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FFCP PHASE1:Mm9::chr19:38199291..38199306,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19662|HGNC=|MCL_coexpression_id=8|UniProt=Q00724|association_with_transcript=0bp_to_ENSMUST00000112335,NM_011255,uc008hjd.2_5end|description=CAGE_peak_1_at_Rbp4_5end|id=chr19:38199291..38199306,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.48e-15!22;UBERON:0007499!7.48e-15!22;UBERON:0006925!7.48e-15!22;UBERON:0009497!7.48e-15!22;UBERON:0000015!7.48e-15!22;UBERON:0002423!7.48e-15!22;UBERON:0006235!7.48e-15!22;UBERON:0008835!7.48e-15!22;UBERON:0003894!7.48e-15!22;UBERON:0004161!7.48e-15!22;UBERON:0008836!7.48e-15!22;UBERON:0002365!2.87e-14!25;UBERON:0002330!2.87e-14!25;UBERON:0009854!2.96e-14!23;UBERON:0009856!2.96e-14!23;UBERON:0005177!1.03e-10!85;UBERON:0005172!2.58e-10!49;UBERON:0005173!2.58e-10!49;UBERON:0002417!2.58e-10!49;UBERON:0000916!2.58e-10!49;UBERON:0000468!2.43e-09!333;UBERON:0009569!1.64e-08!66;UBERON:0000466!2.88e-08!79;UBERON:0005256!6.93e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.93e-15,22;UBERON:0007499,4.93e-15,22;UBERON:0006925,4.93e-15,22;UBERON:0009497,4.93e-15,22;UBERON:0000015,4.93e-15,22;UBERON:0002423,4.93e-15,22;UBERON:0006235,4.93e-15,22;UBERON:0008835,4.93e-15,22;UBERON:0003894,4.93e-15,22;UBERON:0004161,4.93e-15,22;UBERON:0008836,4.93e-15,22;UBERON:0002365,1.93e-14,25;UBERON:0002330,1.93e-14,25;UBERON:0009854,1.98e-14,23;UBERON:0009856,1.98e-14,23;UBERON:0005177,2.67e-11,79;UBERON:0005172,2.17e-10,49;UBERON:0005173,2.17e-10,49;UBERON:0002417,2.17e-10,49;UBERON:0000916,2.17e-10,49;UBERON:0009569,1.64e-08,66;UBERON:0005256,5.85e-08,45;UBERON:0002100,4.28e-07,90|phase1_expression=1.12104192973356,0,0.454999239389536,0.30246421130683,0.500895729946347,15.9485308316295,12.1478573109673,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,19.3898701544439,0,0,7.83962871687693,7.57050627521661,0.57423196411502,3.01533397311352,1.939241094173,3.23039813075836,3.52842181663903,0.665191531965914,0,0,0,0,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,6.25913075478431,0.65407546914134,0.439372365468944,0.58328969722285,1.25987779462826,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,1.01158230429799,1.05798195854407,2.53532561402472,6.43804610931351,3.55717918444456,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0,0.622137673850866,0.810035629990144,0,7.14127461009509,7.50953039235486,0.122490799214954,0.191690942036473,0.919218786610021,6.60695285996332,5.10749352340751,1.53606533256243,1.58263545276233,2.10421580285542,2.6045668527838,8.09630697104005,20.2594539611405,15.4326230254578,8.83885756421003,3.27454865837937,4.47358669980721,1.21161909333094,0.755715601067855,30.7256358023778,9547.26333898546,9819.46603007363,9403.24870790569,11547.1767144625,10947.5369862234,1866.78723239125,0,0,0,0.704217098883403,0,0,0,1.5154372870785,0.506719730950197,1.01104889002957,4016.76052075709,1.55362730188303,42.3060096334751,83.4464421745113,115.392416280302,166.273773521618,101.888505013573,123.232965078219,72.2582900145634,2823.70811642975,69.4076913215576,7.96149496754887,11.8089800461609,4.63767188766826,11.6370060752453,5.59175283654366,5.27005434620785,9.21565509979202,4.08731288333746,0,0,0.127070227073065,4.79330046095433,12.3525162761029,0.251308704225729,19.1206752211504,16.1100738118108,4.57133698031032,6.00292673350703,15.2759045775474,20.6515571212754,3.53811861807145,0.841767423545896,1.17108398666433,1.37941262660084,3.60124259610698,55.4593729635431,2.38127747029647,1.0249097622788,0.749613796477831,1.55222022443409,0.862271971731369,9.07709184805532,2.46331573829528,5.47989331068937,4.44875598760957,9.4028084960985,11.9353639116607,2.18937693500343,0,0.257347907114715,0.284163499395593,14.0845525324141,30.2538617375614,0.180062061461015,0.473489471170421,2.55793501271625,1.69693824176116,2.09280550275367,0.804820204198858,0.467061369468678,5.10135534731789,2.46251196118643,2.10778904819225,1.90059983652932,11.4166059951346,7.51555945058082,4.6263788684108,0.514523061896422,12.8863325363681,3.96675849995316,34.9792730877784,72.6900