FFCP PHASE1:Hg19::chr3:58523080..58523098,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8309|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=120|TSSclassifier=S|UniProt=Q99424|association_with_transcript=-34bp_to_ENST00000302819_5end|coexpression_cluster_id=C25|description=CAGE_peak_6_at_ACOX2_5end|id=chr3:58523080..58523098,-|ontology_enrichment_celltype=CL:0000181!2.79e-07!12;CL:0000417!2.79e-07!12;CL:0000668!2.79e-07!12;CL:0000414!2.79e-07!12;CL:0000412!2.79e-07!12;CL:0000182!2.79e-07!12|ontology_enrichment_celltype_v019=CL:0000182;2.52e-37;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.62e-37,12;CL:0000223,8.03e-08,58|ontology_enrichment_development_v019=UBERON:0004161;1.97e-26;11!UBERON:0009497;1.93e-22;13!UBERON:0001041;6.07e-10;30!UBERON:0003104;1.50e-09;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;2.71e-07;39|ontology_enrichment_disease_v019_2=DOID:7,1.04e-07,39|ontology_enrichment_uberon=UBERON:0007023!3.02e-08!115|ontology_enrichment_uberon_v019=UBERON:0002108;4.80e-33;4!UBERON:0002107;1.12e-23;19!UBERON:0006925;1.12e-23;19!UBERON:0002423;4.81e-18;25!UBERON:0000160;1.77e-16;17!UBERON:0002365;4.86e-14;31!UBERON:0002330;4.86e-14;31!UBERON:0002368;5.19e-13;33!UBERON:0005409;5.56e-13;22!UBERON:0000949;7.60e-10;43!UBERON:0001007;6.27e-08;81!UBERON:0004921;1.21e-07;33!UBERON:0002114;2.79e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.36e-33,4;UBERON:0002107,1.15e-23,19;UBERON:0006925,1.15e-23,19;UBERON:0008836,1.15e-23,19;UBERON:0008835,1.80e-20,22;UBERON:0003894,1.80e-20,22;UBERON:0009854,1.37e-19,23;UBERON:0007499,4.89e-18,25;UBERON:0009497,4.89e-18,25;UBERON:0000015,4.89e-18,25;UBERON:0002423,4.89e-18,25;UBERON:0006235,4.89e-18,25;UBERON:0004161,4.89e-18,25;UBERON:0009856,2.38e-17,26;UBERON:0000160,1.84e-16,17;UBERON:0002365,1.41e-14,31;UBERON:0002330,1.41e-14,31;UBERON:0002368,6.34e-13,35;UBERON:0004921,1.05e-11,118;UBERON:0005409,1.64e-11,25;UBERON:0000949,4.52e-10,45;UBERON:0001007,2.02e-09,145;UBERON:0001555,2.02e-09,145;UBERON:0007026,2.02e-09,145;UBERON:0004119,1.76e-08,160;UBERON:0000925,1.76e-08,160;UBERON:0006595,1.76e-08,160;UBERON:0003929,2.12e-08,54;UBERON:0005172,2.12e-08,54;UBERON:0005173,2.12e-08,54;UBERON:0002530,1.09e-07,59;UBERON:0002417,1.46e-07,60;UBERON:0000916,1.46e-07,60;UBERON:0011216,2.85e-07,223;UBERON:0002114,3.35e-07,2|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0.37223371266318,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36138745112689,0.611030144933625,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,2.32991899054908,1.6544468284517,1.2362378757175,1.21326378937533,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,6.48262928106735,1.5299169235277,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.0580536810308,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@ACOX2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8309 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=120 | |||
|TSSclassifier=S | |||
|UniProt=Q99424 | |||
|association_with_transcript=-34bp_to_ENST00000302819_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_6_at_ACOX2_5end | |||
|id=chr3:58523080..58523098,- | |||
