FFCP PHASE1:Mm9::chr17:34509216..34509223,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34509216..34509223,+|id=chr17:34509216..34509223,+|ontology_enrichment_celltype=CL:0002563!1.43e-23!9;CL:0002251!1.43e-23!9;CL:0000239!7.76e-21!6;CL:0000677!7.76e-21!6;CL:0000212!7.76e-21!6;CL:0000584!7.76e-21!6;CL:0000075!9.04e-18!7;CL:0000066!8.19e-15!25;CL:0002076!1.24e-13!15;CL:0000473!3.32e-11!3;CL:0000627!3.32e-11!3;CL:0000682!3.32e-11!3;CL:0000223!6.67e-10!20|ontology_enrichment_celltype_v019_2=CL:0000239,5.75e-34,6;CL:0000677,5.75e-34,6;CL:0000584,5.75e-34,6;CL:0002563,4.45e-32,9;CL:0002251,4.45e-32,9;CL:0000075,3.76e-29,7;CL:0000066,1.69e-25,25;CL:0000682,1.13e-24,3;CL:0002076,3.06e-19,15;CL:0000223,2.09e-14,20;CL:0000473,5.82e-11,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.10e-26!43;UBERON:0000344!3.36e-25!15;UBERON:0001242!1.41e-24!13;UBERON:0000060!1.41e-24!13;UBERON:0001262!1.41e-24!13;UBERON:0004786!1.41e-24!13;UBERON:0003350!1.43e-23!9;UBERON:0004808!1.43e-23!9;UBERON:0001277!1.43e-23!9;UBERON:0005409!1.77e-20!59;UBERON:0000485!4.68e-19!11;UBERON:0004923!5.85e-15!24;UBERON:0001007!4.82e-09!128;UBERON:0001555!4.82e-09!128;UBERON:0007026!4.82e-09!128;UBERON:0004119!7.80e-09!130;UBERON:0000925!7.80e-09!130;UBERON:0006595!7.80e-09!130;UBERON:0004921!2.90e-08!126;UBERON:0004185!2.90e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.45e-32,9;UBERON:0004808,4.45e-32,9;UBERON:0001277,4.45e-32,9;UBERON:0001242,8.67e-30,13;UBERON:0001262,8.67e-30,13;UBERON:0004786,8.67e-30,13;UBERON:0000485,3.00e-26,11;UBERON:0000344,8.56e-26,15;UBERON:0004923,4.96e-16,24;UBERON:0000160,5.07e-16,31;UBERON:0005409,2.13e-10,47|phase1_expression=0,7.32848356042658,1.81999695755814,9.37639055051173,8.01433167914156,1.51091344720701,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,1.72269589234506,2.58457197695445,1.72376986148711,0,0.252030129759931,0,0,0,0,0.288851619751275,0,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0,0,0,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:34509216..34509223,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:34509216..34509223,+ | |||
|id=chr17:34509216..34509223,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.43e-23!9;CL:0002251!1.43e-23!9;CL:0000239!7.76e-21!6;CL:0000677!7.76e-21!6;CL:0000212!7.76e-21!6;CL:0000584!7.76e-21!6;CL:0000075!9.04e-18!7;CL:0000066!8.19e-15!25;CL:0002076!1.24e-13!15;CL:0000473!3.32e-11!3;CL:0000627!3.32e-11!3;CL:0000682!3.32e-11!3;CL:0000223!6.67e-10!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.75e-34,6;CL:0000677,5.75e-34,6;CL:0000584,5.75e-34,6;CL:0002563,4.45e-32,9;CL:0002251,4.45e-32,9;CL:0000075,3.76e-29,7;CL:0000066,1.69e-25,25;CL:0000682,1.13e-24,3;CL:0002076,3.06e-19,15;CL:0000223,2.09e-14,20;CL:0000473,5.82e-11,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.10e-26!43;UBERON:0000344!3.36e-25!15;UBERON:0001242!1.41e-24!13;UBERON:0000060!1.41e-24!13;UBERON:0001262!1.41e-24!13;UBERON:0004786!1.41e-24!13;UBERON:0003350!1.43e-23!9;UBERON:0004808!1.43e-23!9;UBERON:0001277!1.43e-23!9;UBERON:0005409!1.77e-20!59;UBERON:0000485!4.68e-19!11;UBERON:0004923!5.85e-15!24;UBERON:0001007!4.82e-09!128;UBERON:0001555!4.82e-09!128;UBERON:0007026!4.82e-09!128;UBERON:0004119!7.80e-09!130;UBERON:0000925!7.80e-09!130;UBERON:0006595!7.80e-09!130;UBERON:0004921!2.90e-08!126;UBERON:0004185!2.90e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.45e-32,9;UBERON:0004808,4.45e-32,9;UBERON:0001277,4.45e-32,9;UBERON:0001242,8.67e-30,13;UBERON:0001262,8.67e-30,13;UBERON:0004786,8.67e-30,13;UBERON:0000485,3.00e-26,11;UBERON:0000344,8.56e-26,15;UBERON:0004923,4.96e-16,24;UBERON:0000160,5.07e-16,31;UBERON:0005409,2.13e-10,47 | |||
|phase1_expression=0,7.32848356042658,1.81999695755814,9.37639055051173,8.01433167914156,1.51091344720701,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,1.72269589234506,2.58457197695445,1.72376986148711,0,0.252030129759931,0,0,0,0,0.288851619751275,0,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.58670339998127,0,0,0,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:34509216..34509223,+ | |||
}} |
Revision as of 14:14, 13 September 2013
Short description: | p@chr17:34509216..34509223, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34509216..34509223, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.75e-34 | 6 |
gut absorptive cell | 5.75e-34 | 6 |
enterocyte | 5.75e-34 | 6 |
intestinal epithelial cell | 4.45e-32 | 9 |
epithelial cell of alimentary canal | 4.45e-32 | 9 |
columnar/cuboidal epithelial cell | 3.76e-29 | 7 |
epithelial cell | 1.69e-25 | 25 |
M cell of gut | 1.13e-24 | 3 |
endo-epithelial cell | 3.06e-19 | 15 |
endodermal cell | 2.09e-14 | 20 |
defensive cell | 5.82e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.45e-32 | 9 |
gastrointestinal system epithelium | 4.45e-32 | 9 |
intestinal epithelium | 4.45e-32 | 9 |
intestinal mucosa | 8.67e-30 | 13 |
wall of intestine | 8.67e-30 | 13 |
gastrointestinal system mucosa | 8.67e-30 | 13 |
simple columnar epithelium | 3.00e-26 | 11 |
mucosa | 8.56e-26 | 15 |
organ component layer | 4.96e-16 | 24 |
intestine | 5.07e-16 | 31 |
gastrointestinal system | 2.13e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.