782923173,28.0931065682163,11.0925938542838,8.67274370994994,31.5774539346848,5.69434873853414,12.1877226495768,42.2243150784453,21.4872989804443,11.8928093142663,2.69645822596266,8.64552199498777,10.3553462092271,6.82804443431094,27.3053945137252,7.88954149711563,5.7022371796688,4.84881217919064,11.8529535614638,4.36332106157375,4.42830443938806,4.86696056308262,6.78684401569903,9329.06772180549,653.031743772792,881.173975092489,984.671190133275,1353.48272990409,1778.44037601432,2674.08069540847,2874.6598054085,5140.4973649025,6579.58970563919,3423.12099741631,5979.56074713751,6891.03997306196,8204.77227123398,5673.08440780343,10096.0955715712,18.4753190166605,21.0335467065238,8.96307370431142,5.09235257325564,5.16318546234705,5.02518772325447,34.754371569358,13.2690880543303,3.94087860265477,2.21464689648775,6.537645514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|EntrezGene=19662
|HGNC=
|MCL_coexpression_id=8
|UniProt=Q00724
|association_with_transcript=0bp_to_ENSMUST00000112335,NM_011255,uc008hjd.2_5end
|description=CAGE_peak_1_at_Rbp4_5end
|id=chr19:38199291..38199306,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.48e-15!22;UBERON:0007499!7.48e-15!22;UBERON:0006925!7.48e-15!22;UBERON:0009497!7.48e-15!22;UBERON:0000015!7.48e-15!22;UBERON:0002423!7.48e-15!22;UBERON:0006235!7.48e-15!22;UBERON:0008835!7.48e-15!22;UBERON:0003894!7.48e-15!22;UBERON:0004161!7.48e-15!22;UBERON:0008836!7.48e-15!22;UBERON:0002365!2.87e-14!25;UBERON:0002330!2.87e-14!25;UBERON:0009854!2.96e-14!23;UBERON:0009856!2.96e-14!23;UBERON:0005177!1.03e-10!85;UBERON:0005172!2.58e-10!49;UBERON:0005173!2.58e-10!49;UBERON:0002417!2.58e-10!49;UBERON:0000916!2.58e-10!49;UBERON:0000468!2.43e-09!333;UBERON:0009569!1.64e-08!66;UBERON:0000466!2.88e-08!79;UBERON:0005256!6.93e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.93e-15,22;UBERON:0007499,4.93e-15,22;UBERON:0006925,4.93e-15,22;UBERON:0009497,4.93e-15,22;UBERON:0000015,4.93e-15,22;UBERON:0002423,4.93e-15,22;UBERON:0006235,4.93e-15,22;UBERON:0008835,4.93e-15,22;UBERON:0003894,4.93e-15,22;UBERON:0004161,4.93e-15,22;UBERON:0008836,4.93e-15,22;UBERON:0002365,1.93e-14,25;UBERON:0002330,1.93e-14,25;UBERON:0009854,1.98e-14,23;UBERON:0009856,1.98e-14,23;UBERON:0005177,2.67e-11,79;UBERON:0005172,2.17e-10,49;UBERON:0005173,2.17e-10,49;UBERON:0002417,2.17e-10,49;UBERON:0000916,2.17e-10,49;UBERON:0009569,1.64e-08,66;UBERON:0005256,5.85e-08,45;UBERON:0002100,4.28e-07,90
|phase1_expression=1.12104192973356,0,0.454999239389536,0.30246421130683,0.500895729946347,15.9485308316295,12.1478573109673,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,19.3898701544439,0,0,7.83962871687693,7.57050627521661,0.57423196411502,3.01533397311352,1.939241094173,3.23039813075836,3.52842181663903,0.665191531965914,0,0,0,0,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,6.25913075478431,0.65407546914134,0.439372365468944,0.58328969722285,1.25987779462826,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,1.01158230429799,1.05798195854407,2.53532561402472,6.43804610931351,3.55717918444456,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0,0.622137673850866,0.810035629990144,0,7.14127461009509,7.50953039235486,0.122490799214954,0.191690942036473,0.919218786610021,6.60695285996332,5.10749352340751,1.53606533256243,1.58263545276233,2.10421580285542,2.6045668527838,8.09630697104005,20.2594539611405,15.4326230254578,8.83885756421003,3.27454865837937,4.47358669980721,1.21161909333094,0.755715601067855,30.7256358023778,9547.26333898546,9819.46603007363,9403.24870790569,11547.1767144625,10947.5369862234,1866.78723239125,0,0,0,0.704217098883403,0,0,0,1.5154372870785,0.506719730950197,1.01104889002957,4016.76052075709,1.55362730188303,42.3060096334751,83.4464421745113,115.392416280302,166.273773521618,101.888505013573,123.232965078219,72.2582900145634,2823.70811642975,69.4076913215576,7.96149496754887,11.8089800461609,4.63767188766826,11.6370060752453,5.59175283654366,5.27005434620785,9.21565509979202,4.08731288333746,0,0,0.127070227073065,4.79330046095433,12.3525162761029,0.251308704225729,19.1206752211504,16.1100738118108,4.57133698