FFCP PHASE1:Mm9::chr12:115135130..115135133,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1506|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:115135130..115135133,+|id=chr12:115135130..115135133,+|ontology_enrichment_celltype=CL:0000066!1.48e-22!25;CL:0002563!1.49e-19!9;CL:0002251!1.49e-19!9;CL:0000473!2.30e-16!3;CL:0000627!2.30e-16!3;CL:0000682!2.30e-16!3;CL:0002250!3.20e-15!3;CL:0000063!1.02e-12!66;CL:0000075!1.22e-11!7;CL:0002076!1.41e-11!15;CL:0000197!3.30e-10!2;CL:0002491!3.30e-10!2;CL:0000098!3.30e-10!2;CL:0000223!1.42e-08!20;CL:0002371!1.61e-08!118;CL:0000144!3.02e-08!121;CL:0000012!3.02e-08!121;CL:0000239!3.27e-08!6;CL:0000677!3.27e-08!6;CL:0000212!3.27e-08!6;CL:0000584!3.27e-08!6|ontology_enrichment_celltype_v019_2=CL:0000682,3.71e-25,3;CL:0000066,2.12e-15,25;CL:0002563,2.14e-14,9;CL:0002251,2.14e-14,9;CL:0000239,1.44e-12,6;CL:0000677,1.44e-12,6;CL:0000584,1.44e-12,6;CL:0000473,3.64e-11,7;CL:0000075,7.34e-11,7;CL:0002076,9.14e-09,15|ontology_enrichment_disease=DOID:0060100!1.53e-07!3;DOID:4045!1.53e-07!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!1.67e-27!11;UBERON:0001242!1.67e-23!13;UBERON:0000060!1.67e-23!13;UBERON:0001262!1.67e-23!13;UBERON:0004786!1.67e-23!13;UBERON:0000344!2.96e-20!15;UBERON:0003350!1.49e-19!9;UBERON:0004808!1.49e-19!9;UBERON:0001277!1.49e-19!9;UBERON:0004923!2.56e-12!24;UBERON:0003465!3.30e-10!2;UBERON:0008193!3.30e-10!2;UBERON:0000032!3.30e-10!2;UBERON:0005744!3.30e-10!2;UBERON:0008001!3.30e-10!2;UBERON:0007497!3.30e-10!2;UBERON:0009955!3.30e-10!2;UBERON:0003067!3.30e-10!2;UBERON:0002546!3.30e-10!2;UBERON:0007914!3.30e-10!2;UBERON:0003457!3.30e-10!2;UBERON:0004766!3.30e-10!2;UBERON:0005253!3.30e-10!2;UBERON:0002227!3.30e-10!2;UBERON:0001846!3.30e-10!2;UBERON:0003128!3.30e-10!2;UBERON:0002241!3.30e-10!2;UBERON:0002105!3.30e-10!2;UBERON:0001678!3.30e-10!2;UBERON:0003129!3.30e-10!2;UBERON:0001694!3.30e-10!2;UBERON:0004681!3.30e-10!2;UBERON:0001839!3.30e-10!2;UBERON:0001690!3.30e-10!2;UBERON:0001844!3.30e-10!2;UBERON:0001849!3.30e-10!2;UBERON:0002499!3.30e-10!2;UBERON:0005944!3.30e-10!2;UBERON:0001855!3.30e-10!2;UBERON:0001703!3.30e-10!2;UBERON:0003069!3.30e-10!2;UBERON:0003051!3.30e-10!2;UBERON:0004288!3.30e-10!2;UBERON:0004637!3.30e-10!2;UBERON:0004761!3.30e-10!2;UBERON:0010113!3.30e-10!2;UBERON:0003089!3.30e-10!2;UBERON:0009123!3.30e-10!2;UBERON:0009617!3.30e-10!2;UBERON:0005641!3.30e-10!2;UBERON:0000331!1.78e-07!3;UBERON:0002116!1.78e-07!3;UBERON:0001204!1.78e-07!3;UBERON:0001168!1.78e-07!3;UBERON:0002329!3.42e-07!11;UBERON:0003077!3.42e-07!11;UBERON:0003059!3.42e-07!11;UBERON:0007282!3.42e-07!11;UBERON:0009618!3.42e-07!11;UBERON:0007285!3.42e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.74e-15,13;UBERON:0001262,2.74e-15,13;UBERON:0004786,2.74e-15,13;UBERON:0003350,2.14e-14,9;UBERON:0004808,2.14e-14,9;UBERON:0001277,2.14e-14,9;UBERON:0000344,2.89e-13,15;UBERON:0000485,7.65e-12,11;UBERON:0004923,2.62e-08,24|phase1_expression=0.160148847104794,2.79180326111489,5.91499011206397,0,0,1.00727563147134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9300310669905,6.8921919385452,1.939241094173,0,0.756090389279792,2.43903561720835,0,0,0,1.44425809875637,0.997407872150954,0.816677425049476,0.418531630736908,4.6880120671428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,4.19931911695385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:115135130..115135133,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1506 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:115135130..115135133,+ | |||
