FFCP PHASE1:Mm9::chr1:74033368..74033376,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2316|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:74033368..74033376,-|id=chr1:74033368..74033376,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.15e-10!18;UBERON:0000948!2.15e-10!18;UBERON:0005498!2.15e-10!18;UBERON:0004140!2.15e-10!18;UBERON:0009881!2.15e-10!18;UBERON:0004141!2.15e-10!18;UBERON:0003084!2.15e-10!18;UBERON:0007005!2.15e-10!18;UBERON:0004139!2.15e-10!18;UBERON:0004291!2.15e-10!18;UBERON:0004872!7.16e-09!33;UBERON:0004535!2.29e-08!23;UBERON:0001009!2.29e-08!23;UBERON:0002048!3.76e-08!14;UBERON:0000117!3.76e-08!14;UBERON:0000171!3.76e-08!14;UBERON:0000170!3.76e-08!14;UBERON:0005597!3.76e-08!14;UBERON:0000118!3.76e-08!14;UBERON:0003103!4.73e-08!43;UBERON:0000926!9.27e-08!193;UBERON:0004120!9.27e-08!193;UBERON:0006603!9.27e-08!193;UBERON:0005153!5.56e-07!17;UBERON:0005157!6.48e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.31e-12,14;UBERON:0000117,3.31e-12,14;UBERON:0000171,3.31e-12,14;UBERON:0000170,3.31e-12,14;UBERON:0005597,3.31e-12,14;UBERON:0000118,3.31e-12,14;UBERON:0005153,4.76e-10,17;UBERON:0005178,4.76e-10,17;UBERON:0005181,4.76e-10,17;UBERON:0002224,4.76e-10,17;UBERON:0000915,4.76e-10,17;UBERON:0008947,4.76e-10,17;UBERON:0003258,4.76e-10,17;UBERON:0005157,1.56e-08,20;UBERON:0002113,3.48e-08,14;UBERON:0003918,3.48e-08,14;UBERON:0011143,3.48e-08,14;UBERON:0005095,3.48e-08,14;UBERON:0007687,3.48e-08,14;UBERON:0005177,1.15e-07,79;UBERON:0009569,1.43e-07,66|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0.407357455401265,0.248813941220186,0,0,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.697601834251224,0.804820204198858,0.817357396570186,0.822799249567402,0.820837320395476,0.810688095458557,1.16959989940266,0.658650345873152,1.34206418760372,0,0,0,0,0,0.696710015581316,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,1.01825663922657,0.775809948670503,0.420814919341911,0.505892296994058,3.39503340353085,2.82597710114475,2.46794327843601,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0.488894929326078,0.169745085775188,1.40814148973101,0.335012514883631,0.714130922658041,3.90267295715598,0.472905432318573,0.8858587585951,0.956728611944923,2.29408640602033,2.41758974612254,1.01254341007058,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.164970122972535,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.658196082408484,0,0.469343416127421,0.21183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.120625849856312,0.477489376012546,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0.565105371014073,0,0,0,0.139951452323658,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0.192075457214608,0.114870937911227,0,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,1.71434626192708,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr1:74033368..74033376,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2316 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:74033368..74033376,- | |||
|id=chr1:74033368..74033376,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.15e-10!18;UBERON:0000948!2.15e-10!18;UBERON:0005498!2.15e-10!18;UBERON:0004140!2.15e-10!18;UBERON:0009881!2.15e-10!18;UBERON:0004141!2.15e-10!18;UBERON:0003084!2.15e-10!18;UBERON:0007005!2.15e-10!18;UBERON:0004139!2.15e-10!18;UBERON:0004291!2.15e-10!18;UBERON:0004872!7.16e-09!33;UBERON:0004535!2.29e-08!23;UBERON:0001009!2.29e-08!23;UBERON:0002048!3.76e-08!14;UBERON:0000117!3.76e-08!14;UBERON:0000171!3.76e-08!14;UBERON:0000170!3.76e-08!14;UBERON:0005597!3.76e-08!14;UBERON:0000118!3.76e-08!14;UBERON:0003103!4.73e-08!43;UBERON:0000926!9.27e-08!193;UBERON:0004120!9.27e-08!193;UBERON:0006603!9.27e-08!193;UBERON:0005153!5.56e-07!17;UBERON:0005157!6.48e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.31e-12,14;UBERON:0000117,3.31e-12,14;UBERON:0000171,3.31e-12,14;UBERON:0000170,3.31e-12,14;UBERON:0005597,3.31e-12,14;UBERON:0000118,3.31e-12,14;UBERON:0005153,4.76e-10,17;UBERON:0005178,4.76e-10,17;UBERON:0005181,4.76e-10,17;UBERON:0002224,4.76e-10,17;UBERON:0000915,4.76e-10,17;UBERON:0008947,4.76e-10,17;UBERON:0003258,4.76e-10,17;UBERON:0005157,1.56e-08,20;UBERON:0002113,3.48e-08,14;UBERON:0003918,3.48e-08,14;UBERON:0011143,3.48e-08,14;UBERON:0005095,3.48e-08,14;UBERON:0007687,3.48e-08,14;UBERON:0005177,1.15e-07,79;UBERON:0009569,1.43e-07,66 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0.407357455401265,0.248813941220186,0,0,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.697601834251224,0.804820204198858,0.817357396570186,0.822799249567402,0.820837320395476,0.810688095458557,1.16959989940266,0.658650345873152,1.34206418760372,0,0,0,0,0,0.696710015581316,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,1.01825663922657,0.775809948670503,0.420814919341911,0.505892296994058,3.39503340353085,2.82597710114475,2.46794327843601,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0.488894929326078,0.169745085775188,1.40814148973101,0.335012514883631,0.714130922658041,3.90267295715598,0.472905432318573,0.8858587585951,0.956728611944923,2.29408640602033,2.41758974612254,1.01254341007058,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.164970122972535,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.658196082408484,0,0.469343416127421,0.21183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.120625849856312,0.477489376012546,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0.565105371014073,0,0,0,0.139951452323658,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0.192075457214608,0.114870937911227,0,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,1.71434626192708,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr1:74033368..74033376,- | |||
}} |
Revision as of 20:53, 13 September 2013
Short description: | p@chr1:74033368..74033376, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74033368..74033376, - |
Coexpression cluster: | MCL_coexpression_mm9:2316 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.31e-12 | 14 |
respiratory tube | 3.31e-12 | 14 |
respiration organ | 3.31e-12 | 14 |
pair of lungs | 3.31e-12 | 14 |
lung primordium | 3.31e-12 | 14 |
lung bud | 3.31e-12 | 14 |
epithelial bud | 4.76e-10 | 17 |
thoracic cavity element | 4.76e-10 | 17 |
thoracic segment organ | 4.76e-10 | 17 |
thoracic cavity | 4.76e-10 | 17 |
thoracic segment of trunk | 4.76e-10 | 17 |
respiratory primordium | 4.76e-10 | 17 |
endoderm of foregut | 4.76e-10 | 17 |
epithelial fold | 1.56e-08 | 20 |
kidney | 3.48e-08 | 14 |
kidney mesenchyme | 3.48e-08 | 14 |
upper urinary tract | 3.48e-08 | 14 |
kidney rudiment | 3.48e-08 | 14 |
kidney field | 3.48e-08 | 14 |
trunk region element | 1.15e-07 | 79 |
subdivision of trunk | 1.43e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.