FFCP PHASE1:Hg19::chr4:71542660..71542684,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C394|description=CAGE_peak_at_chr4:71542660..71542684,-|id=chr4:71542660..71542684,-|ontology_enrichment_celltype=CL:0000945!1.40e-25!24;CL:0000826!1.40e-25!24;CL:0000236!3.16e-22!14;CL:0000542!1.16e-11!53;CL:0000051!1.16e-11!53;CL:0000838!3.04e-10!52;CL:0000785!1.36e-08!2;CL:0000955!1.36e-08!2;CL:0000818!1.36e-08!2;CL:0000954!1.36e-08!2;CL:0000816!1.36e-08!2|ontology_enrichment_celltype_v019=CL:0000236;2.44e-22;13!CL:0000945;4.24e-12;24|ontology_enrichment_celltype_v019_2=CL:0000236,1.30e-20,14;CL:0000945,5.07e-12,24;CL:0000826,5.07e-12,24|ontology_enrichment_development_v019=UBERON:0008801;2.46e-13;1!UBERON:0006242;2.46e-13;1!UBERON:0001045;6.05e-13;1!UBERON:0006298;6.05e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.96e-26!115;UBERON:0001829!1.06e-09!2;UBERON:0001044!4.98e-07!6;UBERON:0003293!4.98e-07!6;UBERON:0003294!4.98e-07!6;UBERON:0010047!4.98e-07!6;UBERON:0000167!4.98e-07!6|ontology_enrichment_uberon_v019=UBERON:0001829;1.74e-24;2!UBERON:0001044;3.62e-18;6!UBERON:0003293;3.62e-18;6!UBERON:0003294;3.62e-18;6!UBERON:0010047;3.62e-18;6!UBERON:0003408;3.62e-18;6!UBERON:0000167;3.62e-18;6!UBERON:0001831;2.46e-13;1!UBERON:0001567;2.46e-13;1!UBERON:0000029;6.05e-13;1!UBERON:0001154;6.05e-13;1!UBERON:0001736;6.05e-13;1!UBERON:0001153;6.05e-13;1!UBERON:0002171;6.05e-13;1!UBERON:0009854;6.05e-13;1!UBERON:0006518;6.05e-13;1!UBERON:0008949;6.05e-13;1!UBERON:0000101;6.05e-13;1!UBERON:0002167;6.05e-13;1!UBERON:0004921;5.14e-11;33!UBERON:0001041;4.11e-08;14!UBERON:0004089;2.66e-07;2!UBERON:0000341;4.17e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.29e-24,2;UBERON:0001044,2.47e-18,6;UBERON:0003293,2.47e-18,6;UBERON:0003294,2.47e-18,6;UBERON:0010047,2.47e-18,6;UBERON:0000167,2.47e-18,6;UBERON:0001831,2.32e-13,1;UBERON:0001567,2.32e-13,1;UBERON:0008801,2.32e-13,1;UBERON:0000029,3.33e-13,1;UBERON:0001154,4.23e-13,1;UBERON:0001153,4.23e-13,1;UBERON:0001045,4.23e-13,1;UBERON:0001736,4.77e-13,1;UBERON:0006298,4.77e-13,1;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0003408,3.04e-11,10;UBERON:0007023,4.44e-11,114;UBERON:0004089,2.58e-07,2;UBERON:0000341,4.69e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.28019066769952,0.800791974072025,1.14950487990897,1.32208974556972,2.86216126360609,0,0,1.14681968437569,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77670848318032,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,0,1.24271716604159,1.9846640872478,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63371354187996,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0.063647158278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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_at_chr4:71542660..71542684,- | |||
|id=chr4:71542660..71542684,- | |||
