FFCP PHASE1:Hg19::chr6:42981635..42981646,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6986 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=13bp_to_uc010jyc.1_5end | |||
|description=CAGE_peak_3_at_MEA1_5end | |||
|id=chr6:42981635..42981646,- | |||
|ontology_enrichment_celltype=CL:0000055!5.04e-14!180;CL:0000183!1.70e-10!59;CL:0000393!1.63e-09!60;CL:0000211!1.63e-09!60;CL:0000187!4.91e-09!54;CL:0000680!9.15e-09!57;CL:0000056!9.15e-09!57;CL:0000355!9.15e-09!57;CL:0002321!1.85e-08!248;CL:0000220!1.98e-08!246;CL:0000222!2.31e-08!119;CL:0000359!3.05e-08!32;CL:0000192!3.25e-08!42;CL:0000514!3.25e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.27e-09,32;CL:0000187,1.38e-08,55;CL:0000393,2.11e-08,61;CL:0000211,2.11e-08,61;CL:0000680,4.12e-08,58;CL:0000056,4.12e-08,58;CL:0000355,4.12e-08,58;CL:0000192,1.54e-07,43;CL:0000514,1.54e-07,43;CL:0000222,5.30e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.13e-07;32!UBERON:0003528;2.77e-07;34!UBERON:0002020;2.77e-07;34!UBERON:0000956;5.00e-07;25!UBERON:0000203;5.00e-07;25!UBERON:0001893;5.46e-07;34!UBERON:0002791;5.52e-07;32 | |||
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| |||
|short_description=p3@MEA1 | |||
}} |
Revision as of 21:04, 13 September 2013
Short description: | p3@MEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MEA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_uc010jyc.1_5end |
EntrezGene: | MEA1 |
HGNC: | 6986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.27e-09 | 32 |
muscle cell | 1.38e-08 | 55 |
electrically responsive cell | 2.11e-08 | 61 |
electrically active cell | 2.11e-08 | 61 |
muscle precursor cell | 4.12e-08 | 58 |
myoblast | 4.12e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.12e-08 | 58 |
smooth muscle cell | 1.54e-07 | 43 |
smooth muscle myoblast | 1.54e-07 | 43 |
mesodermal cell | 5.30e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
tube | 1.73e-12 | 192 |
cell layer | 1.52e-10 | 309 |
epithelial vesicle | 1.53e-10 | 78 |
epithelium | 1.86e-10 | 306 |
cerebral hemisphere | 8.13e-09 | 32 |
paraxial mesoderm | 9.15e-09 | 72 |
presumptive paraxial mesoderm | 9.15e-09 | 72 |
epithelial tube | 1.41e-08 | 117 |
dense mesenchyme tissue | 1.90e-08 | 73 |
brain grey matter | 2.00e-08 | 34 |
gray matter | 2.00e-08 | 34 |
somite | 2.52e-08 | 71 |
presomitic mesoderm | 2.52e-08 | 71 |
presumptive segmental plate | 2.52e-08 | 71 |
dermomyotome | 2.52e-08 | 71 |
trunk paraxial mesoderm | 2.52e-08 | 71 |
artery | 6.89e-08 | 42 |
arterial blood vessel | 6.89e-08 | 42 |
arterial system | 6.89e-08 | 42 |
anatomical conduit | 8.06e-08 | 240 |
telencephalon | 8.49e-08 | 34 |
regional part of telencephalon | 1.04e-07 | 32 |
epithelial tube open at both ends | 1.32e-07 | 59 |
blood vessel | 1.32e-07 | 59 |
blood vasculature | 1.32e-07 | 59 |
vascular cord | 1.32e-07 | 59 |
multilaminar epithelium | 4.41e-07 | 83 |
cerebral cortex | 7.37e-07 | 25 |
pallium | 7.37e-07 | 25 |
skeletal muscle tissue | 7.91e-07 | 62 |
striated muscle tissue | 7.91e-07 | 62 |
myotome | 7.91e-07 | 62 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.