FFCP PHASE1:Hg19::chr4:86525321..86525343,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83478|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25361|TSSclassifier=S|UniProt=D6RHH1|association_with_transcript=15bp_to_ENST00000512201_5end|coexpression_cluster_id=C138|description=CAGE_peak_19_at_ARHGAP24_5end|id=chr4:86525321..86525343,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000785;1.07e-23;1!CL:0000819;1.07e-23;1!CL:0000945;3.68e-15;24!CL:0002144;9.66e-09;3!CL:0000542;7.11e-08;53!CL:0000236;8.31e-08;13|ontology_enrichment_celltype_v019_2=CL:0000819,1.07e-23,1;CL:0000945,3.68e-15,24;CL:0000826,3.68e-15,24;CL:0000785,1.48e-12,2;CL:0000955,1.48e-12,2;CL:0000818,1.48e-12,2;CL:0000954,1.48e-12,2;CL:0000816,1.48e-12,2;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53;CL:0000817,8.31e-09,3;CL:0002144,9.66e-09,3;CL:0000236,2.52e-07,14;CL:0000838,3.39e-07,52;CL:0002087,7.83e-07,115|ontology_enrichment_development_v019=UBERON:0004872;2.04e-13;7!CL:0000954;1.48e-12;2!CL:0000051;7.11e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;1.07e-23;1!DOID:8675;1.07e-23;1!DOID:12603;1.34e-23;1!DOID:0060058;1.37e-20;10|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-23,1;DOID:8675,1.07e-23,1;DOID:12603,1.34e-23,1;DOID:0060058,1.47e-20,10;DOID:2531,2.40e-07,51;DOID:0060083,2.40e-07,51|ontology_enrichment_uberon=UBERON:0007023!1.98e-15!115;UBERON:0002298!3.59e-11!8;UBERON:0002133!5.63e-09!2;UBERON:0001875!1.48e-08!2;UBERON:0006514!1.48e-08!2;UBERON:0001870!1.86e-08!2;UBERON:0001049!5.63e-08!57;UBERON:0005068!5.63e-08!57;UBERON:0006241!5.63e-08!57;UBERON:0007135!5.63e-08!57;UBERON:0003075!2.76e-07!86;UBERON:0007284!2.76e-07!86;UBERON:0002346!8.10e-07!90|ontology_enrichment_uberon_v019=UBERON:0002106;7.54e-30;3!UBERON:0004177;2.30e-18;5!UBERON:0005057;2.30e-18;5!UBERON:0010523;9.66e-09;3!UBERON:0001915;9.66e-09;3!UBERON:0001982;9.66e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.50e-30,3;UBERON:0004854,6.50e-30,3;UBERON:0009034,6.50e-30,3;UBERON:0002095,6.50e-30,3;UBERON:0004782,6.50e-30,3;UBERON:0003281,6.50e-30,3;UBERON:0009664,6.50e-30,3;UBERON:0002296,6.50e-30,3;UBERON:0005602,6.50e-30,3;UBERON:0001179,6.50e-30,3;UBERON:0006293,6.50e-30,3;UBERON:0004177,1.91e-13,7;UBERON:0005057,1.91e-13,7;UBERON:0000945,6.88e-12,8;UBERON:0010039,6.88e-12,8;UBERON:0010523,9.66e-09,3;UBERON:0001915,9.66e-09,3;UBERON:0001982,9.66e-09,3;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12;UBERON:0003887,3.07e-08,12|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01414721508784,2.84338464974843,0,0,0,0,0,0,0,0,1.13362783106643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,2.93618594685469,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32190474002959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9185524060345,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,46.8908808284262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0,0,0,0,0.981542335574726,0,0,0,1.4097587696978,1.86927875123374,0,0,0,0,0,0,0,0,0.06799149019091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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |||
|TSSclassifier=S | |||
|UniProt=D6RHH1 | |||
|association_with_transcript=15bp_to_ENST00000512201_5end | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_19_at_ARHGAP24_5end | |||
|id=chr4:86525321..86525343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.07e-23;1!CL:0000819;1.07e-23;1!CL:0000945;3.68e-15;24!CL:0002144;9.66e-09;3!CL:0000542;7.11e-08;53!CL:0000236;8.31e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.07e-23,1;CL:0000945,3.68e-15,24;CL:0000826,3.68e-15,24;CL:0000785,1.48e-12,2;CL:0000955,1.48e-12,2;CL:0000818,1.48e-12,2;CL:0000954,1.48e-12,2;CL:0000816,1.48e-12,2;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53;CL:0000817,8.31e-09,3;CL:0002144,9.66e-09,3;CL:0000236,2.52e-07,14;CL:0000838,3.39e-07,52;CL:0002087,7.83e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.04e-13;7!CL:0000954;1.48e-12;2!CL:0000051;7.11e