FFCP PHASE1:Hg19::chr6:29911185..29911196,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3105|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4931|TSSclassifier=S|UniProt=Q29947|association_with_transcript=93bp_to_M27539_5end|description=CAGE_peak_9_at_HLA-A_5end|id=chr6:29911185..29911196,+|ontology_enrichment_celltype=CL:0000738!1.20e-16!140;CL:0002087!1.30e-16!119;CL:0002031!3.10e-14!124;CL:0002057!6.51e-13!42;CL:0002194!2.36e-12!63;CL:0000576!2.36e-12!63;CL:0000040!2.36e-12!63;CL:0000559!2.36e-12!63;CL:0000037!2.62e-12!172;CL:0000566!2.62e-12!172;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0002009!1.18e-11!65;CL:0000766!1.21e-11!76;CL:0000988!1.23e-11!182;CL:0000839!1.25e-11!70;CL:0000860!1.75e-11!45;CL:0000557!2.58e-11!71;CL:0000763!1.56e-07!112;CL:0000049!1.56e-07!112|ontology_enrichment_celltype_v019=CL:0000860;7.59e-30;33!CL:0002057;7.59e-30;33!CL:0000473;2.85e-27;39!CL:0000234;2.85e-27;39!CL:0000576;7.72e-16;48!CL:0000766;4.42e-13;69!CL:0000763;1.95e-08;100!CL:0002087;2.52e-07;104|ontology_enrichment_celltype_v019_2=CL:0000473,3.67e-32,48;CL:0000234,3.67e-32,48;CL:0000860,1.25e-28,42;CL:0002057,1.25e-28,42;CL:0002194,5.19e-25,59;CL:0000576,5.19e-25,59;CL:0000040,5.19e-25,59;CL:0000559,5.19e-25,59;CL:0002009,4.34e-24,61;CL:0000766,1.27e-22,72;CL:0000839,5.05e-22,66;CL:0000557,1.20e-21,67;CL:0002087,3.96e-16,115;CL:0002031,2.74e-15,120;CL:0000738,1.22e-14,136;CL:0000763,6.80e-14,108;CL:0000049,6.80e-14,108;CL:0002032,1.05e-11,161;CL:0000837,1.05e-11,161;CL:0000037,4.86e-11,168;CL:0000988,2.91e-10,177|ontology_enrichment_development_v019=CL:0002057;5.87e-25;42!UBERON:0006242;3.72e-07;1!CL:0000049;9.85e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.43e-11!102;UBERON:0003061!4.43e-11!102;UBERON:0002193!8.73e-11!112;UBERON:0002371!1.21e-09!80;UBERON:0002405!1.82e-09!115;UBERON:0001474!7.35e-09!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-18,76;UBERON:0001474,4.36e-17,82;UBERON:0004765,2.86e-15,90;UBERON:0002405,1.14e-14,93;UBERON:0002390,9.49e-14,98;UBERON:0003061,9.49e-14,98;UBERON:0001434,2.09e-13,100;UBERON:0002193,3.66e-12,108|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0.647787332037959,0,0.872389432677388,1.13362783106643,0,1.39457422143411,0.411167888021826,0,2.01384674625505,1.7931249457037,0.236482229888585,1.03423704220986,1.93645405075148,0,1.31769637679823,1.09162460023138,0.224723484445085,3.97909060082173,0.641858054152187,0,0,1.99463657621632,0,1.16083695451434,0.56738522469114,0,0.75374599577023,2.60741459210101,0,1.81619850790011,2.20966581592539,0,0,0.425208599930087,0,0.22465726229299,0.600707571366025,0,0,1.39241674039363,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,1.02800749499755,1.17030546773475,1.30368906653436,0,0,0.779873198196215,0.883817722424512,2.21533894583621,0,3.45846563259323,0,2.13769275984779,0,0.289803085735052,1.03800594213442,0.535081656179426,0,0.113309342697566,0.766440987203842,1.71813722741315,0,0,0,0,0.150575119077773,0.76791966692651,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0,0.649094787309367,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.491337269247072,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0.434343920002738,0,0,0.112085143993527,0.197030760201927,1.2937654491571,0.128343036279748,0,0,0,0,0.637938751653163,2.99602809578873,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3105 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4931 | |||
|TSSclassifier=S | |||
|UniProt=Q29947 | |||