|id=chr12:115135130..115135133,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-22!25;CL:0002563!1.49e-19!9;CL:0002251!1.49e-19!9;CL:0000473!2.30e-16!3;CL:0000627!2.30e-16!3;CL:0000682!2.30e-16!3;CL:0002250!3.20e-15!3;CL:0000063!1.02e-12!66;CL:0000075!1.22e-11!7;CL:0002076!1.41e-11!15;CL:0000197!3.30e-10!2;CL:0002491!3.30e-10!2;CL:0000098!3.30e-10!2;CL:0000223!1.42e-08!20;CL:0002371!1.61e-08!118;CL:0000144!3.02e-08!121;CL:0000012!3.02e-08!121;CL:0000239!3.27e-08!6;CL:0000677!3.27e-08!6;CL:0000212!3.27e-08!6;CL:0000584!3.27e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.71e-25,3;CL:0000066,2.12e-15,25;CL:0002563,2.14e-14,9;CL:0002251,2.14e-14,9;CL:0000239,1.44e-12,6;CL:0000677,1.44e-12,6;CL:0000584,1.44e-12,6;CL:0000473,3.64e-11,7;CL:0000075,7.34e-11,7;CL:0002076,9.14e-09,15 | |||
|ontology_enrichment_disease=DOID:0060100!1.53e-07!3;DOID:4045!1.53e-07!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!1.67e-27!11;UBERON:0001242!1.67e-23!13;UBERON:0000060!1.67e-23!13;UBERON:0001262!1.67e-23!13;UBERON:0004786!1.67e-23!13;UBERON:0000344!2.96e-20!15;UBERON:0003350!1.49e-19!9;UBERON:0004808!1.49e-19!9;UBERON:0001277!1.49e-19!9;UBERON:0004923!2.56e-12!24;UBERON:0003465!3.30e-10!2;UBERON:0008193!3.30e-10!2;UBERON:0000032!3.30e-10!2;UBERON:0005744!3.30e-10!2;UBERON:0008001!3.30e-10!2;UBERON:0007497!3.30e-10!2;UBERON:0009955!3.30e-10!2;UBERON:0003067!3.30e-10!2;UBERON:0002546!3.30e-10!2;UBERON:0007914!3.30e-10!2;UBERON:0003457!3.30e-10!2;UBERON:0004766!3.30e-10!2;UBERON:0005253!3.30e-10!2;UBERON:0002227!3.30e-10!2;UBERON:0001846!3.30e-10!2;UBERON:0003128!3.30e-10!2;UBERON:0002241!3.30e-10!2;UBERON:0002105!3.30e-10!2;UBERON:0001678!3.30e-10!2;UBERON:0003129!3.30e-10!2;UBERON:0001694!3.30e-10!2;UBERON:0004681!3.30e-10!2;UBERON:0001839!3.30e-10!2;UBERON:0001690!3.30e-10!2;UBERON:0001844!3.30e-10!2;UBERON:0001849!3.30e-10!2;UBERON:0002499!3.30e-10!2;UBERON:0005944!3.30e-10!2;UBERON:0001855!3.30e-10!2;UBERON:0001703!3.30e-10!2;UBERON:0003069!3.30e-10!2;UBERON:0003051!3.30e-10!2;UBERON:0004288!3.30e-10!2;UBERON:0004637!3.30e-10!2;UBERON:0004761!3.30e-10!2;UBERON:0010113!3.30e-10!2;UBERON:0003089!3.30e-10!2;UBERON:0009123!3.30e-10!2;UBERON:0009617!3.30e-10!2;UBERON:0005641!3.30e-10!2;UBERON:0000331!1.78e-07!3;UBERON:0002116!1.78e-07!3;UBERON:0001204!1.78e-07!3;UBERON:0001168!1.78e-07!3;UBERON:0002329!3.42e-07!11;UBERON:0003077!3.42e-07!11;UBERON:0003059!3.42e-07!11;UBERON:0007282!3.42e-07!11;UBERON:0009618!3.42e-07!11;UBERON:0007285!3.42e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.74e-15,13;UBERON:0001262,2.74e-15,13;UBERON:0004786,2.74e-15,13;UBERON:0003350,2.14e-14,9;UBERON:0004808,2.14e-14,9;UBERON:0001277,2.14e-14,9;UBERON:0000344,2.89e-13,15;UBERON:0000485,7.65e-12,11;UBERON:0004923,2.62e-08,24 | |||
|phase1_expression=0.160148847104794,2.79180326111489,5.91499011206397,0,0,1.00727563147134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9300310669905,6.8921919385452,1.939241094173,0,0.756090389279792,2.43903561720835,0,0,0,1.44425809875637,0.997407872150954,0.816677425049476,0.418531630736908,4.6880120671428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,4.19931911695385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:115135130..115135133,+ | |||
}} |
Revision as of 22:28, 12 September 2013
Short description: | p@chr12:115135130..115135133, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:115135130..115135133, + |
Coexpression cluster: | MCL_coexpression_mm9:1506 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.71e-25 | 3 |
epithelial cell | 2.12e-15 | 25 |
intestinal epithelial cell | 2.14e-14 | 9 |
epithelial cell of alimentary canal | 2.14e-14 | 9 |
brush border epithelial cell | 1.44e-12 | 6 |
gut absorptive cell | 1.44e-12 | 6 |
enterocyte | 1.44e-12 | 6 |
defensive cell | 3.64e-11 | 7 |
columnar/cuboidal epithelial cell | 7.34e-11 | 7 |
endo-epithelial cell | 9.14e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.74e-15 | 13 |
wall of intestine | 2.74e-15 | 13 |
gastrointestinal system mucosa | 2.74e-15 | 13 |
epithelium of mucosa | 2.14e-14 | 9 |
gastrointestinal system epithelium | 2.14e-14 | 9 |
intestinal epithelium | 2.14e-14 | 9 |
mucosa | 2.89e-13 | 15 |
simple columnar epithelium | 7.65e-12 | 11 |
organ component layer | 2.62e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.