FFCP PHASE1:Hg19::chr3:71409904..71409927,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3823|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000493010_5end|coexpression_cluster_id=C47|description=CAGE_peak_46_at_FOXP1_5end|id=chr3:71409904..71409927,-|ontology_enrichment_celltype=CL:0000236!2.86e-26!14;CL:0000838!5.71e-20!52;CL:0000542!1.74e-19!53;CL:0000051!1.74e-19!53;CL:0000945!2.16e-19!24;CL:0000826!2.16e-19!24;CL:0000080!2.09e-17!6;CL:0000738!7.23e-12!140;CL:0002087!6.31e-10!119;CL:0000842!8.71e-10!3;CL:0000988!1.05e-09!182;CL:0000767!6.92e-09!3;CL:0000791!1.47e-08!18;CL:0000789!1.47e-08!18;CL:0002420!1.47e-08!18;CL:0002419!1.47e-08!18;CL:0000790!1.47e-08!18;CL:0000037!2.75e-08!172;CL:0000566!2.75e-08!172;CL:0000624!6.62e-08!6;CL:0000224!2.00e-07!4;CL:0000815!4.65e-07!2;CL:0000792!4.65e-07!2;CL:0002677!4.65e-07!2|ontology_enrichment_celltype_v019=CL:0000236;6.08e-53;13!CL:0000945;1.09e-27;24!CL:0000542;5.88e-13;53!CL:0000815;5.64e-12;2!CL:0000792;5.64e-12;2!CL:0002677;5.64e-12;2!CL:0000226;1.93e-08;3!CL:0000842;1.93e-08;3!CL:0000898;2.85e-08;3|ontology_enrichment_celltype_v019_2=CL:0000236,5.23e-49,14;CL:0000945,1.09e-27,24;CL:0000826,1.09e-27,24;CL:0000838,3.00e-16,52;CL:0000542,6.84e-16,53;CL:0000051,6.84e-16,53;CL:0000815,7.26e-12,2;CL:0000792,7.26e-12,2;CL:0002677,7.26e-12,2;CL:0000226,2.16e-08,3;CL:0000842,2.16e-08,3;CL:0000898,3.37e-08,3;CL:0002087,4.84e-08,115|ontology_enrichment_development_v019=CL:0000051;5.88e-13;53!UBERON:0004872;1.04e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!8.65e-36!15;UBERON:0000179!8.65e-36!15;UBERON:0000463!8.65e-36!15;UBERON:0007023!3.81e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-22;15!UBERON:0000179;2.85e-22;15!UBERON:0000463;2.85e-22;15!UBERON:0002390;6.56e-15;32!UBERON:0002193;1.23e-12;42!UBERON:0002106;2.85e-08;3!UBERON:0000029;4.01e-07;1!UBERON:0002372;6.02e-07;1!UBERON:0001961;6.02e-07;1!UBERON:0001744;6.02e-07;1!UBERON:0001042;6.02e-07;1!UBERON:0001735;6.02e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.94e-22,15;UBERON:0000179,2.94e-22,15;UBERON:0000463,2.94e-22,15;UBERON:0002106,2.08e-08,3;UBERON:0004854,2.08e-08,3;UBERON:0009034,2.08e-08,3;UBERON:0002095,2.08e-08,3;UBERON:0004782,2.08e-08,3;UBERON:0003281,2.08e-08,3;UBERON:0009664,2.08e-08,3;UBERON:0002296,2.08e-08,3;UBERON:0005602,2.08e-08,3;UBERON:0001179,2.08e-08,3;UBERON:0006293,2.08e-08,3;UBERON:0000029,4.01e-07,1;UBERON:0002372,5.69e-07,1;UBERON:0001961,5.69e-07,1;UBERON:0001744,5.69e-07,1;UBERON:0001735,5.69e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,17.5996244461323,19.1148513941746,16.011166569544,23.4701622411579,20.4201953388366,21.2658402783159,26.4417949113945,14.3108063180305,31.8759262701291,11.1575065980478,19.8782078625119,1.32171328579026,0,0,0.590129310341499,0,0.205601498999509,0.501559486172034,1.30368906653436,1.4203434172042,0,0.111410456885174,2.06224135232386,2.65840673500345,3.5204502289452,0.25618263945135,0.650296737799391,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,2.37285620900479,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.70894156152249,2.85878130549347,3.29089818468955,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,1.479651084554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,1.18608451472249,0.741383633679017,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,4.46549419630756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000493010_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_46_at_FOXP1_5end | |||
|id=chr3:71409904..71409927,- | |||
|ontology_enrichment_celltype=CL:0000236!2.86e-26!14;CL:0000838!5.71e-20!52;CL:0000542!1.74e-19!53;CL:0000051!1.74e-19!53;CL:0000945!2.16e-19!24;CL:0000826!2.16e-19!24;CL:0000080!2.09e-17!6;CL:0000738!7.23e-12!140;CL:0002087!6.31e-10!119;CL:0000842!8.71e-10!3;CL:0000988!1.05e-09!182;CL:0000767!6.92e-09!3;CL:0000791!1.47e-08!18;CL:0000789!1.47e-08!18;CL:0002420!1.47e-08!18;CL:0002419!1.47e-08!18;CL:0000790!1.47e-08!18;CL:0000037!2.75e-08!172;CL:0000566!2.75e-08!172;CL:0000624!6.62e-08!6;CL:0000224!2.00e-07!4;CL:0000815!4.65e-07!2;CL:0000792!4.65e-07!2;CL:0002677!4.65e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.08e-53;13!CL:0000