FFCP PHASE1:Hg19::chr6:139695775..139695795,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10370|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1987|TSSclassifier=S|UniProt=D9ZGF1,Q99967|association_with_transcript=0bp_to_NM_006079,uc003qip.1_5end|coexpression_cluster_id=C715|description=CAGE_peak_1_at_CITED2_5end|id=chr6:139695775..139695795,-|ontology_enrichment_celltype=CL:0002320!9.61e-14!365;CL:0000048!5.27e-13!430;CL:0000057!1.50e-12!75;CL:0000134!1.02e-11!358;CL:0000723!1.39e-11!436;CL:0000034!4.01e-11!444;CL:0002620!1.07e-10!23;CL:0000219!7.51e-09!390;CL:0002371!4.11e-07!591|ontology_enrichment_celltype_v019=CL:0002620;1.04e-10;23!CL:0000349;3.56e-07;19|ontology_enrichment_celltype_v019_2=CL:0002320,1.31e-14,361;CL:0000048,4.91e-14,427;CL:0000057,1.13e-12,76;CL:0000723,1.51e-12,433;CL:0000134,1.63e-12,354;CL:0000034,4.60e-12,441;CL:0002620,1.07e-10,23;CL:0000219,1.67e-09,386;CL:0000349,3.53e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.02e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.32e-15,371;UBERON:0000926,1.61e-07,315;UBERON:0004120,1.61e-07,315;UBERON:0006603,1.61e-07,315|phase1_expression=524.687159333368,409.574302203451,470.22389206416,559.409737793999,286.949022622319,457.105386628593,250.766879386627,319.650255953976,261.446813828038,186.020589931642,374.719227201194,241.37771620384,298.056685398153,866.735769779207,871.243700788691,102.19342226067,122.949683716891,139.489227263988,105.39348453875,263.72530640048,462.061565668233,219.418305034661,39.7868022112169,64.1941053591827,74.6978705589077,42.7150938131048,43.4312118190213,41.5592925336226,426.406876104212,264.842284687077,183.921554499498,11.9524759182261,21.3856202332558,18.1179464981726,48.2620659615279,42.0820928162768,110.980966068572,164.536636333968,345.337538543584,276.905871033427,124.944834625878,112.067208442567,150.424131498365,90.2923062821097,61.5937788212759,99.4594650870046,198.72682655436,196.949418362455,300.105473397355,388.384729634903,178.287851744254,328.946781775022,1397.25424402551,609.983025986716,713.697584352181,118.027946893213,79.1427835167753,128.317109618143,1043.74607298478,722.411239948287,1209.62584201179,104.562862159189,67.0197889608683,97.605467871987,408.904817227675,349.509298409742,477.704664979606,227.631290722609,176.782709344448,217.406033549822,459.498222498727,584.456608312265,578.493244241937,116.612918044192,146.909571275845,112.377033992489,119.068349015285,217.005610155977,260.696901622664,165.592404113665,216.023511438212,144.487345627825,63.3586480060762,49.1524750135918,40.02791642386,59.3155009367445,43.2427665998893,55.7509866755849,60.8161282962073,61.0594402902633,68.8747692622433,82.8004437013024,78.7482849937971,43.6165384310785,116.585781100159,218.345406278539,373.945272986397,448.425280296797,519.966190969759,45.9762862324365,168.8277341162,144.875028554828,179.240590135278,85.4518204309281,186.190933524097,188.082276501494,203.915309415057,98.3741335493185,74.3939468042503,34.6963978713757,39.5180525433763,70.1323467478827,270.919550897084,205.4713559729,219.524599990451,79.5431585736915,287.032149707839,236.759309937532,346.383958374699,100.666670926415,75.5256806473445,93.1443003559407,139.432560266018,118.259628706683,144.919642800721,99.9200003625751,110.03115158742,314.909732917032,419.078786792756,344.682081241062,124.34150182012,128.774565063098,244.984668492204,577.941204662921,831.719593744941,1221.78038743455,77.1427368639566,193.194043510146,295.232234003384,269.622947314478,257.970765580711,206.1610648334,116.210196965321,90.8421884821852,179.799256084695,200.075068156858,261.794224261645,50.3215217284272,39.4676488438288,40.117410143593,120.450018864223,198.714191469515,180.860201337557,287.176434497397,180.804257006469,111.147688943787,157.582204768755,216.294827424728,232.671135797108,203.51013256092,163.548702746314,209.835101178309,105.190746803261,215.450565082679,136.913989192017,131.359900305881,104.406158271169,121.169953000055,105.788479851459,153.781036850037,80.6087673293