FFCP PHASE1:Mm9::chr11:98273690..98273702,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13866|HGNC=|MCL_coexpression_id=24|UniProt=P70424|association_with_transcript=-81bp_to_ENSMUST00000058295_5end|description=CAGE_peak_6_at_Erbb2_5end|id=chr11:98273690..98273702,+|ontology_enrichment_celltype=CL:0002563!3.60e-07!9;CL:0002251!3.60e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,8.73e-17,6;CL:0000677,8.73e-17,6;CL:0000584,8.73e-17,6;CL:0000075,2.79e-14,7;CL:0002563,6.14e-11,9;CL:0002251,6.14e-11,9;CL:0000682,2.01e-09,3;CL:0000066,9.80e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.37e-12!59;UBERON:0000344!1.44e-11!15;UBERON:0000160!2.49e-11!43;UBERON:0001242!3.97e-10!13;UBERON:0000060!3.97e-10!13;UBERON:0001262!3.97e-10!13;UBERON:0004786!3.97e-10!13;UBERON:0003350!3.60e-07!9;UBERON:0004808!3.60e-07!9;UBERON:0001277!3.60e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.84e-34,31;UBERON:0005409,2.46e-25,47;UBERON:0000344,1.76e-24,15;UBERON:0001242,6.33e-20,13;UBERON:0001262,6.33e-20,13;UBERON:0004786,6.33e-20,13;UBERON:0004923,2.67e-14,24;UBERON:0001007,4.96e-11,116;UBERON:0001555,4.96e-11,116;UBERON:0007026,4.96e-11,116;UBERON:0003350,6.14e-11,9;UBERON:0004808,6.14e-11,9;UBERON:0001277,6.14e-11,9;UBERON:0002108,6.20e-11,4;UBERON:0004119,9.61e-11,118;UBERON:0000925,9.61e-11,118;UBERON:0006595,9.61e-11,118;UBERON:0004921,3.56e-09,114;UBERON:0000485,8.26e-09,11;UBERON:0000331,9.35e-09,3;UBERON:0002116,9.35e-09,3;UBERON:0001204,9.35e-09,3;UBERON:0001168,9.35e-09,3;UBERON:0007023,6.50e-07,51|phase1_expression=0.160148847104794,13.9590163055744,12.2849794635175,11.7961042409664,16.5295590882295,3.3575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0,2.55987876469451,3.44113921600755,10.9104073181854,6.03066794622705,7.54149314400612,5.70070258369122,4.28451220591882,1.55211357458713,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0.768436610643109,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0.427115042397309,0,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.505445516867349,1.05220927943237,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0,0,0.776110112217047,0,0.378212160335639,0,0.43839146485515,0,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0.697601834251224,0,0,0.329119699826961,0,0.243206428637567,0.292399974850665,0,0,0.210289948564127,0,5.61711931072457,2.64450566663544,0.213288250535234,0,0.38660238396628,0.403367049246685,0.444756087689741,1.52180500890047,3.32170343081158,0.494096864172033,0.251335208800269,1.59165177632921,2.14460495831032,1.79763881730844,3.24207074812041,2.38969527905241,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.379419222745544,0.590440591918409,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.220528398054962,0.49465875882444,0.322928853391811,0.361877549568935,0.596861720015682,0.656563598980245,2.04036585640896,0,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,1.30877970992015,3.75883422546199,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.651021924219751,0.419437377702843,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,1.36038230169127,0,0,0,0,0.375364950902364,0.73260649706906,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0,0,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0,1.16965804222704,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p6@Erbb2}} | ||
|EntrezGene=13866 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=P70424 | |||
|association_with_transcript=-81bp_to_ENSMUST00000058295_5end | |||
|description=CAGE_peak_6_at_Erbb2_5end | |||
