FFCP PHASE1:Mm9::chr16:90220839..90220855,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20655|HGNC=|MCL_coexpression_id=0|UniProt=P08228|association_with_transcript=-131bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end|description=CAGE_peak_4_at_Sod1_5end|id=chr16:90220839..90220855,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.86e-08!63;UBERON:0000955!4.02e-07!50;UBERON:0006238!4.02e-07!50;UBERON:0003056!4.77e-07!49;UBERON:0001049!9.41e-07!52;UBERON:0005068!9.41e-07!52;UBERON:0006241!9.41e-07!52;UBERON:0007135!9.41e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.27e-09,14;UBERON:0003135,2.57e-08,15;UBERON:0003101,7.77e-08,16;UBERON:0000079,7.77e-08,16;UBERON:0004176,2.07e-07,17;UBERON:0009196,2.07e-07,17;UBERON:0009117,2.07e-07,17;UBERON:0000991,4.94e-07,18;UBERON:0005564,4.94e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8004978491859,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0.220868540951614,0,0,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,84.5539408026285,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,2.17425708743405,19.8740704317927,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,1.37016503954128,0,0,0,0,1.55328093525546,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p4@Sod1}} | ||
|EntrezGene=20655 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=P08228 | |||
|association_with_transcript=-131bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end | |||
|description=CAGE_peak_4_at_Sod1_5end | |||
|id=chr16:90220839..90220855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.86e-08!63;UBERON:0000955!4.02e-07!50;UBERON:0006238!4.02e-07!50;UBERON:0003056!4.77e-07!49;UBERON:0001049!9.41e-07!52;UBERON:0005068!9.41e-07!52;UBERON:0006241!9.41e-07!52;UBERON:0007135!9.41e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.27e-09,14;UBERON:0003135,2.57e-08,15;UBERON:0003101,7.77e-08,16;UBERON:0000079,7.77e-08,16;UBERON:0004176,2.07e-07,17;UBERON:0009196,2.07e-07,17;UBERON:0009117,2.07e-07,17;UBERON:0000991,4.94e-07,18;UBERON:0005564,4.94e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8004978491859,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0.220868540951614,0,0,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,84.5539408026285,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,2.17425708743405,19.8740704317927,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,1.37016503954128,0,0,0,0,1.55328093525546,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p4@Sod1 | |||
}} |
Revision as of 13:15, 13 September 2013
Short description: | p4@Sod1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sod1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -131bp_to_ENSMUST00000023707, NM_011434, uc007zvz.1_5end |
EntrezGene: | Sod1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 7.27e-09 | 14 |
male reproductive organ | 2.57e-08 | 15 |
male organism | 7.77e-08 | 16 |
male reproductive system | 7.77e-08 | 16 |
external genitalia | 2.07e-07 | 17 |
indifferent external genitalia | 2.07e-07 | 17 |
indifferent gonad | 2.07e-07 | 17 |
gonad | 4.94e-07 | 18 |
gonad primordium | 4.94e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.