FFCP PHASE1:Hg19::chr5:179757790..179757847,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9945|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4242|TSSclassifier=S|UniProt=|association_with_transcript=86bp_to_ENST00000518185_5end|coexpression_cluster_id=C221|description=CAGE_peak_2_at_GFPT2_5end|id=chr5:179757790..179757847,-|ontology_enrichment_celltype=CL:0000055!7.60e-23!180;CL:0000680!3.51e-13!57;CL:0000056!3.51e-13!57;CL:0000355!3.51e-13!57;CL:0000187!4.24e-13!54;CL:0000393!7.59e-13!60;CL:0000211!7.59e-13!60;CL:0000359!4.09e-12!32;CL:0000183!1.15e-11!59;CL:0000192!1.11e-10!42;CL:0000514!1.11e-10!42;CL:0000222!9.53e-09!119;CL:0000057!3.27e-08!75;CL:0000077!1.67e-07!19;CL:0002494!8.33e-07!16|ontology_enrichment_celltype_v019=CL:0000359;9.10e-16;32!CL:0000192;5.06e-09;43!CL:0000569;4.70e-07;4!CL:0002539;4.71e-07;10!CL:0002593;5.63e-07;2!CL:0002097;7.76e-07;2!CL:0002594;8.47e-07;4|ontology_enrichment_celltype_v019_2=CL:0000359,1.39e-16,32;CL:0000192,2.18e-11,43;CL:0000514,2.18e-11,43;CL:0000187,2.60e-09,55;CL:0000680,1.23e-08,58;CL:0000056,1.23e-08,58;CL:0000355,1.23e-08,58;CL:0000393,4.95e-08,61;CL:0000211,4.95e-08,61;CL:0002539,4.34e-07,10;CL:0000569,5.14e-07,4;CL:0000011,5.14e-07,4;CL:0002593,5.67e-07,2;CL:0002594,6.59e-07,4;CL:0002097,9.55e-07,2|ontology_enrichment_development_v019=CL:0000514;5.06e-09;43!CL:0000011;4.70e-07;4|ontology_enrichment_disease=DOID:2394!3.53e-08!14|ontology_enrichment_disease_v019=DOID:2394;7.05e-09;14|ontology_enrichment_disease_v019_2=DOID:2394,6.36e-09,14|ontology_enrichment_uberon=UBERON:0001134!4.42e-12!61;UBERON:0002036!4.42e-12!61;UBERON:0003082!4.42e-12!61;UBERON:0002385!5.37e-12!63;UBERON:0001015!5.37e-12!63;UBERON:0000383!5.37e-12!63;UBERON:0004290!1.30e-11!70;UBERON:0000486!1.29e-10!82;UBERON:0000914!2.29e-10!83;UBERON:0002329!2.29e-10!83;UBERON:0003077!2.29e-10!83;UBERON:0003059!2.29e-10!83;UBERON:0007282!2.29e-10!83;UBERON:0009618!2.29e-10!83;UBERON:0007285!2.29e-10!83;UBERON:0004872!2.44e-09!84;UBERON:0001637!2.56e-09!42;UBERON:0003509!2.56e-09!42;UBERON:0004572!2.56e-09!42;UBERON:0005256!1.45e-08!143;UBERON:0004535!2.86e-07!110;UBERON:0001009!4.07e-07!113;UBERON:0002049!6.48e-07!79;UBERON:0007798!6.48e-07!79;UBERON:0000948!7.62e-07!24;UBERON:0005498!7.62e-07!24;UBERON:0004140!7.62e-07!24;UBERON:0009881!7.62e-07!24;UBERON:0004141!7.62e-07!24;UBERON:0003084!7.62e-07!24;UBERON:0007005!7.62e-07!24;UBERON:0004139!7.62e-07!24;UBERON:0004291!7.62e-07!24|ontology_enrichment_uberon_v019=UBERON:0001637;1.24e-10;42!UBERON:0003509;1.24e-10;42!UBERON:0004572;1.24e-10;42!UBERON:0004573;7.97e-09;33!UBERON:0004571;7.97e-09;33!UBERON:0000992;3.07e-07;13!UBERON:0004237;4.71e-07;10!UBERON:0004695;4.71e-07;10!UBERON:0002111;4.71e-07;10!UBERON:0004178;4.71e-07;10!UBERON:0002456;5.63e-07;2!UBERON:0001310;8.47e-07;4!UBERON:0002119;8.47e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.97e-15,42;UBERON:0003