|ontology_enrichment_celltype=CL:0000945!1.40e-25!24;CL:0000826!1.40e-25!24;CL:0000236!3.16e-22!14;CL:0000542!1.16e-11!53;CL:0000051!1.16e-11!53;CL:0000838!3.04e-10!52;CL:0000785!1.36e-08!2;CL:0000955!1.36e-08!2;CL:0000818!1.36e-08!2;CL:0000954!1.36e-08!2;CL:0000816!1.36e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.44e-22;13!CL:0000945;4.24e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.30e-20,14;CL:0000945,5.07e-12,24;CL:0000826,5.07e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.46e-13;1!UBERON:0006242;2.46e-13;1!UBERON:0001045;6.05e-13;1!UBERON:0006298;6.05e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-26!115;UBERON:0001829!1.06e-09!2;UBERON:0001044!4.98e-07!6;UBERON:0003293!4.98e-07!6;UBERON:0003294!4.98e-07!6;UBERON:0010047!4.98e-07!6;UBERON:0000167!4.98e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.74e-24;2!UBERON:0001044;3.62e-18;6!UBERON:0003293;3.62e-18;6!UBERON:0003294;3.62e-18;6!UBERON:0010047;3.62e-18;6!UBERON:0003408;3.62e-18;6!UBERON:0000167;3.62e-18;6!UBERON:0001831;2.46e-13;1!UBERON:0001567;2.46e-13;1!UBERON:0000029;6.05e-13;1!UBERON:0001154;6.05e-13;1!UBERON:0001736;6.05e-13;1!UBERON:0001153;6.05e-13;1!UBERON:0002171;6.05e-13;1!UBERON:0009854;6.05e-13;1!UBERON:0006518;6.05e-13;1!UBERON:0008949;6.05e-13;1!UBERON:0000101;6.05e-13;1!UBERON:0002167;6.05e-13;1!UBERON:0004921;5.14e-11;33!UBERON:0001041;4.11e-08;14!UBERON:0004089;2.66e-07;2!UBERON:0000341;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.29e-24,2;UBERON:0001044,2.47e-18,6;UBERON:0003293,2.47e-18,6;UBERON:0003294,2.47e-18,6;UBERON:0010047,2.47e-18,6;UBERON:0000167,2.47e-18,6;UBERON:0001831,2.32e-13,1;UBERON:0001567,2.32e-13,1;UBERON:0008801,2.32e-13,1;UBERON:0000029,3.33e-13,1;UBERON:0001154,4.23e-13,1;UBERON:0001153,4.23e-13,1;UBERON:0001045,4.23e-13,1;UBERON:0001736,4.77e-13,1;UBERON:0006298,4.77e-13,1;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0003408,3.04e-11,10;UBERON:0007023,4.44e-11,114;UBERON:0004089,2.58e-07,2;UBERON:0000341,4.69e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.28019066769952,0.800791974072025,1.14950487990897,1.32208974556972,2.86216126360609,0,0,1.14681968437569,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77670848318032,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,0,1.24271716604159,1.9846640872478,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63371354187996,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.740872583160463,0.717222053926764,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr4:71542660..71542684,- | |||
}} |
Revision as of 11:29, 13 September 2013
Short description: | p@chr4:71542660..71542684, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:71542660..71542684, - |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.30e-20 | 14 |
lymphocyte of B lineage | 5.07e-12 | 24 |
pro-B cell | 5.07e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.29e-24 | 2 |
saliva-secreting gland | 2.47e-18 | 6 |
gland of oral region | 2.47e-18 | 6 |
gland of foregut | 2.47e-18 | 6 |
oral gland | 2.47e-18 | 6 |
oral cavity | 2.47e-18 | 6 |
parotid gland | 2.32e-13 | 1 |
cheek | 2.32e-13 | 1 |
parotid gland primordium | 2.32e-13 | 1 |
lymph node | 3.33e-13 | 1 |
vermiform appendix | 4.23e-13 | 1 |
caecum | 4.23e-13 | 1 |
midgut | 4.23e-13 | 1 |
submandibular gland | 4.77e-13 | 1 |
submandibular gland primordium | 4.77e-13 | 1 |
lower lobe of right lung | 8.64e-13 | 1 |
right lung lobe | 8.64e-13 | 1 |
lower lobe of lung | 8.64e-13 | 1 |
lobe of lung | 8.64e-13 | 1 |
right lung | 8.64e-13 | 1 |
gland of gut | 3.04e-11 | 10 |
adult organism | 4.44e-11 | 114 |
midface | 2.58e-07 | 2 |
throat | 4.69e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.