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.07e-23;1!DOID:8675;1.07e-23;1!DOID:12603;1.34e-23;1!DOID:0060058;1.37e-20;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-23,1;DOID:8675,1.07e-23,1;DOID:12603,1.34e-23,1;DOID:0060058,1.47e-20,10;DOID:2531,2.40e-07,51;DOID:0060083,2.40e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-15!115;UBERON:0002298!3.59e-11!8;UBERON:0002133!5.63e-09!2;UBERON:0001875!1.48e-08!2;UBERON:0006514!1.48e-08!2;UBERON:0001870!1.86e-08!2;UBERON:0001049!5.63e-08!57;UBERON:0005068!5.63e-08!57;UBERON:0006241!5.63e-08!57;UBERON:0007135!5.63e-08!57;UBERON:0003075!2.76e-07!86;UBERON:0007284!2.76e-07!86;UBERON:0002346!8.10e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.54e-30;3!UBERON:0004177;2.30e-18;5!UBERON:0005057;2.30e-18;5!UBERON:0010523;9.66e-09;3!UBERON:0001915;9.66e-09;3!UBERON:0001982;9.66e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.50e-30,3;UBERON:0004854,6.50e-30,3;UBERON:0009034,6.50e-30,3;UBERON:0002095,6.50e-30,3;UBERON:0004782,6.50e-30,3;UBERON:0003281,6.50e-30,3;UBERON:0009664,6.50e-30,3;UBERON:0002296,6.50e-30,3;UBERON:0005602,6.50e-30,3;UBERON:0001179,6.50e-30,3;UBERON:0006293,6.50e-30,3;UBERON:0004177,1.91e-13,7;UBERON:0005057,1.91e-13,7;UBERON:0000945,6.88e-12,8;UBERON:0010039,6.88e-12,8;UBERON:0010523,9.66e-09,3;UBERON:0001915,9.66e-09,3;UBERON:0001982,9.66e-09,3;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12;UBERON:0003887,3.07e-08,12 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01414721508784,2.84338464974843,0,0,0,0,0,0,0,0,1.13362783106643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,2.93618594685469,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32190474002959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9185524060345,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,46.8908808284262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0,0,0,0,0.981542335574726,0,0,0,1.4097587696978,1.86927875123374,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31037357147929,0,0,0,0,0,0.80822463617505,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@ARHGAP24 | |||
}} |
Revision as of 12:07, 13 September 2013
Short description: | p19@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_ARHGAP24_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 15bp_to_ENST00000512201_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | D6RHH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.07e-23 | 1 |
lymphocyte of B lineage | 3.68e-15 | 24 |
pro-B cell | 3.68e-15 | 24 |
mature B cell | 1.48e-12 | 2 |
pre-B-II cell | 1.48e-12 | 2 |
transitional stage B cell | 1.48e-12 | 2 |
small pre-B-II cell | 1.48e-12 | 2 |
immature B cell | 1.48e-12 | 2 |
lymphocyte | 1.20e-10 | 53 |
common lymphoid progenitor | 1.20e-10 | 53 |
precursor B cell | 8.31e-09 | 3 |
capillary endothelial cell | 9.66e-09 | 3 |
B cell | 2.52e-07 | 14 |
lymphoid lineage restricted progenitor cell | 3.39e-07 | 52 |
nongranular leukocyte | 7.83e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.50e-30 | 3 |
gastrointestinal system mesentery | 6.50e-30 | 3 |
stomach region | 6.50e-30 | 3 |
mesentery | 6.50e-30 | 3 |
gastrointestinal system serosa | 6.50e-30 | 3 |
mesentery of stomach | 6.50e-30 | 3 |
gut mesentery | 6.50e-30 | 3 |
dorsal mesentery | 6.50e-30 | 3 |
dorsal mesogastrium | 6.50e-30 | 3 |
peritoneal cavity | 6.50e-30 | 3 |
spleen primordium | 6.50e-30 | 3 |
hemopoietic organ | 1.91e-13 | 7 |
immune organ | 1.91e-13 | 7 |
stomach | 6.88e-12 | 8 |
food storage organ | 6.88e-12 | 8 |
microcirculatory vessel | 9.66e-09 | 3 |
endothelium of capillary | 9.66e-09 | 3 |
capillary | 9.66e-09 | 3 |
cavity lining | 3.07e-08 | 12 |
serous membrane | 3.07e-08 | 12 |
intraembryonic coelom | 3.07e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.07e-23 | 1 |
lymphosarcoma | 1.07e-23 | 1 |
acute leukemia | 1.34e-23 | 1 |
lymphoma | 1.47e-20 | 10 |
hematologic cancer | 2.40e-07 | 51 |
immune system cancer | 2.40e-07 | 51 |
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