FFCP PHASE1:Hg19::chr3:15839515..15839526,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23243|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29024|TSSclassifier=S|UniProt=|association_with_transcript=-29bp_to_ENST00000461696_5end|coexpression_cluster_id=C1474|description=CAGE_peak_11_at_ANKRD28_5end|id=chr3:15839515..15839526,-|ontology_enrichment_celltype=CL:0002320!2.02e-14!365;CL:0000134!9.37e-14!358;CL:0000048!2.15e-13!430;CL:0000034!1.05e-12!444;CL:0000219!1.27e-12!390;CL:0000723!1.61e-12!436;CL:0002057!7.58e-11!42;CL:0000860!1.10e-10!45;CL:0000557!1.12e-08!71;CL:0002620!2.58e-08!23;CL:0000057!3.28e-08!75;CL:0000055!2.97e-07!180|ontology_enrichment_celltype_v019=CL:0000860;2.13e-12;33!CL:0002057;2.13e-12;33!CL:0000766;2.05e-08;69!CL:0000473;2.29e-08;39!CL:0000234;2.29e-08;39!CL:0000576;7.23e-08;48!CL:0000097;7.51e-08;5|ontology_enrichment_celltype_v019_2=CL:0000557,3.23e-16,67;CL:0000860,3.86e-14,42;CL:0002057,3.86e-14,42;CL:0002320,8.53e-13,361;CL:0000766,9.15e-13,72;CL:0000839,2.51e-12,66;CL:0000473,1.14e-11,48;CL:0000234,1.14e-11,48;CL:0000134,1.49e-11,354;CL:0000034,2.49e-11,441;CL:0000763,3.43e-11,108;CL:0000049,3.43e-11,108;CL:0002009,4.11e-11,61;CL:0000048,1.70e-10,427;CL:0000723,4.47e-10,433;CL:0000219,1.83e-09,386;CL:0002194,3.33e-09,59;CL:0000576,3.33e-09,59;CL:0000040,3.33e-09,59;CL:0000559,3.33e-09,59;CL:0000097,7.62e-08,5;CL:0002028,7.62e-08,5|ontology_enrichment_development_v019=CL:0002057;5.73e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.01e-14!375;UBERON:0004765!3.82e-10!101;UBERON:0001434!3.82e-10!101;UBERON:0002204!8.11e-10!167;UBERON:0001474!2.89e-09!86;UBERON:0002371!1.09e-08!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001434,4.41e-17,100;UBERON:0004765,2.61e-16,90;UBERON:0002371,9.87e-16,76;UBERON:0001474,4.16e-15,82;UBERON:0002204,3.98e-13,167;UBERON:0002384,1.67e-12,371;UBERON:0002405,2.38e-11,93;UBERON:0002390,2.29e-10,98;UBERON:0003061,2.29e-10,98;UBERON:0002193,1.08e-08,108|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,1.36142988256051,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.684372125364421,0.125542639594803,0.152826811495903,0.246301768349837,0.0787107813136792,1.18009283054671,1.15148819429164,0.464448369948228,0,0.30120591877825,0,0,0,2.05520307534393,1.66198622559563,1.80490002723128,3.90619567288533,0,0,0,0.436194716338694,0,0.242584061187816,0.929716147622738,1.6446715520873,1.54853185447552,2.58923153089935,1.7931249457037,2.83778675866302,3.44745680736619,0.645484683583826,1.35426486594342,0.752969358170419,0.818718450173537,0.898893937780338,2.44867113896722,0.962787081228281,2.55734850319616,0.329851300186716,0.598390972864896,0.426224750532694,2.03146467040009,1.13477044938228,1.24564449799115,2.26123798731069,2.08593167368081,2.38907729175628,0,1.47311054395026,2.21523671208619,0,0,0,0,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,2.80254281490768,1.31692042387539,0.196709770113833,0,0,0,0,0,0,0.668462741311041,0,0,0,0.384273959177026,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0,0.472674085820339,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,1.10298924103761,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0.286836620748814,0,0,0,0,0.933633106199299,0.269421344139376,0,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,2.23125547423153,0.647491777472526,1.40450806702248,2.65400422631361,0.61417158655884,1.85986406116378,0,0.989067717114227,0,0,0.168336113954066,1.50142223846357,1.93944880838928,0.877955241761676,1.5324389789951,0.300476117813194,0.113432183160021,3.22901344239952,0.85422955527427,0,2.40072876867522,0.515262646192195,2.06112432036503,0.930584281657949,1.5189869901714,0.292311015483596,2.27190396819703,0.460249493211497,0.323292113637624,1.42003837006646,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,2.3218396401599,0,0.236613600079688,0,0,0.772057809126758,0.217879444092406,1.42362371466658,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,2.07986957055916,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,5.91195885475132,0.264145302039678,6.01251535068239,11.8178361801908,4.54472760