509,2.97e-15,42;UBERON:0004572,2.97e-15,42;UBERON:0004872,1.78e-13,83;UBERON:0004573,8.30e-10,33;UBERON:0004571,8.30e-10,33;UBERON:0007500,1.20e-09,59;UBERON:0001981,1.20e-09,59;UBERON:0004537,1.20e-09,59;UBERON:0006965,1.20e-09,59;UBERON:0004535,1.48e-09,109;UBERON:0002049,3.59e-09,78;UBERON:0007798,3.59e-09,78;UBERON:0001009,3.85e-09,112;UBERON:0003914,7.09e-09,117;UBERON:0000055,7.57e-08,68;UBERON:0001134,7.64e-08,62;UBERON:0002036,7.64e-08,62;UBERON:0003082,7.64e-08,62;UBERON:0002385,1.74e-07,64;UBERON:0001015,1.74e-07,64;UBERON:0000383,1.74e-07,64;UBERON:0000992,2.28e-07,13;UBERON:0002329,2.57e-07,71;UBERON:0003059,2.57e-07,71;UBERON:0007282,2.57e-07,71;UBERON:0004290,2.57e-07,71;UBERON:0009618,2.57e-07,71;UBERON:0003077,3.66e-07,72;UBERON:0007285,3.66e-07,72;UBERON:0004237,4.34e-07,10;UBERON:0004695,4.34e-07,10;UBERON:0002111,4.34e-07,10;UBERON:0004178,4.34e-07,10;UBERON:0002119,4.63e-07,4;UBERON:0007524,5.17e-07,73;UBERON:0002456,5.67e-07,2;UBERON:0001310,6.59e-07,4|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0.866364470720326,0.331397375727916,0,4.82155622419182,1.46062018077475,1.46379839637152,0.492484232307152,0.612002073732759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,1.5905718941022,0,0.472674085820339,1.10864698731282,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.529636723252875,1.14734648299525,0.709336764396714,0,2.1349799145941,3.20667812942308,0.933633106199299,0.538842688278752,0.326923806226917,0.605429710579726,1.15235184896,0,0,1.1409436430889,0.149448680551801,0.23486899728753,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,1.36118619792025,0,0.427114777637135,0.635795703478686,0.600182192168805,0.309157587715317,0.515281080091258,0,0.168776332241266,0.194874010322397,0.504867548488229,0.184099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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9945 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4242 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=86bp_to_ENST00000518185_5end | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_2_at_GFPT2_5end | |||
|id=chr5:179757790..179757847,- | |||
|ontology_enrichment_celltype=CL:0000055!7.60e-23!180;CL:0000680!3.51e-13!57;CL:0000056!3.51e-13!57;CL:0000355!3.51e-13!57;CL:0000187!4.24e-13!54;CL:0000393!7.59e-13!60;CL:0000211!7.59e-13!60;CL:0000359!4.09e-12!32;CL:0000183!1.15e-11!59;CL:0000192!1.11e-10!42;CL:0000514!1.11e-10!42;CL:0000222!9.53e-09!119;CL:0000057!3.27e-08!75;CL:0000077!1.67e-07!19;CL:0002494!8.33e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.10e-16;32!CL:0000192;5.06e-09;43!CL:0000569;4.70e-07;4!CL:0002539;4.71e-07;10!CL:0002593;5.63e-07;2!CL:0002097;7.76e-07;2!CL:0002594;8.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.39e-16,32;CL:0000192,2.18e-11,43;CL:0000514,2.18e-11,43;CL:0000187,2.60e-09,55;CL:0000680,1.23e-08,58;CL:0000056,1.23e-08,58;CL:0000355,1.23e-08,58;CL:0000393,4.95e-08,61;CL:0000211,4.95e-08,61;CL:0002539,4.34e-07,10;CL:0000569,5.14e-07,4;CL:0000011,5.14e-07,4;CL:0002593,5.67e-07,2;CL:0002594,6.59e-07,4;CL:0002097,9.