792,100.153117251408,93.0672633955981,92.0158450020747,539.214567589421,206.027842478271,466.87477154741,314.946609582197,197.550288884485,397.520418500896,83.2642166691699,203.994062540991,253.32578281541,124.472660992392,71.1059278543545,596.196907493385,404.475498984959,1326.49362561112,486.345399701639,508.290392996104,485.259865751698,263.640449455252,144.390666376373,144.242978483209,284.182606386811,213.854546439788,400.284076274915,172.260414305898,209.929622957495,3486.82817758458,1236.02320392393,163.95937499126,244.106232270202,449.397995315345,440.733531364361,369.317793937819,300.025403636474,153.700608181828,2266.40865729308,1062.23445198355,1804.38820647251,1506.15721124762,1606.38282576879,2821.67919457973,1718.97528507856,696.877475824188,1291.52750341169,2653.33140107989,1667.02366441204,756.1802537984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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10370 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1987 | |||
|TSSclassifier=S | |||
|UniProt=D9ZGF1,Q99967 | |||
|association_with_transcript=0bp_to_NM_006079,uc003qip.1_5end | |||
|coexpression_cluster_id=C715 | |||
|description=CAGE_peak_1_at_CITED2_5end | |||
|id=chr6:139695775..139695795,- | |||
|ontology_enrichment_celltype=CL:0002320!9.61e-14!365;CL:0000048!5.27e-13!430;CL:0000057!1.50e-12!75;CL:0000134!1.02e-11!358;CL:0000723!1.39e-11!436;CL:0000034!4.01e-11!444;CL:0002620!1.07e-10!23;CL:0000219!7.51e-09!390;CL:0002371!4.11e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.04e-10;23!CL:0000349;3.56e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.31e-14,361;CL:0000048,4.91e-14,427;CL:0000057,1.13e-12,76;CL:0000723,1.51e-12,433;CL:0000134,1.63e-12,354;CL:0000034,4.60e-12,441;CL:0002620,1.07e-10,23;CL:0000219,1.67e-09,386;CL:0000349,3.53e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.02e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.32e-15,371;UBERON:0000926,1.61e-07,315;UBERON:0004120,1.61e-07,315;UBERON:0006603,1.61e-07,315 | |||
|phase1_expression=524.687159333368,409.574302203451,470.22389206416,559.409737793999,286.949022622319,457.105386628593,250.766879386627,319.650255953976,261.446813828038,186.020589931642,374.719227201194,241.37771620384,298.056685398153,866.735769779207,871.243700788691,102.19342226067,122.949683716891,139.489227263988,105.39348453875,263.72530640048,462.061565668233,219.418305034661,39.7868022112169,64.1941053591827,74.6978705589077,42.7150938131048,43.4312118190213,41.5592925336226,426.406876104212,264.842284687077,183.921554499498,11.9524759182261,21.3856202332558,18.1179464981726,48.2620659615279,42.0820928162768,110.980966068572,164.536636333968,345.337538543584,276.905871033427,124.944834625878,112.067208442567,150.424131498365,90.2923062821097,61.5937788212759,99.4594650870046,198.72682655436,196.949418362455,300.105473397355,388.384729634903,178.287851744254,328.946781775022,1397.25424402551,609.983025986716,713.697584352181,118.027946893213,79.1427835167753,128.317109618143,1043.74607298478,722.411239948287,1209.62584201179,104.562862159189,67.0197889608683,97.605467871987,408.904817227675,349.509298409742,477.704664979606,227.631290722609,176.782709344448,217.406033549822,459.498222498727,584.456608312265,578.493244241937,116.612918044192,146.909571275845,112.377033992489,119.068349015285,217.005610155977,260.696901622664,165.592404113665,216.023511438212,144.487345627825,63.3586480060762,49.1524750135918,40.02791642386,59.3155009367445,43.2427665998893,55.7509866755849,60.8161282962073,61.0594402902633,68.8747692622433,82.8004437013024,78.7482849937971,43.6165384310785,116.585781100159,218.345406278539,373.945272986397,448.425280296797,519.966190969759,45.9762862324365,168.8277341162,144.875028554828,179.240590135278,85.4518204309281,186.190933524097,188.082276501494,203.915309415057,98.3741335493185,74.3939468042503,34.6963978713757,39.5180525433763,70.1323467478827,270.919550897084,205.4713559729,219.524599990451,79.5431585736915,287.032149707839,236.759309937