FFCP PHASE1:Mm9::chr17:80016202..80016213,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3116|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:80016202..80016213,+|id=chr17:80016202..80016213,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,8.29e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!2.14e-24!27;UBERON:0002369!7.22e-19!7;UBERON:0006858!7.22e-19!7;UBERON:0009569!1.63e-17!66;UBERON:0002048!3.68e-16!14;UBERON:0000117!3.68e-16!14;UBERON:0000171!3.68e-16!14;UBERON:0000170!3.68e-16!14;UBERON:0005597!3.68e-16!14;UBERON:0000118!3.68e-16!14;UBERON:0005153!5.92e-13!17;UBERON:0005178!5.92e-13!17;UBERON:0005181!5.92e-13!17;UBERON:0002224!5.92e-13!17;UBERON:0000915!5.92e-13!17;UBERON:0008947!5.92e-13!17;UBERON:0003258!5.92e-13!17;UBERON:0002342!7.43e-13!10;UBERON:0005062!7.43e-13!10;UBERON:0005177!2.43e-12!85;UBERON:0002100!5.77e-10!98;UBERON:0003064!7.57e-09!14;UBERON:0005256!4.21e-08!47;UBERON:0005911!9.03e-08!69;UBERON:0005172!1.21e-07!49;UBERON:0005173!1.21e-07!49;UBERON:0002417!1.21e-07!49;UBERON:0000916!1.21e-07!49;UBERON:0000466!3.10e-07!79;UBERON:0003104!8.55e-07!131;UBERON:0009142!8.55e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.91e-38,7;UBERON:0006858,5.91e-38,7;UBERON:0003064,6.05e-19,14;UBERON:0009569,3.89e-15,66;UBERON:0005256,1.31e-12,45;UBERON:0005177,1.72e-12,79;UBERON:0005172,1.62e-11,49;UBERON:0005173,1.62e-11,49;UBERON:0002417,1.62e-11,49;UBERON:0000916,1.62e-11,49;UBERON:0002100,7.64e-11,90;UBERON:0002368,2.93e-09,60;UBERON:0003104,4.29e-09,61;UBERON:0009142,4.29e-09,61;UBERON:0002530,1.75e-08,65;UBERON:0000949,1.42e-07,72|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,1.94932925234301,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.867426633830679,1.82679286987285,1.84492397804847,1.95939432718409,2.23418543557839,1.0053327306374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0.538192240565737,0.482443521363367,1.10851914099963,0,0,0,0,0.167506257441816,1.19021820443007,0.390267295715598,0.472905432318573,0.221464689648775,0.956728611944923,0.491589944147214,0.690739927463582,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:80016202..80016213,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3116 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:80016202..80016213,+ | |||
|id=chr17:80016202..80016213,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.29e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.14e-24!27;UBERON:0002369!7.22e-19!7;UBERON:0006858!7.22e-19!7;UBERON:0009569!1.63e-17!66;UBERON:0002048!3.68e-16!14;UBERON:0000117!3.68e-16!14;UBERON:0000171!3.68e-16!14;UBERON:0000170!3.68e-16!14;UBERON:0005597!3.68e-16!14;UBERON:0000118!3.68e-16!14;UBERON:0005153!5.92e-13!17;UBERON:0005178!5.92e-13!17;UBERON:0005181!5.92e-13!17;UBERON:0002224!5.92e-13!17;UBERON:0000915!5.92e-13!17;UBERON:0008947!5.92e-13!17;UBERON:0003258!5.92e-13!17;UBERON:0002342!7.43e-13!10;UBERON:0005062!7.43e-13!10;UBERON:0005177!2.43e-12!85;UBERON:0002100!5.77e-10!98;UBERON:0003064!7.57e-09!14;UBERON:0005256!4.21e-08!47;UBERON:0005911!9.03e-08!69;UBERON:0005172!1.21e-07!49;UBERON:0005173!1.21e-07!49;UBERON:0002417!1.21e-07!49;UBERON:0000916!1.21e-07!49;UBERON:0000466!3.10e-07!79;UBERON:0003104!8.55e-07!131;UBERON:0009142!8.55e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.91e-38,7;UBERON:0006858,5.91e-38,7;UBERON:0003064,6.05e-19,14;UBERON:0009569,3.89e-15,66;UBERON:0005256,1.31e-12,45;UBERON:0005177,1.72e-12,79;UBERON:0005172,1.62e-11,49;UBERON:0005173,1.62e-11,49;UBERON:0002417,1.62e-11,49;UBERON:0000916,1.62e-11,49;UBERON:0002100,7.64e-11,90;UBERON:0002368,2.93e-09,60;UBERON:0003104,4.29e-09,61;UBERON:0009142,4.29e-09,61;UBERON:0002530,1.75e-08,65;UBERON:0000949,1.42e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,1.94932925234301,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.867426633830679,1.82679286987285,1.84492397804847,1.95939432718409,2.23418543557839,1.0053327306374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0.538192240565737,0.482443521363367,1.10851914099963,0,0,0,0,0.167506257441816,1.19021820443007,0.390267295715598,0.472905432318573,0.221464689648775,0.956728611944923,0.491589944147214,0.690739927463582,1.01254341007058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:80016202..80016213,+ | |||
}} |
Revision as of 15:22, 13 September 2013
Short description: | p@chr17:80016202..80016213, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:80016202..80016213, + |
Coexpression cluster: | MCL_coexpression_mm9:3116 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.29e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 5.91e-38 | 7 |
adrenal/interrenal gland | 5.91e-38 | 7 |
intermediate mesoderm | 6.05e-19 | 14 |
subdivision of trunk | 3.89e-15 | 66 |
trunk mesenchyme | 1.31e-12 | 45 |
trunk region element | 1.72e-12 | 79 |
abdomen element | 1.62e-11 | 49 |
abdominal segment element | 1.62e-11 | 49 |
abdominal segment of trunk | 1.62e-11 | 49 |
abdomen | 1.62e-11 | 49 |
trunk | 7.64e-11 | 90 |
endocrine gland | 2.93e-09 | 60 |
mesenchyme | 4.29e-09 | 61 |
entire embryonic mesenchyme | 4.29e-09 | 61 |
gland | 1.75e-08 | 65 |
endocrine system | 1.42e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.