FFCP PHASE1:Hg19::chr5:169816392..169816413,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3779|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6285|TSSclassifier=N|UniProt=Q16558|association_with_transcript=224bp_to_ENST00000521859,NM_004137,uc003maq.1,uc003mar.2_5end|coexpression_cluster_id=C48|description=CAGE_peak_4_at_KCNMB1_5end|id=chr5:169816392..169816413,-|ontology_enrichment_celltype=CL:0002594!4.03e-07!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;1.29e-10;2!UBERON:0006603;4.21e-09;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.84e-43!115;UBERON:0003135!2.08e-07!11;UBERON:0001310!4.03e-07!4|ontology_enrichment_uberon_v019=UBERON:0004921;4.60e-19;33!UBERON:0000160;7.16e-16;17!UBERON:0005409;2.31e-15;22!UBERON:0003135;7.54e-15;11!UBERON:0006947;8.80e-15;3!UBERON:0004054;8.80e-15;3!UBERON:0005904;3.27e-11;4!UBERON:0000059;6.32e-11;11!UBERON:0001829;6.55e-10;2!UBERON:0003101;1.14e-09;22!UBERON:0000079;1.14e-09;22!UBERON:0002108;5.11e-09;4!UBERON:0001155;6.06e-09;9!UBERON:0001555;2.81e-08;54!UBERON:0001041;3.36e-08;14!UBERON:0004175;1.18e-07;21!UBERON:0001044;2.30e-07;6!UBERON:0003293;2.30e-07;6!UBERON:0003294;2.30e-07;6!UBERON:0010047;2.30e-07;6!UBERON:0003408;2.30e-07;6!UBERON:0000167;2.30e-07;6!UBERON:0003978;4.21e-07;3!UBERON:0000946;4.21e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-24,114;UBERON:0000160,6.95e-16,17;UBERON:0003135,7.27e-15,11;UBERON:0006947,8.01e-15,3;UBERON:0004054,8.01e-15,3;UBERON:0005409,2.05e-13,25;UBERON:0005904,3.05e-11,4;UBERON:0000059,5.94e-11,11;UBERON:0001829,6.70e-10,2;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0002108,5.33e-09,4;UBERON:0001155,6.00e-09,9;UBERON:0003133,5.40e-08,48;UBERON:0004921,9.01e-08,118;UBERON:0005156,1.37e-07,59;UBERON:0000990,1.37e-07,59;UBERON:0001044,2.52e-07,6;UBERON:0003293,2.52e-07,6;UBERON:0003294,2.52e-07,6;UBERON:0010047,2.52e-07,6;UBERON:0000167,2.52e-07,6;UBERON:0003978,4.48e-07,3;UBERON:0009751,4.48e-07,3;UBERON:0000946,4.48e-07,3;UBERON:0002523,4.48e-07,3;UBERON:0005983,4.48e-07,3;UBERON:0002165,4.48e-07,3;UBERON:0002062,4.48e-07,3;UBERON:0007280,4.48e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.656804715599566,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0.818718450173537,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,1.54911749049875,0.281695602532241,0,0,1.426684205925,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,1.22896305723383,1.78940886313933,0.500547425135725,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,16.9360790013409,3.31540698637377,0,0.306806047506464,0.369254416383208,0,0,0,0,32.0591068320034,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.87754158861589,0,0,9.69573257147843,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,11.9431431729421,10.8802804339107,10.3875124638716,0,0,0,0.202203398942031,0,0,0,0,0,2.36750641709634,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,15.4212536216587,0,2.48578814858586,0,0,0.0633107959558787,0,0,16.4358805949301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,7.10397314436219,0,0.399358000997982,0,0.446342914883745,2.68733889946905,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0.0607495566580247,0,0.709251365692784,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.961086713109252,0.628817220398664,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53318401491205,0.9300538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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3779 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6285 | |||
|TSSclassifier=N | |||
|UniProt=Q16558 | |||
|association_with_transcript=224bp_to_ENST00000521859,NM_004137,uc003maq.1,uc003mar.2_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_4_at_KCNMB1_5end | |||
|id=chr5:169816392..169816413,- | |||
|ontology_enrichment_celltype=CL:0002594!4.03e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.29e-10;2!UBERON:0006603;4.21e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.84e-43!115;UBERON:0003135!2.08e-07!11;UBERON:0001310!4.03e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.60e-19;33!UBERON:0000160;7.16e-16;17!UBERON:0005409;2.31e-15;22!UBERON:0003135;7.54e-15;11!UBERON:0006947;8.80e-15;3!UBERON:0004054;8.80e-15;3!UBERON:0005904;3.27e-11;4!UBERON:0000059;6.32e-11;11!UBERON:0001829;6.55e-10;2!UBERON:0003101;1.14e-09;22!UBERON:0000079;1.14e-09;22!UBERON:0002108;5.11e-09;4!UBERON:0001155;6.06e-09;9!UBERON:0001555;2.81e-08;54!UBERON:0001041;3.36e-08;14!UBERON:0004175;1.18e-07;21!UBERON:0001044;2.30e-07;6!UBERON:0003293;2.30e-07;6!UBERON:0003294;2.30e-07;6!UBERON:0010047;2.30e-07;6!UBERON:0003408;2.30e-07;6!UBERON:0000167;2.30e-07;6!UBERON:0003978;4.21e-07;3!UBERON:0000946;4.