|association_with_transcript=93bp_to_M27539_5end | |||
|description=CAGE_peak_9_at_HLA-A_5end | |||
|id=chr6:29911185..29911196,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.20e-16!140;CL:0002087!1.30e-16!119;CL:0002031!3.10e-14!124;CL:0002057!6.51e-13!42;CL:0002194!2.36e-12!63;CL:0000576!2.36e-12!63;CL:0000040!2.36e-12!63;CL:0000559!2.36e-12!63;CL:0000037!2.62e-12!172;CL:0000566!2.62e-12!172;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0002009!1.18e-11!65;CL:0000766!1.21e-11!76;CL:0000988!1.23e-11!182;CL:0000839!1.25e-11!70;CL:0000860!1.75e-11!45;CL:0000557!2.58e-11!71;CL:0000763!1.56e-07!112;CL:0000049!1.56e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.59e-30;33!CL:0002057;7.59e-30;33!CL:0000473;2.85e-27;39!CL:0000234;2.85e-27;39!CL:0000576;7.72e-16;48!CL:0000766;4.42e-13;69!CL:0000763;1.95e-08;100!CL:0002087;2.52e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.67e-32,48;CL:0000234,3.67e-32,48;CL:0000860,1.25e-28,42;CL:0002057,1.25e-28,42;CL:0002194,5.19e-25,59;CL:0000576,5.19e-25,59;CL:0000040,5.19e-25,59;CL:0000559,5.19e-25,59;CL:0002009,4.34e-24,61;CL:0000766,1.27e-22,72;CL:0000839,5.05e-22,66;CL:0000557,1.20e-21,67;CL:0002087,3.96e-16,115;CL:0002031,2.74e-15,120;CL:0000738,1.22e-14,136;CL:0000763,6.80e-14,108;CL:0000049,6.80e-14,108;CL:0002032,1.05e-11,161;CL:0000837,1.05e-11,161;CL:0000037,4.86e-11,168;CL:0000988,2.91e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.87e-25;42!UBERON:0006242;3.72e-07;1!CL:0000049;9.85e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.43e-11!102;UBERON:0003061!4.43e-11!102;UBERON:0002193!8.73e-11!112;UBERON:0002371!1.21e-09!80;UBERON:0002405!1.82e-09!115;UBERON:0001474!7.35e-09!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-18,76;UBERON:0001474,4.36e-17,82;UBERON:0004765,2.86e-15,90;UBERON:0002405,1.14e-14,93;UBERON:0002390,9.49e-14,98;UBERON:0003061,9.49e-14,98;UBERON:0001434,2.09e-13,100;UBERON:0002193,3.66e-12,108 | |||
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|short_description=p9@HLA-A | |||
}} |
Revision as of 19:58, 13 September 2013
Short description: | p9@HLA-A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_HLA-A_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_M27539_5end |
EntrezGene: | HLA-A |
HGNC: | 4931 |
UniProt: | Q29947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.67e-32 | 48 |
phagocyte | 3.67e-32 | 48 |
classical monocyte | 1.25e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-28 | 42 |
monopoietic cell | 5.19e-25 | 59 |
monocyte | 5.19e-25 | 59 |
monoblast | 5.19e-25 | 59 |
promonocyte | 5.19e-25 | 59 |
macrophage dendritic cell progenitor | 4.34e-24 | 61 |
myeloid leukocyte | 1.27e-22 | 72 |
myeloid lineage restricted progenitor cell | 5.05e-22 | 66 |
granulocyte monocyte progenitor cell | 1.20e-21 | 67 |
nongranular leukocyte | 3.96e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.74e-15 | 120 |
leukocyte | 1.22e-14 | 136 |
myeloid cell | 6.80e-14 | 108 |
common myeloid progenitor | 6.80e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.05e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-11 | 161 |
hematopoietic stem cell | 4.86e-11 | 168 |
hematopoietic cell | 2.91e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-18 | 76 |
bone element | 4.36e-17 | 82 |
skeletal element | 2.86e-15 | 90 |
immune system | 1.14e-14 | 93 |
hematopoietic system | 9.49e-14 | 98 |
blood island | 9.49e-14 | 98 |
skeletal system | 2.09e-13 | 100 |
hemolymphoid system | 3.66e-12 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.