031032,6.00292673350703,15.2759045775474,20.6515571212754,3.53811861807145,0.841767423545896,1.17108398666433,1.37941262660084,3.60124259610698,55.4593729635431,2.38127747029647,1.0249097622788,0.749613796477831,1.55222022443409,0.862271971731369,9.07709184805532,2.46331573829528,5.47989331068937,4.44875598760957,9.4028084960985,11.9353639116607,2.18937693500343,0,0.257347907114715,0.284163499395593,14.0845525324141,30.2538617375614,0.180062061461015,0.473489471170421,2.55793501271625,1.69693824176116,2.09280550275367,0.804820204198858,0.467061369468678,5.10135534731789,2.46251196118643,2.10778904819225,1.90059983652932,11.4166059951346,7.51555945058082,4.6263788684108,0.514523061896422,12.8863325363681,3.96675849995316,34.9792730877784,72.6900782923173,28.0931065682163,11.0925938542838,8.67274370994994,31.5774539346848,5.69434873853414,12.1877226495768,42.2243150784453,21.4872989804443,11.8928093142663,2.69645822596266,8.64552199498777,10.3553462092271,6.82804443431094,27.3053945137252,7.88954149711563,5.7022371796688,4.84881217919064,11.8529535614638,4.36332106157375,4.42830443938806,4.86696056308262,6.78684401569903,9329.06772180549,653.031743772792,881.173975092489,984.671190133275,1353.48272990409,1778.44037601432,2674.08069540847,2874.6598054085,5140.4973649025,6579.58970563919,3423.12099741631,5979.56074713751,6891.03997306196,8204.77227123398,5673.08440780343,10096.0955715712,18.4753190166605,21.0335467065238,8.96307370431142,5.09235257325564,5.16318546234705,5.02518772325447,34.754371569358,13.2690880543303,3.94087860265477,2.21464689648775,6.53764551495697,11.4704320301017,16.0597033135283,16.3453436197108,1.50791283939272,0,58.5199484892653,34.7680300343963,13.0045977890111,7.501547941901,0,27.2668601380723,12.9358369960665,1.17131623288992,0.861693590931196,0.716906393857656,4.67877215573028,16.9845918473299,11.7395103485719,7.01414058987149,1.18586333383957,0.642642632843614,45.1369470962294,121.796872908403,10.750539317336,8.24850614862677,10.619611067197,117.991389171321,119.417805001077,109.579551338177,136.724776403798,106.987431484487,89.6746177293727,85.0668926977363,92.3328210016428,12.9575070753685,11.5960469432499,15.470331487228,24.8520912200265,1.44048875225048,3.75140182969988,7.71613326113732,54.7981321954625,65.9964625127661,65.8196082408484,105.953802291881,283.718095049026,328.127877768057,1.98475558249466,36.6047481530086,7.42736362801165,19.9032652262914,16.592755816436,9.19189038572343,4.95517422270746,7.97328798645192,0.341741761595705,10.3193433981611,6.48180845793991,1.50694765603753,1.0935538217682,2.51655990527175,0.169978429993855,0.139951452323658,0,38.1868247206045,21.8271835570983,43.1037270308919,26.2452978196977,12.7543860568826,50.0050270978747,200.813011766998,570.556804871994,23.2962788365786,11.9245775428449,2.4853572523477,4.50954350947352,0.448549638131936,1.82004339502807,1.55560950675238,4.64975364519832,2.53434188236167,1.87771581833206,129.423158534886,10.3810750981454,6.76435538312817,5.47257011889944,3.16011120628178,2.8381530140623,1.95150818613172,0.25984164595559,0.716106782669926,1.19208812868759,0.360586348559907,0.443068581523732,1.11063094942962,0.685861259894999,0.201652370273681,0.292373642219257,1.53938946624527,1.40252282617883,3.40095575422817,0.665957860122194,0.62799699626633,1.51096154727671,36.3196436780518,212.268879735287,7.14291334642334,29.154099554753,7.52358156053045,20.3310663342144,16.5717085142584,12.6037012956667,20.2786755165551,23.9778881919725,24.9279986138601,24.300810008345,13.9599572999508,18.5788387683524,15.0150490408028,7.68026372122907,75.4157010727949,157.587118111066,200.319934864274,185.92687525102,215.096904886517,191.354432637191,188.11000725911,202.820940462027,183.710872952281,174.393758324485,174.856618464893,156.194034459764,163.904390156465,155.822427276579,177.181253157303,164.903395819529,158.185560780238,168.543133428552,186.501031810281,180.692096007114,188.301830335057,160.705992024494,176.01451054175,179.748916593281,187.421356480063,194.086579218012,206.772793190144,163.915565411955,261.492298592506,184.002913110594,168.442664862214,205.433983671184,170.585462145749,223.964575349105,6.99469618226249,362.593993090383,413.197036934878,17.2159498861959,67.9421570888108,38.7219285486104
