FFCP PHASE1:Mm9::chr12:105322384..105322395,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:105322384..105322395,+|id=chr12:105322384..105322395,+|ontology_enrichment_celltype=CL:0000181!6.08e-19!5;CL:0000417!6.08e-19!5;CL:0000668!6.08e-19!5;CL:0000412!6.08e-19!5;CL:0000182!6.08e-19!5;CL:0000414!1.02e-08!11;CL:0000057!5.34e-07!1;CL:0000632!5.34e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,7.27e-40,5;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.03e-09!22;UBERON:0007499!4.03e-09!22;UBERON:0006925!4.03e-09!22;UBERON:0009497!4.03e-09!22;UBERON:0000015!4.03e-09!22;UBERON:0002423!4.03e-09!22;UBERON:0006235!4.03e-09!22;UBERON:0008835!4.03e-09!22;UBERON:0003894!4.03e-09!22;UBERON:0004161!4.03e-09!22;UBERON:0008836!4.03e-09!22;UBERON:0009854!1.05e-08!23;UBERON:0009856!1.05e-08!23;UBERON:0002365!5.66e-08!25;UBERON:0002330!5.66e-08!25;UBERON:0000305!4.10e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.39e-22,1;UBERON:0002107,7.78e-10,22;UBERON:0007499,7.78e-10,22;UBERON:0006925,7.78e-10,22;UBERON:0009497,7.78e-10,22;UBERON:0000015,7.78e-10,22;UBERON:0002423,7.78e-10,22;UBERON:0006235,7.78e-10,22;UBERON:0008835,7.78e-10,22;UBERON:0003894,7.78e-10,22;UBERON:0004161,7.78e-10,22;UBERON:0008836,7.78e-10,22;UBERON:0009854,1.91e-09,23;UBERON:0009856,1.91e-09,23;UBERON:0002365,9.29e-09,25;UBERON:0002330,9.29e-09,25;UBERON:0005631,1.88e-08,3;UBERON:0000478,1.88e-08,3;UBERON:0000158,1.88e-08,3;UBERON:0004871,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0.860423876981386,0.679971333707751,36.1601138397337,6.49776417447669,5.82434953226536,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,3.21353458054686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr12:105322384..105322395,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:105322384..105322395,+ | |||
|id=chr12:105322384..105322395,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.08e-19!5;CL:0000417!6.08e-19!5;CL:0000668!6.08e-19!5;CL:0000412!6.08e-19!5;CL:0000182!6.08e-19!5;CL:0000414!1.02e-08!11;CL:0000057!5.34e-07!1;CL:0000632!5.34e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.27e-40,5;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.03e-09!22;UBERON:0007499!4.03e-09!22;UBERON:0006925!4.03e-09!22;UBERON:0009497!4.03e-09!22;UBERON:0000015!4.03e-09!22;UBERON:0002423!4.03e-09!22;UBERON:0006235!4.03e-09!22;UBERON:0008835!4.03e-09!22;UBERON:0003894!4.03e-09!22;UBERON:0004161!4.03e-09!22;UBERON:0008836!4.03e-09!22;UBERON:0009854!1.05e-08!23;UBERON:0009856!1.05e-08!23;UBERON:0002365!5.66e-08!25;UBERON:0002330!5.66e-08!25;UBERON:0000305!4.10e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.39e-22,1;UBERON:0002107,7.78e-10,22;UBERON:0007499,7.78e-10,22;UBERON:0006925,7.78e-10,22;UBERON:0009497,7.78e-10,22;UBERON:0000015,7.78e-10,22;UBERON:0002423,7.78e-10,22;UBERON:0006235,7.78e-10,22;UBERON:0008835,7.78e-10,22;UBERON:0003894,7.78e-10,22;UBERON:0004161,7.78e-10,22;UBERON:0008836,7.78e-10,22;UBERON:0009854,1.91e-09,23;UBERON:0009856,1.91e-09,23;UBERON:0002365,9.29e-09,25;UBERON:0002330,9.29e-09,25;UBERON:0005631,1.88e-08,3;UBERON:0000478,1.88e-08,3;UBERON:0000158,1.88e-08,3;UBERON:0004871,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0.860423876981386,0.679971333707751,36.1601138397337,6.49776417447669,5.82434953226536,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,3.21353458054686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:105322384..105322395,+ | |||
}} |
Revision as of 22:04, 12 September 2013
Short description: | p@chr12:105322384..105322395, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105322384..105322395, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.27e-40 | 5 |
endodermal cell | 9.91e-11 | 20 |
epithelial cell | 9.29e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.39e-22 | 1 |
liver | 7.78e-10 | 22 |
epithelial sac | 7.78e-10 | 22 |
digestive gland | 7.78e-10 | 22 |
epithelium of foregut-midgut junction | 7.78e-10 | 22 |
anatomical boundary | 7.78e-10 | 22 |
hepatobiliary system | 7.78e-10 | 22 |
foregut-midgut junction | 7.78e-10 | 22 |
hepatic diverticulum | 7.78e-10 | 22 |
liver primordium | 7.78e-10 | 22 |
septum transversum | 7.78e-10 | 22 |
liver bud | 7.78e-10 | 22 |
digestive tract diverticulum | 1.91e-09 | 23 |
sac | 1.91e-09 | 23 |
exocrine gland | 9.29e-09 | 25 |
exocrine system | 9.29e-09 | 25 |
extraembryonic membrane | 1.88e-08 | 3 |
extraembryonic structure | 1.88e-08 | 3 |
membranous layer | 1.88e-08 | 3 |
somatic layer of lateral plate mesoderm | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.