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;5.06e-09;43!CL:0000011;4.70e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!3.53e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.05e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.36e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.42e-12!61;UBERON:0002036!4.42e-12!61;UBERON:0003082!4.42e-12!61;UBERON:0002385!5.37e-12!63;UBERON:0001015!5.37e-12!63;UBERON:0000383!5.37e-12!63;UBERON:0004290!1.30e-11!70;UBERON:0000486!1.29e-10!82;UBERON:0000914!2.29e-10!83;UBERON:0002329!2.29e-10!83;UBERON:0003077!2.29e-10!83;UBERON:0003059!2.29e-10!83;UBERON:0007282!2.29e-10!83;UBERON:0009618!2.29e-10!83;UBERON:0007285!2.29e-10!83;UBERON:0004872!2.44e-09!84;UBERON:0001637!2.56e-09!42;UBERON:0003509!2.56e-09!42;UBERON:0004572!2.56e-09!42;UBERON:0005256!1.45e-08!143;UBERON:0004535!2.86e-07!110;UBERON:0001009!4.07e-07!113;UBERON:0002049!6.48e-07!79;UBERON:0007798!6.48e-07!79;UBERON:0000948!7.62e-07!24;UBERON:0005498!7.62e-07!24;UBERON:0004140!7.62e-07!24;UBERON:0009881!7.62e-07!24;UBERON:0004141!7.62e-07!24;UBERON:0003084!7.62e-07!24;UBERON:0007005!7.62e-07!24;UBERON:0004139!7.62e-07!24;UBERON:0004291!7.62e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.24e-10;42!UBERON:0003509;1.24e-10;42!UBERON:0004572;1.24e-10;42!UBERON:0004573;7.97e-09;33!UBERON:0004571;7.97e-09;33!UBERON:0000992;3.07e-07;13!UBERON:0004237;4.71e-07;10!UBERON:0004695;4.71e-07;10!UBERON:0002111;4.71e-07;10!UBERON:0004178;4.71e-07;10!UBERON:0002456;5.63e-07;2!UBERON:0001310;8.47e-07;4!UBERON:0002119;8.47e-07;4 | |||
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| |||
|short_description=p2@GFPT2 | |||
}} |
Revision as of 15:14, 13 September 2013
Short description: | p2@GFPT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GFPT2_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | 86bp_to_ENST00000518185_5end |
EntrezGene: | GFPT2 |
HGNC: | 4242 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.39e-16 | 32 |
smooth muscle cell | 2.18e-11 | 43 |
smooth muscle myoblast | 2.18e-11 | 43 |
muscle cell | 2.60e-09 | 55 |
muscle precursor cell | 1.23e-08 | 58 |
myoblast | 1.23e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-08 | 58 |
electrically responsive cell | 4.95e-08 | 61 |
electrically active cell | 4.95e-08 | 61 |
aortic smooth muscle cell | 4.34e-07 | 10 |
cardiac mesenchymal cell | 5.14e-07 | 4 |
migratory trunk neural crest cell | 5.14e-07 | 4 |
smooth muscle cell of the internal thoracic artery | 5.67e-07 | 2 |
smooth muscle cell of the umbilical artery | 6.59e-07 | 4 |
cortical cell of adrenal gland | 9.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.36e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.