UBERON:0002213,5.73e-08,5;UBERON:0005856,5.73e-08,5;UBERON:0005866,5.73e-08,5;UBERON:0005863,5.73e-08,5;UBERON:0007844,5.73e-08,5;UBERON:0011138,5.73e-08,5;UBERON:0001130,5.73e-08,5;UBERON:0001066,5.73e-08,5;UBERON:0001468,5.73e-08,5;UBERON:0000949,2.28e-07,45;UBERON:0008835,4.94e-07,22;UBERON:0003894,4.94e-07,22;UBERON:0009854,9.13e-07,23;UBERON:0003422,9.49e-07,6|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,1.21390189767046,0,0,0,0,0.300646838828985,0,0.664653872707185,0,0.627865836814451,0,0,0.277349346026277,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0.391102765469606,0.160317640503067,0.213452994739353,0,0.144090417154106,0,0.514784993585894,0,0.621262677827163,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0.945398187686684,1.2362378757175,1.55028150864625,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,1.19271615249795,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=151534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=86bp_to_AK096725_5end | |||
|description=CAGE_peak_12_at_LOC151534_5end | |||
|id=chr2:74730399..74730412,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.45e-12;3!CL:0000182;5.08e-12;12!CL:0000083;1.38e-09;4!CL:0002569;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.07e-12,3;CL:0000182,4.30e-12,12;CL:0000083,1.44e-09,4;CL:0002569,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.10e-13;11!UBERON:0009497;3.56e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;8.34e-18;2!DOID:4905;8.34e-18;2!DOID:3498;8.34e-18;2!DOID:1793;1.38e-09;4!DOID:170;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,9.07e-18,2;DOID:4905,9.07e-18,2;DOID:3498,9.07e-18,2;DOID:1793,1.44e-09,4;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;2.45e-12;3!UBERON:0002107;5.93e-08;19!UBERON:0006925;5.93e-08;19!UBERON:0011135;6.33e-08;5!UBERON:0002216;6.33e-08;5!UBERON:0011134;6.33e-08;5!UBERON:0002209;6.33e-08;5!UBERON:0002213;6.33e-08;5!UBERON:0007844;6.33e-08;5!UBERON:0011138;6.33e-08;5!UBERON:0001130;6.33e-08;5!UBERON:0001066;6.33e-08;5!UBERON:0001468;6.33e-08;5!UBERON:0000949;7.59e-07;43!UBERON:0003422;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,2.07e-12,3;UBERON:0003068,2.07e-12,3;UBERON:0002328,2.07e-12,3;UBERON:0004880,2.07e-12,3;UBERON:0002107,5.35e-08,19;UBERON:0006925,5.35e-08,19;UBERON:0008836,5.35e-08,19;UBERON:0011135,5.73e-08,5;UBERON:0002216,5.73e-08,5;UBERON:0011134,5.73e-08,5;UBERON:0002209,5.73e-08,5;UBERON:0002213,5.73e-08,5;UBERON:0005856,5.73e-08,5;UBERON:0005866,5.73e-08,5;UBERON:0005863,5.73e-08,5;UBERON:0007844,5.73e-08,5;UBERON:0011138,5.73e-08,5;UBERON:0001130,5.73e-08,5;UBERON:0001066,5.73e-08,5;UBERON:0001468,5.73e-08,5;UBERON:0000949,2.28e-07,45;UBERON:0008835,4.94e-07,22;UBERON:0003894,4.94e-07,22;UBERON:0009854,9.13e-07,23;UBERON:0003422,9.49e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,1.21390189767046,0,0,0,0,0.300646838828985,0,0.664653872707185,0,0.627865836814451,0,0,0.277349346026277,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0.391102765469606,0.160317640503067,0.213452994739353,0,0.144090417154106,0,0.514784993585894,0,0.621262677827163,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0.945398187686684,1.2362378757175,1.55028150864625,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,1.19271615249795,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.929931402945002,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p12@LOC151534 | |||
}} |
Revision as of 19:48, 12 September 2013
Short description: | p12@LOC151534 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_LOC151534_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_AK096725_5end |
EntrezGene: | LOC151534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.07e-12 | 3 |
hepatocyte | 4.30e-12 | 12 |
epithelial cell of pancreas | 1.44e-09 | 4 |
mesenchymal stem cell of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 2.07e-12 | 3 |
axial mesoderm | 2.07e-12 | 3 |
notochord | 2.07e-12 | 3 |
chordamesoderm | 2.07e-12 | 3 |
liver | 5.35e-08 | 19 |
digestive gland | 5.35e-08 | 19 |
liver bud | 5.35e-08 | 19 |
intervertebral cartilage | 5.73e-08 | 5 |
symphysis | 5.73e-08 | 5 |
nonsynovial joint | 5.73e-08 | 5 |
fibrous joint | 5.73e-08 | 5 |
cartilaginous joint | 5.73e-08 | 5 |
developing mesenchymal condensation | 5.73e-08 | 5 |
pre-cartilage condensation | 5.73e-08 | 5 |
cartilaginous condensation | 5.73e-08 | 5 |
cartilage element | 5.73e-08 | 5 |
post-cranial axial skeletal system | 5.73e-08 | 5 |
vertebral column | 5.73e-08 | 5 |
intervertebral disk | 5.73e-08 | 5 |
intervertebral joint | 5.73e-08 | 5 |
endocrine system | 2.28e-07 | 45 |
hepatic diverticulum | 4.94e-07 | 22 |
liver primordium | 4.94e-07 | 22 |
digestive tract diverticulum | 9.13e-07 | 23 |
mesenchyme of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 9.07e-18 | 2 |
pancreatic carcinoma | 9.07e-18 | 2 |
pancreatic ductal adenocarcinoma | 9.07e-18 | 2 |
pancreatic cancer | 1.44e-09 | 4 |
endocrine gland cancer | 8.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.