|id=chr11:98273690..98273702,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.60e-07!9;CL:0002251!3.60e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.73e-17,6;CL:0000677,8.73e-17,6;CL:0000584,8.73e-17,6;CL:0000075,2.79e-14,7;CL:0002563,6.14e-11,9;CL:0002251,6.14e-11,9;CL:0000682,2.01e-09,3;CL:0000066,9.80e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.37e-12!59;UBERON:0000344!1.44e-11!15;UBERON:0000160!2.49e-11!43;UBERON:0001242!3.97e-10!13;UBERON:0000060!3.97e-10!13;UBERON:0001262!3.97e-10!13;UBERON:0004786!3.97e-10!13;UBERON:0003350!3.60e-07!9;UBERON:0004808!3.60e-07!9;UBERON:0001277!3.60e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.84e-34,31;UBERON:0005409,2.46e-25,47;UBERON:0000344,1.76e-24,15;UBERON:0001242,6.33e-20,13;UBERON:0001262,6.33e-20,13;UBERON:0004786,6.33e-20,13;UBERON:0004923,2.67e-14,24;UBERON:0001007,4.96e-11,116;UBERON:0001555,4.96e-11,116;UBERON:0007026,4.96e-11,116;UBERON:0003350,6.14e-11,9;UBERON:0004808,6.14e-11,9;UBERON:0001277,6.14e-11,9;UBERON:0002108,6.20e-11,4;UBERON:0004119,9.61e-11,118;UBERON:0000925,9.61e-11,118;UBERON:0006595,9.61e-11,118;UBERON:0004921,3.56e-09,114;UBERON:0000485,8.26e-09,11;UBERON:0000331,9.35e-09,3;UBERON:0002116,9.35e-09,3;UBERON:0001204,9.35e-09,3;UBERON:0001168,9.35e-09,3;UBERON:0007023,6.50e-07,51 | |||
|phase1_expression=0.160148847104794,13.9590163055744,12.2849794635175,11.7961042409664,16.5295590882295,3.3575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0,2.55987876469451,3.44113921600755,10.9104073181854,6.03066794622705,7.54149314400612,5.70070258369122,4.28451220591882,1.55211357458713,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0.768436610643109,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0.427115042397309,0,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.505445516867349,1.05220927943237,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0,0,0.776110112217047,0,0.378212160335639,0,0.43839146485515,0,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0.697601834251224,0,0,0.329119699826961,0,0.243206428637567,0.292399974850665,0,0,0.210289948564127,0,5.61711931072457,2.64450566663544,0.213288250535234,0,0.38660238396628,0.403367049246685,0.444756087689741,1.52180500890047,3.32170343081158,0.494096864172033,0.251335208800269,1.59165177632921,2.14460495831032,1.79763881730844,3.24207074812041,2.38969527905241,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.379419222745544,0.590440591918409,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.220528398054962,0.49465875882444,0.322928853391811,0.361877549568935,0.596861720015682,0.656563598980245,2.04036585640896,0,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,1.30877970992015,3.75883422546199,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.651021924219751,0.419437377702843,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,1.36038230169127,0,0,0,0,0.375364950902364,0.73260649706906,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0,0,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0,1.16965804222704,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p6@Erbb2 | |||
}} |
Revision as of 21:47, 12 September 2013
Short description: | p6@Erbb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Erbb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -81bp_to_ENSMUST00000058295_5end |
EntrezGene: | Erbb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.73e-17 | 6 |
gut absorptive cell | 8.73e-17 | 6 |
enterocyte | 8.73e-17 | 6 |
columnar/cuboidal epithelial cell | 2.79e-14 | 7 |
intestinal epithelial cell | 6.14e-11 | 9 |
epithelial cell of alimentary canal | 6.14e-11 | 9 |
M cell of gut | 2.01e-09 | 3 |
epithelial cell | 9.80e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.84e-34 | 31 |
gastrointestinal system | 2.46e-25 | 47 |
mucosa | 1.76e-24 | 15 |
intestinal mucosa | 6.33e-20 | 13 |
wall of intestine | 6.33e-20 | 13 |
gastrointestinal system mucosa | 6.33e-20 | 13 |
organ component layer | 2.67e-14 | 24 |
digestive system | 4.96e-11 | 116 |
digestive tract | 4.96e-11 | 116 |
primitive gut | 4.96e-11 | 116 |
epithelium of mucosa | 6.14e-11 | 9 |
gastrointestinal system epithelium | 6.14e-11 | 9 |
intestinal epithelium | 6.14e-11 | 9 |
small intestine | 6.20e-11 | 4 |
endoderm-derived structure | 9.61e-11 | 118 |
endoderm | 9.61e-11 | 118 |
presumptive endoderm | 9.61e-11 | 118 |
subdivision of digestive tract | 3.56e-09 | 114 |
simple columnar epithelium | 8.26e-09 | 11 |
ileal mucosa | 9.35e-09 | 3 |
ileum | 9.35e-09 | 3 |
mucosa of small intestine | 9.35e-09 | 3 |
wall of small intestine | 9.35e-09 | 3 |
adult organism | 6.50e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.