|ontology_enrichment_celltype=CL:0000181!2.79e-07!12;CL:0000417!2.79e-07!12;CL:0000668!2.79e-07!12;CL:0000414!2.79e-07!12;CL:0000412!2.79e-07!12;CL:0000182!2.79e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.52e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.62e-37,12;CL:0000223,8.03e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.97e-26;11!UBERON:0009497;1.93e-22;13!UBERON:0001041;6.07e-10;30!UBERON:0003104;1.50e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;2.71e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.04e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.80e-33;4!UBERON:0002107;1.12e-23;19!UBERON:0006925;1.12e-23;19!UBERON:0002423;4.81e-18;25!UBERON:0000160;1.77e-16;17!UBERON:0002365;4.86e-14;31!UBERON:0002330;4.86e-14;31!UBERON:0002368;5.19e-13;33!UBERON:0005409;5.56e-13;22!UBERON:0000949;7.60e-10;43!UBERON:0001007;6.27e-08;81!UBERON:0004921;1.21e-07;33!UBERON:0002114;2.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.36e-33,4;UBERON:0002107,1.15e-23,19;UBERON:0006925,1.15e-23,19;UBERON:0008836,1.15e-23,19;UBERON:0008835,1.80e-20,22;UBERON:0003894,1.80e-20,22;UBERON:0009854,1.37e-19,23;UBERON:0007499,4.89e-18,25;UBERON:0009497,4.89e-18,25;UBERON:0000015,4.89e-18,25;UBERON:0002423,4.89e-18,25;UBERON:0006235,4.89e-18,25;UBERON:0004161,4.89e-18,25;UBERON:0009856,2.38e-17,26;UBERON:0000160,1.84e-16,17;UBERON:0002365,1.41e-14,31;UBERON:0002330,1.41e-14,31;UBERON:0002368,6.34e-13,35;UBERON:0004921,1.05e-11,118;UBERON:0005409,1.64e-11,25;UBERON:0000949,4.52e-10,45;UBERON:0001007,2.02e-09,145;UBERON:0001555,2.02e-09,145;UBERON:0007026,2.02e-09,145;UBERON:0004119,1.76e-08,160;UBERON:0000925,1.76e-08,160;UBERON:0006595,1.76e-08,160;UBERON:0003929,2.12e-08,54;UBERON:0005172,2.12e-08,54;UBERON:0005173,2.12e-08,54;UBERON:0002530,1.09e-07,59;UBERON:0002417,1.46e-07,60;UBERON:0000916,1.46e-07,60;UBERON:0011216,2.85e-07,223;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0.37223371266318,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36138745112689,0.611030144933625,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,2.32991899054908,1.6544468284517,1.2362378757175,1.21326378937533,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,6.48262928106735,1.5299169235277,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,1.0580536810308,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ACOX2 | |||
}} |
Revision as of 01:02, 13 September 2013
Short description: | p6@ACOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ACOX2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -34bp_to_ENST00000302819_5end |
EntrezGene: | ACOX2 |
HGNC: | 120 |
UniProt: | Q99424 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.62e-37 | 12 |
endodermal cell | 8.03e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.36e-33 | 4 |
liver | 1.15e-23 | 19 |
digestive gland | 1.15e-23 | 19 |
liver bud | 1.15e-23 | 19 |
hepatic diverticulum | 1.80e-20 | 22 |
liver primordium | 1.80e-20 | 22 |
digestive tract diverticulum | 1.37e-19 | 23 |
epithelial sac | 4.89e-18 | 25 |
epithelium of foregut-midgut junction | 4.89e-18 | 25 |
anatomical boundary | 4.89e-18 | 25 |
hepatobiliary system | 4.89e-18 | 25 |
foregut-midgut junction | 4.89e-18 | 25 |
septum transversum | 4.89e-18 | 25 |
sac | 2.38e-17 | 26 |
intestine | 1.84e-16 | 17 |
exocrine gland | 1.41e-14 | 31 |
exocrine system | 1.41e-14 | 31 |
endocrine gland | 6.34e-13 | 35 |
subdivision of digestive tract | 1.05e-11 | 118 |
gastrointestinal system | 1.64e-11 | 25 |
endocrine system | 4.52e-10 | 45 |
digestive system | 2.02e-09 | 145 |
digestive tract | 2.02e-09 | 145 |
primitive gut | 2.02e-09 | 145 |
endoderm-derived structure | 1.76e-08 | 160 |
endoderm | 1.76e-08 | 160 |
presumptive endoderm | 1.76e-08 | 160 |
gut epithelium | 2.12e-08 | 54 |
abdomen element | 2.12e-08 | 54 |
abdominal segment element | 2.12e-08 | 54 |
gland | 1.09e-07 | 59 |
abdominal segment of trunk | 1.46e-07 | 60 |
abdomen | 1.46e-07 | 60 |
organ system subdivision | 2.85e-07 | 223 |
duodenum | 3.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.04e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.