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-24,114;UBERON:0000160,6.95e-16,17;UBERON:0003135,7.27e-15,11;UBERON:0006947,8.01e-15,3;UBERON:0004054,8.01e-15,3;UBERON:0005409,2.05e-13,25;UBERON:0005904,3.05e-11,4;UBERON:0000059,5.94e-11,11;UBERON:0001829,6.70e-10,2;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0002108,5.33e-09,4;UBERON:0001155,6.00e-09,9;UBERON:0003133,5.40e-08,48;UBERON:0004921,9.01e-08,118;UBERON:0005156,1.37e-07,59;UBERON:0000990,1.37e-07,59;UBERON:0001044,2.52e-07,6;UBERON:0003293,2.52e-07,6;UBERON:0003294,2.52e-07,6;UBERON:0010047,2.52e-07,6;UBERON:0000167,2.52e-07,6;UBERON:0003978,4.48e-07,3;UBERON:0009751,4.48e-07,3;UBERON:0000946,4.48e-07,3;UBERON:0002523,4.48e-07,3;UBERON:0005983,4.48e-07,3;UBERON:0002165,4.48e-07,3;UBERON:0002062,4.48e-07,3;UBERON:0007280,4.48e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.656804715599566,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0.818718450173537,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,1.54911749049875,0.281695602532241,0,0,1.426684205925,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,1.22896305723383,1.78940886313933,0.500547425135725,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,16.9360790013409,3.31540698637377,0,0.306806047506464,0.369254416383208,0,0,0,0,32.0591068320034,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.87754158861589,0,0,9.69573257147843,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,11.9431431729421,10.8802804339107,10.3875124638716,0,0,0,0.202203398942031,0,0,0,0,0,2.36750641709634,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,15.4212536216587,0,2.48578814858586,0,0,0.0633107959558787,0,0,16.4358805949301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,7.10397314436219,0,0.399358000997982,0,0.446342914883745,2.68733889946905,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0.0607495566580247,0,0.709251365692784,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.961086713109252,0.628817220398664,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53318401491205,0.930053882193542,0.163565394255844,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.795664888465099,2.85799247727178,0,0.781514011233092,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,1.64477330057155,9.42801238939659,0,0,0,0,0,0,0.266107110487916,0,0,0.203909198930495,0.0657727735628491,0,0,14.3642359916441,0,0,3.65263488203798,0,0,3.00201485541957,0,0,0,0,0,0,0,3.01159151174194,0,0,8.46774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,5.47936522566407,3.0598338470554,0,30.6435402192382,0,0.196308467114945,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,4.3820183294791,2.2936464170227,0.143339583151451,0,0,0,2.645134202577,0,0,0,0,0,0,0.203977659483963,0,0,0,3.25848402338429,1.60778478093707,0,0,0.639701945702943,0,0,0.124149428591716,0,0.190941474834495,0,0.435433495793923,0.342233301085281,0.5388164241167,3.87299909120452,0.665320713092027,0,0,0,0,7.03922827210363,10.2682813113608,8.13792356631477,3.32878387092756,0.603821380773079,0 | |||
|short_description=p4@KCNMB1 | |||
}} |
Revision as of 14:46, 13 September 2013
Short description: | p4@KCNMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KCNMB1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 224bp_to_ENST00000521859, NM_004137, uc003maq.1, uc003mar.2_5end |
EntrezGene: | KCNMB1 |
HGNC: | 6285 |
UniProt: | Q16558 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.84e-24 | 114 |
intestine | 6.95e-16 | 17 |
male reproductive organ | 7.27e-15 | 11 |
male genital duct | 8.01e-15 | 3 |
internal male genitalia | 8.01e-15 | 3 |
gastrointestinal system | 2.05e-13 | 25 |
duct of male reproductive system | 3.05e-11 | 4 |
large intestine | 5.94e-11 | 11 |
major salivary gland | 6.70e-10 | 2 |
male organism | 1.12e-09 | 22 |
male reproductive system | 1.12e-09 | 22 |
small intestine | 5.33e-09 | 4 |
colon | 6.00e-09 | 9 |
reproductive organ | 5.40e-08 | 48 |
subdivision of digestive tract | 9.01e-08 | 118 |
reproductive structure | 1.37e-07 | 59 |
reproductive system | 1.37e-07 | 59 |
saliva-secreting gland | 2.52e-07 | 6 |
gland of oral region | 2.52e-07 | 6 |
gland of foregut | 2.52e-07 | 6 |
oral gland | 2.52e-07 | 6 |
oral cavity | 2.52e-07 | 6 |
valve | 4.48e-07 | 3 |
cardiac mesenchyme | 4.48e-07 | 3 |
cardial valve | 4.48e-07 | 3 |
tunica intima | 4.48e-07 | 3 |
heart layer | 4.48e-07 | 3 |
endocardium | 4.48e-07 | 3 |
endocardial cushion | 4.48e-07 | 3 |
presumptive endocardium | 4.48e-07 | 3 |
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