FFCP PHASE1:Mm9::chr17:36282872..36282883,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=88|UniProt=|association_with_transcript=-4bp_to_ENSMUST00000174094_5end|description=CAGE_peak_2_at_ENSMUST00000174094_5end|id=chr17:36282872..36282883,-|ontology_enrichment_celltype=CL:0002563!6.03e-14!9;CL:0002251!6.03e-14!9;CL:0000239!4.95e-13!6;CL:0000677!4.95e-13!6;CL:0000212!4.95e-13!6;CL:0000584!4.95e-13!6;CL:0000075!4.93e-11!7;CL:0000066!4.45e-08!25;CL:0002076!9.96e-08!15;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,3.91e-17,6;CL:0000677,3.91e-17,6;CL:0000584,3.91e-17,6;CL:0000075,1.17e-14,7;CL:0000682,7.86e-13,3;CL:0002563,2.38e-11,9;CL:0002251,2.38e-11,9;CL:0000066,2.00e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.26e-24!15;UBERON:0000160!2.02e-24!43;UBERON:0001242!3.79e-21!13;UBERON:0000060!3.79e-21!13;UBERON:0001262!3.79e-21!13;UBERON:0004786!3.79e-21!13;UBERON:0005409!5.70e-16!59;UBERON:0004923!5.22e-14!24;UBERON:0003350!6.03e-14!9;UBERON:0004808!6.03e-14!9;UBERON:0001277!6.03e-14!9;UBERON:0001007!9.77e-14!128;UBERON:0001555!9.77e-14!128;UBERON:0007026!9.77e-14!128;UBERON:0004119!2.20e-13!130;UBERON:0000925!2.20e-13!130;UBERON:0006595!2.20e-13!130;UBERON:0004921!5.55e-12!126;UBERON:0004185!5.55e-12!126;UBERON:0000485!4.09e-11!11;UBERON:0000331!7.08e-07!3;UBERON:0002116!7.08e-07!3;UBERON:0001204!7.08e-07!3;UBERON:0001168!7.08e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.10e-38,31;UBERON:0000344,5.61e-25,15;UBERON:0005409,5.51e-24,47;UBERON:0001242,4.86e-19,13;UBERON:0001262,4.86e-19,13;UBERON:0004786,4.86e-19,13;UBERON:0004923,5.28e-15,24;UBERON:0003350,2.38e-11,9;UBERON:0004808,2.38e-11,9;UBERON:0001277,2.38e-11,9;UBERON:0001007,4.30e-10,116;UBERON:0001555,4.30e-10,116;UBERON:0007026,4.30e-10,116;UBERON:0004119,7.32e-10,118;UBERON:0000925,7.32e-10,118;UBERON:0006595,7.32e-10,118;UBERON:0002108,1.35e-09,4;UBERON:0000485,3.07e-09,11;UBERON:0001962,3.51e-08,2;UBERON:0001961,3.51e-08,2;UBERON:0001744,3.51e-08,2;UBERON:0004921,5.30e-08,114|phase1_expression=0,9.77131141390211,5.91499011206397,25.1045295384669,30.5546395267272,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.14704640533585,6.31655160526522,6.46142994238612,3.23206849028834,3.80046838912748,4.78857246543868,0.443461021310609,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.43785736662608,0,0,0,0,0.444756087689741,0.380451252225118,2.37264530772256,0.658795818896044,1.00534083520108,1.79060824837036,1.36474860983384,2.69645822596266,3.8904848977445,4.97853183135918,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0.302899349844443,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p2@ENSMUST00000174094}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENSMUST00000174094_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000174094_5end | |||
|id=chr17:36282872..36282883,- | |||
|ontology_enrichment_celltype=CL:0002563!6.03e-14!9;CL:0002251!6.03e-14!9;CL:0000239!4.95e-13!6;CL:0000677!4.95e-13!6;CL:0000212!4.95e-13!6;CL:0000584!4.95e-13!6;CL:0000075!4.93e-11!7;CL:0000066!4.45e-08!25;CL:0002076!9.96e-08!15;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.91e-17,6;CL:0000677,3.91e-17,6;CL:0000584,3.91e-17,6;CL:0000075,1.17e-14,7;CL:0000682,7.86e-13,3;CL:0002563,2.38e-11,9;CL:0002251,2.38e-11,9;CL:0000066,2.00e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.26e-24!15;UBERON:0000160!2.02e-24!43;UBERON:0001242