|short_description=p1@Rbp4
}}

Revision as of 17:30, 13 September 2013

Short description:p1@Rbp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbp4_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000112335, NM_011255, uc008hjd.2_5end
EntrezGene:Rbp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.15
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G330.73
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79547.26
Mouse hepatocyte, donor1.CNhs13078.11714-123C49819.47
Mouse hepatocyte, donor3.CNhs12615.11637-122C89403.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F411547.18
Mouse hepatocyte, donor8.CNhs13091.11824-124F610947.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71866.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64016.76
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D742.31
adrenal gland, embryo E14.CNhs11038.406-44C583.45
adrenal gland, embryo E16.CNhs11004.1254-43D6115.39
adrenal gland, embryo E17.CNhs11043.1263-45I1166.27
adrenal gland, embryo E18.CNhs11026.1262-18F5101.89
adrenal gland, neonate N00.CNhs11191.1311-23C1123.23
adrenal gland, neonate N25.CNhs11223.1377-27I372.26
amnion, adult pregnant day17.5.CNhs10488.583-22A82823.71
aorta, adult.CNhs10498.46-23H169.41
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.65
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D455.46
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E914.08
heart, embryo E12.CNhs11015.353-12F530.25
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D311.42
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I534.98
intestine, embryo E13.CNhs11010.381-16D572.69
intestine, embryo E15.CNhs10602.976-16D828.09
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F731.58
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E912.19
intestine, neonate N06.CNhs11102.688-20B842.22
intestine, neonate N07.CNhs11095.720-20F221.49
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F827.31
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G711.85
kidney, neonate N10.CNhs11206.758-6D54.36
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B29329.07
liver, embryo E12.CNhs10601.355-15F8653.03
liver, embryo E13.CNhs10524.378-3H6881.17
liver, embryo E14.CNhs10594.409-16E1984.67
liver, embryo E15.CNhs10520.433-16D71353.48
liver, embryo E16.CNhs10523.462-17F51778.44
liver, embryo E17.CNhs10510.481-18A32674.08
liver, embryo E18.CNhs10579.499-43G42874.66
liver, neonate N00.CNhs11117.641-24F45140.50
liver, neonate N03.CNhs11123.1345-25G26579.59
liver, neonate N06.CNhs11101.684-20A83423.12
liver, neonate N07.CNhs11103.716-20H25979.56
liver, neonate N10.CNhs11115.751-24B96891.04
liver, neonate N20.CNhs11220.823-25A38204.77
liver, neonate N25.CNhs11198.1368-26H15673.08
liver, neonate N30.CNhs11106.1382-42D110096.10
lung, adult.CNhs10474.28-22B118.48
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F88.96
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I634.75
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A411.47
lung, neonate N25.CNhs11119.1359-25C716.06
lung, neonate N30.CNhs11133.1394-42H216.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B658.52
mammary gland, adult pregnant day19.CNhs10476.588-5H234.77
medulla oblongata, adult.CNhs10477.17-12C213.00
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I745.14
ovary, embryo E18.CNhs11040.505-44H7121.80
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F4117.99
pancreas, embryo E15.CNhs11042.1556-45F2119.42
pancreas, embryo E16.CNhs11003.460-26E5109.58
pancreas, embryo E17.CNhs10599.1558-45G3136.72
pancreas, embryo E18.CNhs10580.1535-43I7106.99
pancreas, neonate N00.CNhs11105.645-26G989.67
pancreas, neonate N01.CNhs11138.1531-43D785.07
pancreas, neonate N02.CNhs11139.1539-43D892.33
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B954.80
pituitary gland, embryo E16.CNhs11036.449-43F666.00
pituitary gland, embryo E17.CNhs11039.1265-44F565.82
pituitary gland, neonate N00.CNhs11190.1308-22E9105.95
