FFCP PHASE1:Hg19::chr5:112929801..112929814,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64848|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=24721|TSSclassifier=N|UniProt=|association_with_transcript=475bp_to_AL049305_5end|description=CAGE_peak_3_at_YTHDC2_5end|id=chr5:112929801..112929814,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000473;9.23e-07;39!CL:0000234;9.23e-07;39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001950;1.34e-08;20!UBERON:0001871;7.80e-08;6!UBERON:0002619;1.15e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.73e-09,20;UBERON:0001871,1.74e-08,6;UBERON:0002619,4.51e-08,22;UBERON:0000956,6.81e-07,25;UBERON:0000203,6.81e-07,25|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,2.23480547213644,1.74467704820074,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0,0,0.572471974262113,0.547497700291537,0.502170558379211,0.61130724598361,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0.542270404062111,0.568676929949686,0.293600439334847,0,0,0,0.447830948479849,0.32389366601898,0.257575567634187,1.01778767145695,0.755751887377619,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,1.43846196161075,1.2808035326455,0.47296445977717,0,0,0,0.188242339542605,1.09162460023138,1.34834090667051,0.306083892370903,0,0.639337125799041,1.9791078011203,2.99195486432448,1.27867425159808,0.580418477257168,0.56738522469114,1.24564449799115,1.00499466102697,2.60741459210101,1.52032191293582,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,0.425208599930087,0,0.786300418025466,0.901061357049038,0.64290234678832,0,0.79566670879636,0.365328307529268,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.526768169550154,0,1.17903228824749,0.822405995998037,0.83593247695339,1.62961133316795,0.946895611469467,0,0.891283655081389,0,0.664601683750863,1.89562704635511,1.28091319725675,1.69077151827842,1.97325485524411,0.829050053357545,0.869409257205157,0.741432815810302,0.535081656179426,4.18142095219907,0.566546713487831,0,0.34362744548263,1.51811815211702,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,1.33720097891754,0.434473211648397,0,0,0,0.361439152384566,0,0,0,0,0.378139268656271,0.443458794925128,0.527008714158756,0,0,0.741568885568859,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0.825354125820202,0,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,0.860509862246441,1.77334191099179,0,0,0.24666754841716,0,0.404132016209064,0.980771418680752,0.302714855289863,0,0,0.312160076830321,0,0.597794722207204,0.352303495931295,0.647491777472526,0.421352420106746,0.204154171254893,0.982674538494144,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.89694817844431,0.213557388818567,0.635795703478686,1.20036438433761,0.103052529238439,1.03056216018252,0,0.337552664482532,0.292311015483596,2.77677151668526,0.276149695926898,0,0,0.201504196455281,0.169560592310488,0,0,0,0.487894824518382,0.265059536642971,0.69716365721711,0.518305275076852,0.252320850875628,1.45990943630332,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.674338760312407,0.964044119533928,0.55146986366197,0.435758888184812,0.474541238222193,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0,0,0,2.94848165003288,0,1.7658523976586,0,0.171567810298526,0.219500570817251,0,1.00528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0.462985512576611,0.570762456703795,0.790204397959275,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0.335964256397719,0.141775097242386,0.447792613514241,1.16253575405585,0,0,0.352193736052904,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.514137463516618,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.599837947092342,2.43247561282381,1.00451418286425,6.32501818449095,0.718874566474748,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0.224170287987055,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0.167516265334349,3.82763250991898,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.66376689224646,3.39015078714607,1.57702415033935,0.819989904948992,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.620304078368662,0.215714200818617,0.533637789017222,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0.154209693802656,0.532685175939381,0.328508624055237,0.519254429183621,0.464841513839837,0.362578348774867,1.40354529212299,0.460404944679482,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24721 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=475bp_to_AL049305_5end | |||
|description=CAGE_peak_3_at_YTHDC2_5end | |||
|id=chr5:112929801..112929814,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.23e-07;39!CL:0000234;9.23e-07;39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.34e-08;20!UBERON:0001871;7.80e-08;6!UBERON:0002619;1.15e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.73e-09,20;UBERON:0001871,1.74e-08,6;UBERON:0002619,4.51e-08,22;UBERON:0000956,6.81e-07,25;UBERON:0000203,6.81e-07,25 | |||
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| |||
|short_description=p3@YTHDC2 | |||
}} |
Revision as of 12:42, 13 September 2013
Short description: | p3@YTHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_YTHDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 475bp_to_AL049305_5end |
EntrezGene: | YTHDC2 |
HGNC: | 24721 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 4.73e-09 | 20 |
temporal lobe | 1.74e-08 | 6 |
regional part of cerebral cortex | 4.51e-08 | 22 |
cerebral cortex | 6.81e-07 | 25 |
pallium | 6.81e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.