945;1.09e-27;24!CL:0000542;5.88e-13;53!CL:0000815;5.64e-12;2!CL:0000792;5.64e-12;2!CL:0002677;5.64e-12;2!CL:0000226;1.93e-08;3!CL:0000842;1.93e-08;3!CL:0000898;2.85e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.23e-49,14;CL:0000945,1.09e-27,24;CL:0000826,1.09e-27,24;CL:0000838,3.00e-16,52;CL:0000542,6.84e-16,53;CL:0000051,6.84e-16,53;CL:0000815,7.26e-12,2;CL:0000792,7.26e-12,2;CL:0002677,7.26e-12,2;CL:0000226,2.16e-08,3;CL:0000842,2.16e-08,3;CL:0000898,3.37e-08,3;CL:0002087,4.84e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000051;5.88e-13;53!UBERON:0004872;1.04e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.65e-36!15;UBERON:0000179!8.65e-36!15;UBERON:0000463!8.65e-36!15;UBERON:0007023!3.81e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-22;15!UBERON:0000179;2.85e-22;15!UBERON:0000463;2.85e-22;15!UBERON:0002390;6.56e-15;32!UBERON:0002193;1.23e-12;42!UBERON:0002106;2.85e-08;3!UBERON:0000029;4.01e-07;1!UBERON:0002372;6.02e-07;1!UBERON:0001961;6.02e-07;1!UBERON:0001744;6.02e-07;1!UBERON:0001042;6.02e-07;1!UBERON:0001735;6.02e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.94e-22,15;UBERON:0000179,2.94e-22,15;UBERON:0000463,2.94e-22,15;UBERON:0002106,2.08e-08,3;UBERON:0004854,2.08e-08,3;UBERON:0009034,2.08e-08,3;UBERON:0002095,2.08e-08,3;UBERON:0004782,2.08e-08,3;UBERON:0003281,2.08e-08,3;UBERON:0009664,2.08e-08,3;UBERON:0002296,2.08e-08,3;UBERON:0005602,2.08e-08,3;UBERON:0001179,2.08e-08,3;UBERON:0006293,2.08e-08,3;UBERON:0000029,4.01e-07,1;UBERON:0002372,5.69e-07,1;UBERON:0001961,5.69e-07,1;UBERON:0001744,5.69e-07,1;UBERON:0001735,5.69e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,17.5996244461323,19.1148513941746,16.011166569544,23.4701622411579,20.4201953388366,21.2658402783159,26.4417949113945,14.3108063180305,31.8759262701291,11.1575065980478,19.8782078625119,1.32171328579026,0,0,0.590129310341499,0,0.205601498999509,0.501559486172034,1.30368906653436,1.4203434172042,0,0.111410456885174,2.06224135232386,2.65840673500345,3.5204502289452,0.25618263945135,0.650296737799391,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,2.37285620900479,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.70894156152249,2.85878130549347,3.29089818468955,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,1.479651084554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,1.18608451472249,0.741383633679017,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,4.46549419630756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.97366227757693,2.8361470708374,0,0,0,0,0,1.37618785021362,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,3.62292828463847,0 | |||
|short_description=p46@FOXP1 | |||
}} |
Revision as of 01:19, 13 September 2013
Short description: | p46@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_46_at_FOXP1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000493010_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.23e-49 | 14 |
lymphocyte of B lineage | 1.09e-27 | 24 |
pro-B cell | 1.09e-27 | 24 |
lymphoid lineage restricted progenitor cell | 3.00e-16 | 52 |
lymphocyte | 6.84e-16 | 53 |
common lymphoid progenitor | 6.84e-16 | 53 |
regulatory T cell | 7.26e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.26e-12 | 2 |
naive regulatory T cell | 7.26e-12 | 2 |
single nucleate cell | 2.16e-08 | 3 |
mononuclear cell | 2.16e-08 | 3 |
naive T cell | 3.37e-08 | 3 |
nongranular leukocyte | 4.84e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 2.94e-22 | 15 |
haemolymphatic fluid | 2.94e-22 | 15 |
organism substance | 2.94e-22 | 15 |
spleen | 2.08e-08 | 3 |
gastrointestinal system mesentery | 2.08e-08 | 3 |
stomach region | 2.08e-08 | 3 |
mesentery | 2.08e-08 | 3 |
gastrointestinal system serosa | 2.08e-08 | 3 |
mesentery of stomach | 2.08e-08 | 3 |
gut mesentery | 2.08e-08 | 3 |
dorsal mesentery | 2.08e-08 | 3 |
dorsal mesogastrium | 2.08e-08 | 3 |
peritoneal cavity | 2.08e-08 | 3 |
spleen primordium | 2.08e-08 | 3 |
lymph node | 4.01e-07 | 1 |
tonsil | 5.69e-07 | 1 |
mucosa-associated lymphoid tissue | 5.69e-07 | 1 |
lymphoid tissue | 5.69e-07 | 1 |
tonsillar ring | 5.69e-07 | 1 |
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