FFCP PHASE1:Mm9::chr11:83342723..83342749,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:83342723..83342749,-|id=chr11:83342723..83342749,-|ontology_enrichment_celltype=CL:0002031!3.80e-07!25;CL:0000553!7.31e-07!6;CL:0000556!7.31e-07!6|ontology_enrichment_celltype_v019_2=CL:0002092,2.21e-20,3;CL:0002540,2.21e-20,3;CL:0002476,2.90e-14,2;CL:0000738,2.59e-09,17;CL:0002087,2.59e-09,17;CL:0002320,3.36e-08,46;CL:0000134,3.36e-08,46;CL:0002194,1.43e-07,4;CL:0000766,1.43e-07,4;CL:0000234,1.43e-07,4;CL:0000576,1.43e-07,4;CL:0000235,1.43e-07,4;CL:0000864,1.43e-07,4;CL:0002009,1.43e-07,4;CL:0000040,1.43e-07,4;CL:0000559,1.43e-07,4;CL:0000625,3.16e-07,1;CL:0000219,7.34e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.23e-22!48;UBERON:0002390!8.14e-19!45;UBERON:0003061!8.14e-19!45;UBERON:0002405!6.69e-15!70;UBERON:0002371!2.24e-11!16;UBERON:0003081!3.34e-09!88;UBERON:0004177!5.64e-09!29;UBERON:0002106!1.04e-08!6;UBERON:0004457!1.04e-08!6;UBERON:0000042!1.04e-08!6;UBERON:0004854!1.04e-08!6;UBERON:0009034!1.04e-08!6;UBERON:0002095!1.04e-08!6;UBERON:0004782!1.04e-08!6;UBERON:0003281!1.04e-08!6;UBERON:0009664!1.04e-08!6;UBERON:0002296!1.04e-08!6;UBERON:0005602!1.04e-08!6;UBERON:0001179!1.04e-08!6;UBERON:0006293!1.04e-08!6;UBERON:0001474!1.71e-07!22;UBERON:0004765!1.71e-07!22;UBERON:0001434!1.71e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-10,16;UBERON:0002384,3.36e-08,46;UBERON:0002193,8.56e-08,48;UBERON:0002405,8.56e-08,48;UBERON:0001474,1.84e-07,22;UBERON:0004765,1.84e-07,22;UBERON:0001434,1.84e-07,22;UBERON:0000029,2.74e-07,1;UBERON:0001097,2.74e-07,1;UBERON:0003968,2.74e-07,1;UBERON:0001467,2.74e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0.699561878128147,0.315462165358238,0.822686601634433,0.42438965179803,0.0850432901510698,2.78014663362479,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0,0,0.756090389279792,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,4.49949858640699,17.7995945262055,9.2362414942993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,9.04747703635634,32.0904353453039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0.302899349844443,0.15241361331,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:83342723..83342749,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:83342723..83342749,- | |||
|id=chr11:83342723..83342749,- | |||
|ontology_enrichment_celltype=CL:0002031!3.80e-07!25;CL:0000553!7.31e-07!6;CL:0000556!7.31e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.21e-20,3;CL:0002540,2.21e-20,3;CL:0002476,2.90e-14,2;CL:0000738,2.59e-09,17;CL:0002087,2.59e-09,17;CL:0002320,3.36e-08,46;CL:0000134,3.36e-08,46;CL:0002194,1.43e-07,4;CL:0000766,1.43e-07,4;CL:0000234,1.43e-07,4;CL:0000576,1.43e-07,4;CL:0000235,1.43e-07,4;CL:0000864,1.43e-07,4;CL:0002009,1.43e-07,4;CL:0000040,1.43e-07,4;CL:0000559,1.43e-07,4;CL:0000625,3.16e-07,1;CL:0000219,7.34e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.23e-22!48;UBERON:0002390!8.14e-19!45;UBERON:0003061!8.14e-19!45;UBERON:0002405!6.69e-15!70;UBERON:0002371!2.24e-11!16;UBERON:0003081!3.34e-09!88;UBERON:0004177!5.64e-09!29;UBERON:0002106!1.04e-08!6;UBERON:0004457!1.04e-08!6;UBERON:0000042!1.04e-08!6;UBERON:0004854!1.04e-08!6;UBERON:0009034!1.04e-08!6;UBERON:0002095!1.04e-08!6;UBERON:0004782!1.04e-08!6;UBERON:0003281!1.04e-08!6;UBERON:0009664!1.04e-08!6;UBERON:0002296!1.04e-08!6;UBERON:0005602!1.04e-08!6;UBERON:0001179!1.04e-08!6;UBERON:0006293!1.04e-08!6;UBERON:0001474!1.71e-07!22;UBERON:0004765!1.71e-07!22;UBERON:0001434!1.71e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-10,16;UBERON:0002384,3.36e-08,46;UBERON:0002193,8.56e-08,48;UBERON:0002405,8.56e-08,48;UBERON:0001474,1.84e-07,22;UBERON:0004765,1.84e-07,22;UBERON:0001434,1.84e-07,22;UBERON:0000029,2.74e-07,1;UBERON:0001097,2.74e-07,1;UBERON:0003968,2.74e-07,1;UBERON:0001467,2.74e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0.699561878128147,0.315462165358238,0.822686601634433,0.42438965179803,0.0850432901510698,2.78014663362479,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0,0,0.756090389279792,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,4.49949858640699,17.7995945262055,9.2362414942993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,9.04747703635634,32.0904353453039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0.302899349844443,0.15241361331,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:83342723..83342749,- | |||
}} |
Revision as of 21:12, 12 September 2013
Short description: | p@chr11:83342723..83342749, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:83342723..83342749, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.21e-20 | 3 |
mesenchymal stem cell of the bone marrow | 2.21e-20 | 3 |
bone marrow macrophage | 2.90e-14 | 2 |
leukocyte | 2.59e-09 | 17 |
nongranular leukocyte | 2.59e-09 | 17 |
connective tissue cell | 3.36e-08 | 46 |
mesenchymal cell | 3.36e-08 | 46 |
monopoietic cell | 1.43e-07 | 4 |
myeloid leukocyte | 1.43e-07 | 4 |
phagocyte | 1.43e-07 | 4 |
monocyte | 1.43e-07 | 4 |
macrophage | 1.43e-07 | 4 |
tissue-resident macrophage | 1.43e-07 | 4 |
macrophage dendritic cell progenitor | 1.43e-07 | 4 |
monoblast | 1.43e-07 | 4 |
promonocyte | 1.43e-07 | 4 |
CD8-positive, alpha-beta T cell | 3.16e-07 | 1 |
motile cell | 7.34e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-10 | 16 |
connective tissue | 3.36e-08 | 46 |
hemolymphoid system | 8.56e-08 | 48 |
immune system | 8.56e-08 | 48 |
bone element | 1.84e-07 | 22 |
skeletal element | 1.84e-07 | 22 |
skeletal system | 1.84e-07 | 22 |
lymph node | 2.74e-07 | 1 |
axillary lymph node | 2.74e-07 | 1 |
peripheral lymph node | 2.74e-07 | 1 |
shoulder | 2.74e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.