!3.79e-21!13;UBERON:0000060!3.79e-21!13;UBERON:0001262!3.79e-21!13;UBERON:0004786!3.79e-21!13;UBERON:0005409!5.70e-16!59;UBERON:0004923!5.22e-14!24;UBERON:0003350!6.03e-14!9;UBERON:0004808!6.03e-14!9;UBERON:0001277!6.03e-14!9;UBERON:0001007!9.77e-14!128;UBERON:0001555!9.77e-14!128;UBERON:0007026!9.77e-14!128;UBERON:0004119!2.20e-13!130;UBERON:0000925!2.20e-13!130;UBERON:0006595!2.20e-13!130;UBERON:0004921!5.55e-12!126;UBERON:0004185!5.55e-12!126;UBERON:0000485!4.09e-11!11;UBERON:0000331!7.08e-07!3;UBERON:0002116!7.08e-07!3;UBERON:0001204!7.08e-07!3;UBERON:0001168!7.08e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.10e-38,31;UBERON:0000344,5.61e-25,15;UBERON:0005409,5.51e-24,47;UBERON:0001242,4.86e-19,13;UBERON:0001262,4.86e-19,13;UBERON:0004786,4.86e-19,13;UBERON:0004923,5.28e-15,24;UBERON:0003350,2.38e-11,9;UBERON:0004808,2.38e-11,9;UBERON:0001277,2.38e-11,9;UBERON:0001007,4.30e-10,116;UBERON:0001555,4.30e-10,116;UBERON:0007026,4.30e-10,116;UBERON:0004119,7.32e-10,118;UBERON:0000925,7.32e-10,118;UBERON:0006595,7.32e-10,118;UBERON:0002108,1.35e-09,4;UBERON:0000485,3.07e-09,11;UBERON:0001962,3.51e-08,2;UBERON:0001961,3.51e-08,2;UBERON:0001744,3.51e-08,2;UBERON:0004921,5.30e-08,114 | |||
|phase1_expression=0,9.77131141390211,5.91499011206397,25.1045295384669,30.5546395267272,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.14704640533585,6.31655160526522,6.46142994238612,3.23206849028834,3.80046838912748,4.78857246543868,0.443461021310609,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.43785736662608,0,0,0,0,0.444756087689741,0.380451252225118,2.37264530772256,0.658795818896044,1.00534083520108,1.79060824837036,1.36474860983384,2.69645822596266,3.8904848977445,4.97853183135918,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0.302899349844443,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@ENSMUST00000174094 | |||
}} |
Revision as of 14:28, 13 September 2013
Short description: | p2@ENSMUST00000174094 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000174094_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | -4bp_to_ENSMUST00000174094_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.91e-17 | 6 |
gut absorptive cell | 3.91e-17 | 6 |
enterocyte | 3.91e-17 | 6 |
columnar/cuboidal epithelial cell | 1.17e-14 | 7 |
M cell of gut | 7.86e-13 | 3 |
intestinal epithelial cell | 2.38e-11 | 9 |
epithelial cell of alimentary canal | 2.38e-11 | 9 |
epithelial cell | 2.00e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.10e-38 | 31 |
mucosa | 5.61e-25 | 15 |
gastrointestinal system | 5.51e-24 | 47 |
intestinal mucosa | 4.86e-19 | 13 |
wall of intestine | 4.86e-19 | 13 |
gastrointestinal system mucosa | 4.86e-19 | 13 |
organ component layer | 5.28e-15 | 24 |
epithelium of mucosa | 2.38e-11 | 9 |
gastrointestinal system epithelium | 2.38e-11 | 9 |
intestinal epithelium | 2.38e-11 | 9 |
digestive system | 4.30e-10 | 116 |
digestive tract | 4.30e-10 | 116 |
primitive gut | 4.30e-10 | 116 |
endoderm-derived structure | 7.32e-10 | 118 |
endoderm | 7.32e-10 | 118 |
presumptive endoderm | 7.32e-10 | 118 |
small intestine | 1.35e-09 | 4 |
simple columnar epithelium | 3.07e-09 | 11 |
gut-associated lymphoid tissue | 3.51e-08 | 2 |
mucosa-associated lymphoid tissue | 3.51e-08 | 2 |
lymphoid tissue | 3.51e-08 | 2 |
subdivision of digestive tract | 5.30e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.