FFCP PHASE1:Mm9::chr11:80603365..80603366,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:80603365..80603366,-|id=chr11:80603365..80603366,-|ontology_enrichment_celltype=CL:0002563!2.32e-48!9;CL:0002251!2.32e-48!9;CL:0000239!7.64e-29!6;CL:0000677!7.64e-29!6;CL:0000212!7.64e-29!6;CL:0000584!7.64e-29!6;CL:0002076!7.89e-29!15;CL:0000075!9.62e-25!7;CL:0000223!1.75e-21!20;CL:0000066!1.86e-21!25;CL:0002250!2.44e-21!3;CL:0000063!1.38e-07!66|ontology_enrichment_celltype_v019_2=CL:0002250,1.70e-39,3;CL:0002563,8.84e-30,9;CL:0002251,8.84e-30,9;CL:0002076,2.29e-18,15;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!2.32e-48!9;UBERON:0004808!2.32e-48!9;UBERON:0001277!2.32e-48!9;UBERON:0000485!1.72e-39!11;UBERON:0001242!2.42e-33!13;UBERON:0000060!2.42e-33!13;UBERON:0001262!2.42e-33!13;UBERON:0004786!2.42e-33!13;UBERON:0000344!7.89e-29!15;UBERON:0000160!3.46e-18!43;UBERON:0004923!8.38e-18!24;UBERON:0005409!5.72e-13!59;UBERON:0003929!2.30e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.84e-30,9;UBERON:0004808,8.84e-30,9;UBERON:0001277,8.84e-30,9;UBERON:0000485,1.34e-24,11;UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24;UBERON:0000160,1.87e-09,31|phase1_expression=0,0.348975407639361,0,0.30246421130683,1.00179145989269,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,1.44425809875637,0.166234645358492,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr11:80603365..80603366,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:80603365..80603366,- | |||
|id=chr11:80603365..80603366,- | |||
|ontology_enrichment_celltype=CL:0002563!2.32e-48!9;CL:0002251!2.32e-48!9;CL:0000239!7.64e-29!6;CL:0000677!7.64e-29!6;CL:0000212!7.64e-29!6;CL:0000584!7.64e-29!6;CL:0002076!7.89e-29!15;CL:0000075!9.62e-25!7;CL:0000223!1.75e-21!20;CL:0000066!1.86e-21!25;CL:0002250!2.44e-21!3;CL:0000063!1.38e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.70e-39,3;CL:0002563,8.84e-30,9;CL:0002251,8.84e-30,9;CL:0002076,2.29e-18,15;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.32e-48!9;UBERON:0004808!2.32e-48!9;UBERON:0001277!2.32e-48!9;UBERON:0000485!1.72e-39!11;UBERON:0001242!2.42e-33!13;UBERON:0000060!2.42e-33!13;UBERON:0001262!2.42e-33!13;UBERON:0004786!2.42e-33!13;UBERON:0000344!7.89e-29!15;UBERON:0000160!3.46e-18!43;UBERON:0004923!8.38e-18!24;UBERON:0005409!5.72e-13!59;UBERON:0003929!2.30e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.84e-30,9;UBERON:0004808,8.84e-30,9;UBERON:0001277,8.84e-30,9;UBERON:0000485,1.34e-24,11;UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24;UBERON:0000160,1.87e-09,31 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,1.00179145989269,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,1.44425809875637,0.166234645358492,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr11:80603365..80603366,- | |||
}} |
Revision as of 21:07, 12 September 2013
Short description: | p@chr11:80603365..80603366, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:80603365..80603366, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.70e-39 | 3 |
intestinal epithelial cell | 8.84e-30 | 9 |
epithelial cell of alimentary canal | 8.84e-30 | 9 |
endo-epithelial cell | 2.29e-18 | 15 |
endodermal cell | 4.59e-14 | 20 |
epithelial cell | 1.80e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.84e-30 | 9 |
gastrointestinal system epithelium | 8.84e-30 | 9 |
intestinal epithelium | 8.84e-30 | 9 |
simple columnar epithelium | 1.34e-24 | 11 |
intestinal mucosa | 5.26e-21 | 13 |
wall of intestine | 5.26e-21 | 13 |
gastrointestinal system mucosa | 5.26e-21 | 13 |
mucosa | 2.29e-18 | 15 |
organ component layer | 6.63e-12 | 24 |
intestine | 1.87e-09 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.