placenta, adult pregnant day10.CNhs10472.539-13I7283.72
placenta, adult pregnant day17.CNhs10464.577-18G3328.13
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C336.60
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H319.90
skin, neonate N06.CNhs11097.693-20I516.59
skin, neonate N10.CNhs11108.762-6C49.19
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C110.32
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E321.83
stomach, embryo E15.CNhs10603.1252-16G843.10
stomach, embryo E16.CNhs11022.459-17D426.25
stomach, embryo E17.CNhs11006.1035-18D512.75
stomach, embryo E18.CNhs10999.1286-20C650.01
stomach, neonate N03.CNhs11193.1340-24B8200.81
stomach, neonate N07.CNhs11210.718-18A9570.56
stomach, neonate N25.CNhs11104.1355-25E423.30
stomach, neonate N30.CNhs11134.1386-42I111.92
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I4129.42
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H36.76
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E436.32
uterus, adult pregnant day19.CNhs10497.590-15F5212.27
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D529.15
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I87.68
whole body, embryo E12.CNhs10587.857-27C975.42
whole body, embryo E13.CNhs10512.372-23H2157.59
whole body, embryo E14.5.CNhs10578.420-27D2200.32
whole body, embryo E14.CNhs10519.395-14B1185.93
whole body, embryo E16.CNhs10514.453-14F2215.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5191.35
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5188.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5202.82
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5183.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5174.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5174.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5156.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5163.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5155.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5177.18
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5164.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5158.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5168.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5186.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5180.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5188.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5160.71
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5176.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5179.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5187.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5194.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5206.77
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5163.92
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5261.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5184.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5168.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5205.43
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5170.59
whole body, embryo E17.5.CNhs10513.490-9F9223.96
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B3362.59
whole body, neonate N00.CNhs10525.657-19C2413.20
whole body, neonate N01.CNhs10576.659-23C617.22
whole body, neonate N06.CNhs10515.692-21D167.94
whole body, neonate N10.CNhs10518.761-6B438.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver4.93e-1522
epithelial sac4.93e-1522
digestive gland4.93e-1522
epithelium of foregut-midgut junction4.93e-1522
anatomical boundary4.93e-1522
hepatobiliary system4.93e-1522
foregut-midgut junction4.93e-1522
hepatic diverticulum4.93e-1522
liver primordium4.93e-1522
septum transversum4.93e-1522
liver bud4.93e-1522
exocrine gland1.93e-1425
exocrine system1.93e-1425
digestive tract diverticulum1.98e-1423
sac1.98e-1423
trunk region element2.67e-1179
abdomen element2.17e-1049
abdominal segment element2.17e-1049
abdominal segment of trunk2.17e-1049
abdomen2.17e-1049
subdivision of trunk1.64e-0866
trunk mesenchyme5.85e-0845
trunk4.28e-0790







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