532,346.383958374699,100.666670926415,75.5256806473445,93.1443003559407,139.432560266018,118.259628706683,144.919642800721,99.9200003625751,110.03115158742,314.909732917032,419.078786792756,344.682081241062,124.34150182012,128.774565063098,244.984668492204,577.941204662921,831.719593744941,1221.78038743455,77.1427368639566,193.194043510146,295.232234003384,269.622947314478,257.970765580711,206.1610648334,116.210196965321,90.8421884821852,179.799256084695,200.075068156858,261.794224261645,50.3215217284272,39.4676488438288,40.117410143593,120.450018864223,198.714191469515,180.860201337557,287.176434497397,180.804257006469,111.147688943787,157.582204768755,216.294827424728,232.671135797108,203.51013256092,163.548702746314,209.835101178309,105.190746803261,215.450565082679,136.913989192017,131.359900305881,104.406158271169,121.169953000055,105.788479851459,153.781036850037,80.6087673293792,100.153117251408,93.0672633955981,92.0158450020747,539.214567589421,206.027842478271,466.87477154741,314.946609582197,197.550288884485,397.520418500896,83.2642166691699,203.994062540991,253.32578281541,124.472660992392,71.1059278543545,596.196907493385,404.475498984959,1326.49362561112,486.345399701639,508.290392996104,485.259865751698,263.640449455252,144.390666376373,144.242978483209,284.182606386811,213.854546439788,400.284076274915,172.260414305898,209.929622957495,3486.82817758458,1236.02320392393,163.95937499126,244.106232270202,449.397995315345,440.733531364361,369.317793937819,300.025403636474,153.700608181828,2266.40865729308,1062.23445198355,1804.38820647251,1506.15721124762,1606.38282576879,2821.67919457973,1718.97528507856,696.877475824188,1291.52750341169,2653.33140107989,1667.02366441204,756.180253798402,2610.38553377467,1990.55920468349,1792.42502131416,34.5936927162301,24.0016586119934,36.9977928051815,120.388047949911,135.047833919593,162.090550302978,159.016058393578,166.531761577915,92.7042492052608,744.699773889924,1121.81219620839,600.88690788329,2073.40279866279,1746.22646615873,63.8856720215157,72.1542473534275,54.7095037835504,76.433723103549,83.8835859755764,61.2158197306629,58.6516190496715,55.3344531653476,58.0968206989049,125.48642728619,486.638955097957,257.645331093456,660.069114121083,173.654397705908,60.9352874340128,250.494920432915,71.5170221051734,113.641317213837,252.54781675943,60.0334061185182,52.8288240310812,17.7936281168587,30.2764215668392,1015.21867934697,508.528110001714,215.053699617657,111.640979990999,175.291180494082,167.609445850607,321.311945728168,141.92959756701,408.535673744945,389.752717591072,111.043869745416,161.930951476352,214.028873695769,39.3682102744463,46.1950852546864,20.557389100146,39.4057499892533,18.6005720648936,27.22017022073,2021.39726508706,45.6971372528643,614.520534462848,828.545612194111,468.106943145017,13.906038849985,34.7609467258033,15.2382681373061,124.882885596575,30.7454203182937,14.416466776508,30.0117754262107,716.6297600512,406.314784152617,362.80449995624,172.448468820876,1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99938136 | |||
|short_description=p1@CITED2 | |||
}} |
Revision as of 18:23, 13 September 2013
Short description: | p1@CITED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CITED2_5end |
Coexpression cluster: | C715_liposarcoma_Fibroblast_Mesenchymal_Olfactory_Hair_Mast_peripheral |
Association with transcript: | 0bp_to_NM_006079, uc003qip.1_5end |
EntrezGene: | CITED2 |
HGNC: | 1987 |
UniProt: | D9ZGF1Q99967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.31e-14 | 361 |
multi fate stem cell | 4.91e-14 | 427 |
fibroblast | 1.13e-12 | 76 |
somatic stem cell | 1.51e-12 | 433 |
mesenchymal cell | 1.63e-12 | 354 |
stem cell | 4.60e-12 | 441 |
skin fibroblast | 1.07e-10 | 23 |
motile cell | 1.67e-09 | 386 |
extraembryonic cell | 3.53e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.32e-15 | 371 |
mesoderm | 1.61e-07 | 315 |
mesoderm-derived structure | 1.61e-07 | 315 |
presumptive mesoderm | 1.61e-07 | 315 |
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