334968,0.126995788584338,0,1.17217447210047,0,0.308482478109971,0,0.285826432630578,0.224262168690721,0,0.36669142910475,1.03417372606222,0,0,0,2.08014873822732,0,0,0.532844358032199,0.857867961948885,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0.8715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95,0.639701945702943,0.476128862927481,0.129177819672012,0.0620747142958579,0.112131862580613,0,0.404234377916439,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0.960546112899439,1.9307228228694,0.0898252021065869,0,0.122241444182866,0,0,0,0|short_description=p11@ANKRD28}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29024 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000461696_5end | |||
|coexpression_cluster_id=C1474 | |||
|description=CAGE_peak_11_at_ANKRD28_5end | |||
|id=chr3:15839515..15839526,- | |||
|ontology_enrichment_celltype=CL:0002320!2.02e-14!365;CL:0000134!9.37e-14!358;CL:0000048!2.15e-13!430;CL:0000034!1.05e-12!444;CL:0000219!1.27e-12!390;CL:0000723!1.61e-12!436;CL:0002057!7.58e-11!42;CL:0000860!1.10e-10!45;CL:0000557!1.12e-08!71;CL:0002620!2.58e-08!23;CL:0000057!3.28e-08!75;CL:0000055!2.97e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.13e-12;33!CL:0002057;2.13e-12;33!CL:0000766;2.05e-08;69!CL:0000473;2.29e-08;39!CL:0000234;2.29e-08;39!CL:0000576;7.23e-08;48!CL:0000097;7.51e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.23e-16,67;CL:0000860,3.86e-14,42;CL:0002057,3.86e-14,42;CL:0002320,8.53e-13,361;CL:0000766,9.15e-13,72;CL:0000839,2.51e-12,66;CL:0000473,1.14e-11,48;CL:0000234,1.14e-11,48;CL:0000134,1.49e-11,354;CL:0000034,2.49e-11,441;CL:0000763,3.43e-11,108;CL:0000049,3.43e-11,108;CL:0002009,4.11e-11,61;CL:0000048,1.70e-10,427;CL:0000723,4.47e-10,433;CL:0000219,1.83e-09,386;CL:0002194,3.33e-09,59;CL:0000576,3.33e-09,59;CL:0000040,3.33e-09,59;CL:0000559,3.33e-09,59;CL:0000097,7.62e-08,5;CL:0002028,7.62e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.01e-14!375;UBERON:0004765!3.82e-10!101;UBERON:0001434!3.82e-10!101;UBERON:0002204!8.11e-10!167;UBERON:0001474!2.89e-09!86;UBERON:0002371!1.09e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,4.41e-17,100;UBERON:0004765,2.61e-16,90;UBERON:0002371,9.87e-16,76;UBERON:0001474,4.16e-15,82;UBERON:0002204,3.98e-13,167;UBERON:0002384,1.67e-12,371;UBERON:0002405,2.38e-11,93;UBERON:0002390,2.29e-10,98;UBERON:0003061,2.29e-10,98;UBERON:0002193,1.08e-08,108 | |||
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| |||
|short_description=p11@ANKRD28 | |||
}} |
Revision as of 22:25, 12 September 2013
Short description: | p11@ANKRD28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_ANKRD28_5end |
Coexpression cluster: | C1474_Mast_CD34_immature_CD14_CD133_pleomorphic_granulocyte |
Association with transcript: | -29bp_to_ENST00000461696_5end |
EntrezGene: | ANKRD28 |
HGNC: | 29024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.23e-16 | 67 |
classical monocyte | 3.86e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-14 | 42 |
connective tissue cell | 8.53e-13 | 361 |
myeloid leukocyte | 9.15e-13 | 72 |
myeloid lineage restricted progenitor cell | 2.51e-12 | 66 |
defensive cell | 1.14e-11 | 48 |
phagocyte | 1.14e-11 | 48 |
mesenchymal cell | 1.49e-11 | 354 |
stem cell | 2.49e-11 | 441 |
myeloid cell | 3.43e-11 | 108 |
common myeloid progenitor | 3.43e-11 | 108 |
macrophage dendritic cell progenitor | 4.11e-11 | 61 |
multi fate stem cell | 1.70e-10 | 427 |
somatic stem cell | 4.47e-10 | 433 |
motile cell | 1.83e-09 | 386 |
monopoietic cell | 3.33e-09 | 59 |
monocyte | 3.33e-09 | 59 |
monoblast | 3.33e-09 | 59 |
promonocyte | 3.33e-09 | 59 |
mast cell | 7.62e-08 | 5 |
basophil mast progenitor cell | 7.62e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 4.41e-17 | 100 |
skeletal element | 2.61e-16 | 90 |
bone marrow | 9.87e-16 | 76 |
bone element | 4.16e-15 | 82 |
musculoskeletal system | 3.98e-13 | 167 |
connective tissue | 1.67e-12 | 371 |
immune system | 2.38e-11 | 93 |
hematopoietic system | 2.29e-10 | 98 |
blood island | 2.29e-10 | 98 |
hemolymphoid system | 1.08e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.