FFCP PHASE1:Mm9::chr17:34424055..34424098,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14960|HGNC=|MCL_coexpression_id=48|UniProt=|association_with_transcript=329bp_to_uc008ccg.1_5end|description=CAGE_peak_3_at_H2-Aa_5end|id=chr17:34424055..34424098,-|ontology_enrichment_celltype=CL:0000553!1.04e-20!6;CL:0000556!1.04e-20!6;CL:0000050!9.16e-14!9;CL:0000049!1.15e-11!19;CL:0000414!3.14e-11!11;CL:0000988!6.07e-11!32;CL:0002032!6.07e-11!32;CL:0000037!6.07e-11!32;CL:0000566!6.07e-11!32;CL:0000837!6.07e-11!32;CL:0000839!1.80e-09!13;CL:0002031!5.69e-09!25;CL:0000763!1.19e-07!16;CL:0002027!1.76e-07!3;CL:0002006!1.76e-07!3;CL:0002024!1.76e-07!3;CL:0002320!3.17e-07!46;CL:0000134!3.17e-07!46|ontology_enrichment_celltype_v019_2=CL:0000553,4.33e-33,6;CL:0000556,4.33e-33,6;CL:0000945,3.06e-23,1;CL:0000236,3.06e-23,1;CL:0000826,3.06e-23,1;CL:0000050,1.96e-22,9;CL:0000839,7.54e-16,13;CL:0002031,9.61e-15,25;CL:0000763,4.65e-13,16;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0000049,3.83e-11,19;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.19e-07!16;UBERON:0002384!3.17e-07!46;UBERON:0002465!5.15e-07!3;UBERON:0002193!7.18e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-13,16;UBERON:0001474,9.57e-10,22;UBERON:0004765,9.57e-10,22;UBERON:0001434,9.57e-10,22;UBERON:0002384,2.15e-08,46;UBERON:0002204,5.85e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.999329285446988,0.809901069559304,0,3.94327706697797,3.83920414096069,8.06340338416257,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,16.4426953936582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p3@H2-Aa}} | ||
|EntrezGene=14960 | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt= | |||
|association_with_transcript=329bp_to_uc008ccg.1_5end | |||
|description=CAGE_peak_3_at_H2-Aa_5end | |||
|id=chr17:34424055..34424098,- | |||
|ontology_enrichment_celltype=CL:0000553!1.04e-20!6;CL:0000556!1.04e-20!6;CL:0000050!9.16e-14!9;CL:0000049!1.15e-11!19;CL:0000414!3.14e-11!11;CL:0000988!6.07e-11!32;CL:0002032!6.07e-11!32;CL:0000037!6.07e-11!32;CL:0000566!6.07e-11!32;CL:0000837!6.07e-11!32;CL:0000839!1.80e-09!13;CL:0002031!5.69e-09!25;CL:0000763!1.19e-07!16;CL:0002027!1.76e-07!3;CL:0002006!1.76e-07!3;CL:0002024!1.76e-07!3;CL:0002320!3.17e-07!46;CL:0000134!3.17e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.33e-33,6;CL:0000556,4.33e-33,6;CL:0000945,3.06e-23,1;CL:0000236,3.06e-23,1;CL:0000826,3.06e-23,1;CL:0000050,1.96e-22,9;CL:0000839,7.54e-16,13;CL:0002031,9.61e-15,25;CL:0000763,4.65e-13,16;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0000049,3.83e-11,19;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.19e-07!16;UBERON:0002384!3.17e-07!46;UBERON:0002465!5.15e-07!3;UBERON:0002193!7.18e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-13,16;UBERON:0001474,9.57e-10,22;UBERON:0004765,9.57e-10,22;UBERON:0001434,9.57e-10,22;UBERON:0002384,2.15e-08,46;UBERON:0002204,5.85e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.999329285446988,0.809901069559304,0,3.94327706697797,3.83920414096069,8.06340338416257,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,16.4426953936582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@H2-Aa | |||
}} |
Revision as of 14:13, 13 September 2013
Short description: | p3@H2-Aa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_H2-Aa_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 329bp_to_uc008ccg.1_5end |
EntrezGene: | H2-Aa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.33e-33 | 6 |
megakaryocyte | 4.33e-33 | 6 |
lymphocyte of B lineage | 3.06e-23 | 1 |
B cell | 3.06e-23 | 1 |
pro-B cell | 3.06e-23 | 1 |
megakaryocyte-erythroid progenitor cell | 1.96e-22 | 9 |
myeloid lineage restricted progenitor cell | 7.54e-16 | 13 |
hematopoietic lineage restricted progenitor cell | 9.61e-15 | 25 |
myeloid cell | 4.65e-13 | 16 |
hematopoietic cell | 1.03e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.03e-11 | 32 |
hematopoietic stem cell | 1.03e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.03e-11 | 32 |
common myeloid progenitor | 3.83e-11 | 19 |
connective tissue cell | 2.15e-08 | 46 |
mesenchymal cell | 2.15e-08 | 46 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.65e-13 | 16 |
bone element | 9.57e-10 | 22 |
skeletal element | 9.57e-10 | 22 |
skeletal system | 9.57e-10 | 22 |
connective tissue | 2.15e-08 | 46 |
musculoskeletal system | 5.85e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.