FFCP PHASE1:Mm9::chr18:35886629..35886648,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73449|HGNC=|MCL_coexpression_id=219|UniProt=Q3TS39|association_with_transcript=0bp_to_ENSMUST00000097617,NM_001033168,uc008ems.1_5end|description=CAGE_peak_1_at_1700066B19Rik_5end|id=chr18:35886629..35886648,+|ontology_enrichment_celltype=CL:0002563!7.12e-08!9;CL:0002251!7.12e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,6.49e-15,9;CL:0002251,6.49e-15,9;CL:0000066,8.35e-12,25;CL:0000682,9.06e-10,3;CL:0002250,5.69e-09,3;CL:0002076,1.61e-08,15;CL:0000239,4.53e-08,6;CL:0000677,4.53e-08,6;CL:0000584,4.53e-08,6;CL:0000223,8.33e-08,20;CL:0000075,6.59e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!5.72e-17!128;UBERON:0001555!5.72e-17!128;UBERON:0007026!5.72e-17!128;UBERON:0005409!1.50e-16!59;UBERON:0004119!2.17e-16!130;UBERON:0000925!2.17e-16!130;UBERON:0006595!2.17e-16!130;UBERON:0004921!1.98e-15!126;UBERON:0004185!1.98e-15!126;UBERON:0000344!6.62e-14!15;UBERON:0000160!1.30e-13!43;UBERON:0001242!9.25e-12!13;UBERON:0000060!9.25e-12!13;UBERON:0001262!9.25e-12!13;UBERON:0004786!9.25e-12!13;UBERON:0004923!1.01e-08!24;UBERON:0000072!5.53e-08!27;UBERON:0003350!7.12e-08!9;UBERON:0004808!7.12e-08!9;UBERON:0001277!7.12e-08!9;UBERON:0006562!2.89e-07!24;UBERON:0001557!2.89e-07!24;UBERON:0001042!2.89e-07!24;UBERON:0008814!2.89e-07!24;UBERON:0009145!2.89e-07!24;UBERON:0000063!7.62e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.58e-41,31;UBERON:0005409,3.78e-33,47;UBERON:0000344,1.08e-29,15;UBERON:0001242,2.07e-24,13;UBERON:0001262,2.07e-24,13;UBERON:0004786,2.07e-24,13;UBERON:0004923,1.84e-17,24;UBERON:0001007,3.13e-16,116;UBERON:0001555,3.13e-16,116;UBERON:0007026,3.13e-16,116;UBERON:0004119,7.51e-16,118;UBERON:0000925,7.51e-16,118;UBERON:0006595,7.51e-16,118;UBERON:0003350,6.49e-15,9;UBERON:0004808,6.49e-15,9;UBERON:0001277,6.49e-15,9;UBERON:0004921,9.02e-14,114;UBERON:0000485,5.23e-12,11;UBERON:0002108,1.49e-11,4;UBERON:0000331,2.53e-09,3;UBERON:0002116,2.53e-09,3;UBERON:0001204,2.53e-09,3;UBERON:0001168,2.53e-09,3;UBERON:0001962,6.30e-07,2;UBERON:0001961,6.30e-07,2;UBERON:0001744,6.30e-07,2|phase1_expression=0,9.42233600626275,15.4699741392442,0.30246421130683,0,9.06548068324205,15.4184342793047,0.387369970324729,0,0,0,0,0.342401459862411,0.437102012094987,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0,0,15.1992801653736,14.4527847072317,16.0784949952206,13.7843838770904,17.2376986148711,10.6413114895569,5.04060259519861,27.7163138319131,0,0,0,7.51014211353314,5.15327400611326,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,0,0.505524445014783,0.5709193985953,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,5.59175283654366,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0,0,0.128867461322093,1.61346819698674,0.444756087689741,1.90225626112559,0.474529061544512,2.47048432086016,1.00534083520108,2.98434708061726,2.72949721966768,0.898819408654221,4.10662294761919,5.57595565112228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,2.91480836629851,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.609958401380546,0.86404272657441,1.04544148007234,1.74690050996942,0.404593039154462,0.247960367176008,0.26175594198403,5.18459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,2.2596410576262,1.42912905275575,0.716106782669926,0.79472541912506,0.841368146639782,0.295379054349154,0.403865799792591,0.990688486514998,0.403304740547362,0.292373642219257,0.192423683280659,0.467507608726276,0.680191150845634,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0.25384382367503,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p1@1700066B19Rik}} | ||
|EntrezGene=73449 | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|UniProt=Q3TS39 | |||
|association_with_transcript=0bp_to_ENSMUST00000097617,NM_001033168,uc008ems.1_5end | |||
|description=CAGE_peak_1_at_1700066B19Rik_5end | |||
|id=chr18:35886629..35886648,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.12e-08!9;CL:0002251!7.12e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.49e-15,9;CL:0002251,6.49e-15,9;CL:0000066,8.35e-12,25;CL:0000682,9.06e-10,3;CL:0002250,5.69e-09,3;CL:0002076,1.61e-08,15;CL:0000239,4.53e-08,6;CL:0000677,4.53e-08,6;CL:0000584,4.53e-08,6;CL:0000223,8.33e-08,20;CL:0000075,6.59e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.72e-17!128;UBERON:0001555!5.72e-17!128;UBERON:0007026!5.72e-17!128;UBERON:0005409!1.50e-16!59;UBERON:0004119!2.17e-16!130;UBERON:0000925!2.17e-16!130;UBERON:0006595!2.17e-16!130;UBERON:0004921!1.98e-15!126;UBERON:0004185!1.98e-15!126;UBERON:0000344!6.62e-14!15;UBERON:0000160!1.30e-13!43;UBERON:0001242!9.25e-12!13;UBERON:0000060!9.25e-12!13;UBERON:0001262!9.25e-12!13;UBERON:0004786!9.25e-12!13;UBERON:0004923!1.01e-08!24;UBERON:0000072!5.53e-08!27;UBERON:0003350!7.12e-08!9;UBERON:0004808!7.12e-08!9;UBERON:0001277!7.12e-08!9;UBERON:0006562!2.89e-07!24;UBERON:0001557!2.89e-07!24;UBERON:0001042!2.89e-07!24;UBERON:0008814!2.89e-07!24;UBERON:0009145!2.89e-07!24;UBERON:0000063!7.62e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.58e-41,31;UBERON:0005409,3.78e-33,47;UBERON:0000344,1.08e-29,15;UBERON:0001242,2.07e-24,13;UBERON:0001262,2.07e-24,13;UBERON:0004786,2.07e-24,13;UBERON:0004923,1.84e-17,24;UBERON:0001007,3.13e-16,116;UBERON:0001555,3.13e-16,116;UBERON:0007026,3.13e-16,116;UBERON:0004119,7.51e-16,118;UBERON:0000925,7.51e-16,118;UBERON:0006595,7.51e-16,118;UBERON:0003350,6.49e-15,9;UBERON:0004808,6.49e-15,9;UBERON:0001277,6.49e-15,9;UBERON:0004921,9.02e-14,114;UBERON:0000485,5.23e-12,11;UBERON:0002108,1.49e-11,4;UBERON:0000331,2.53e-09,3;UBERON:0002116,2.53e-09,3;UBERON:0001204,2.53e-09,3;UBERON:0001168,2.53e-09,3;UBERON:0001962,6.30e-07,2;UBERON:0001961,6.30e-07,2;UBERON:0001744,6.30e-07,2 | |||
|phase1_expression=0,9.42233600626275,15.4699741392442,0.30246421130683,0,9.06548068324205,15.4184342793047,0.387369970324729,0,0,0,0,0.342401459862411,0.437102012094987,0.333109761815663,0,0,0.157731082679119,0,0,0.17008658030214,0,0,15.1992801653736,14.4527847072317,16.0784949952206,13.7843838770904,17.2376986148711,10.6413114895569,5.04060259519861,27.7163138319131,0,0,0,7.51014211353314,5.15327400611326,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,0,0.505524445014783,0.5709193985953,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,5.59175283654366,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0,0,0.128867461322093,1.61346819698674,0.444756087689741,1.90225626112559,0.474529061544512,2.47048432086016,1.00534083520108,2.98434708061726,2.72949721966768,0.898819408654221,4.10662294761919,5.57595565112228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,2.91480836629851,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.609958401380546,0.86404272657441,1.04544148007234,1.74690050996942,0.404593039154462,0.247960367176008,0.26175594198403,5.18459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,2.2596410576262,1.42912905275575,0.716106782669926,0.79472541912506,0.841368146639782,0.295379054349154,0.403865799792591,0.990688486514998,0.403304740547362,0.292373642219257,0.192423683280659,0.467507608726276,0.680191150845634,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0.25384382367503,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p1@1700066B19Rik | |||
}} |
Revision as of 16:01, 13 September 2013
Short description: | p1@1700066B19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1700066B19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | 0bp_to_ENSMUST00000097617, NM_001033168, uc008ems.1_5end |
EntrezGene: | 1700066B19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.49e-15 | 9 |
epithelial cell of alimentary canal | 6.49e-15 | 9 |
epithelial cell | 8.35e-12 | 25 |
M cell of gut | 9.06e-10 | 3 |
intestinal crypt stem cell | 5.69e-09 | 3 |
endo-epithelial cell | 1.61e-08 | 15 |
brush border epithelial cell | 4.53e-08 | 6 |
gut absorptive cell | 4.53e-08 | 6 |
enterocyte | 4.53e-08 | 6 |
endodermal cell | 8.33e-08 | 20 |
columnar/cuboidal epithelial cell | 6.59e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.58e-41 | 31 |
gastrointestinal system | 3.78e-33 | 47 |
mucosa | 1.08e-29 | 15 |
intestinal mucosa | 2.07e-24 | 13 |
wall of intestine | 2.07e-24 | 13 |
gastrointestinal system mucosa | 2.07e-24 | 13 |
organ component layer | 1.84e-17 | 24 |
digestive system | 3.13e-16 | 116 |
digestive tract | 3.13e-16 | 116 |
primitive gut | 3.13e-16 | 116 |
endoderm-derived structure | 7.51e-16 | 118 |
endoderm | 7.51e-16 | 118 |
presumptive endoderm | 7.51e-16 | 118 |
epithelium of mucosa | 6.49e-15 | 9 |
gastrointestinal system epithelium | 6.49e-15 | 9 |
intestinal epithelium | 6.49e-15 | 9 |
subdivision of digestive tract | 9.02e-14 | 114 |
simple columnar epithelium | 5.23e-12 | 11 |
small intestine | 1.49e-11 | 4 |
ileal mucosa | 2.53e-09 | 3 |
ileum | 2.53e-09 | 3 |
mucosa of small intestine | 2.53e-09 | 3 |
wall of small intestine | 2.53e-09 | 3 |
gut-associated lymphoid tissue | 6.30e-07 | 2 |
mucosa-associated lymphoid tissue | 6.30e-07 | 2 |
lymphoid tissue | 6.30e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.