FFCP PHASE1:Hg19::chr6:47666275..47666296,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221393|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19011|TSSclassifier=S|UniProt=Q8IZF3|association_with_transcript=0bp_to_ENST00000283303,ENST00000327753,NM_153838,uc003oza.1,uc003ozb.1_5end|coexpression_cluster_id=C4610|description=CAGE_peak_3_at_GPR115_5end|id=chr6:47666275..47666296,+|ontology_enrichment_celltype=CL:0000066!1.43e-19!254;CL:0002076!2.84e-19!43;CL:0000223!1.90e-16!59;CL:0002251!3.34e-11!21;CL:0002368!1.79e-08!13|ontology_enrichment_celltype_v019=CL:0002541;4.02e-14;3!CL:0002621;7.67e-14;3!CL:0002166;3.58e-13;3!CL:0002076;1.60e-11;42!CL:0000349;1.66e-10;19!CL:0002368;1.32e-07;13!CL:0002159;3.32e-07;14!CL:0002251;4.60e-07;20|ontology_enrichment_celltype_v019_2=CL:0002541,4.04e-14,3;CL:0002621,7.08e-14,3;CL:0002076,7.28e-14,42;CL:0002166,3.83e-13,3;CL:0000223,1.26e-12,58;CL:0000349,1.43e-10,19;CL:0000066,2.57e-09,253;CL:0002368,1.37e-07,13;CL:0002159,4.03e-07,14;CL:0002251,4.72e-07,20|ontology_enrichment_development_v019=CL:0000223;2.17e-07;58|ontology_enrichment_disease=DOID:1749!1.96e-12!14;DOID:305!1.15e-08!106|ontology_enrichment_disease_v019=DOID:5093;9.22e-10;4!DOID:1612;9.22e-10;4|ontology_enrichment_disease_v019_2=DOID:5093,1.29e-09,4;DOID:1612,1.29e-09,4|ontology_enrichment_uberon=UBERON:0005631!1.14e-15!14;UBERON:0000158!1.14e-15!14;UBERON:0004119!1.36e-15!169;UBERON:0000925!1.36e-15!169;UBERON:0006595!1.36e-15!169;UBERON:0005156!1.22e-12!59;UBERON:0000990!1.22e-12!59;UBERON:0003124!9.01e-12!7;UBERON:0003134!5.86e-11!37;UBERON:0000474!5.86e-11!37;UBERON:0000161!8.73e-11!35;UBERON:0003100!1.87e-10!41;UBERON:0001007!3.48e-10!155;UBERON:0001555!3.48e-10!155;UBERON:0007026!3.48e-10!155;UBERON:0000077!1.69e-09!130;UBERON:0000344!5.01e-09!12;UBERON:0003133!5.78e-09!48;UBERON:0005911!6.08e-09!82;UBERON:0004921!1.31e-08!129;UBERON:0004185!1.31e-08!129;UBERON:0004923!1.49e-08!57;UBERON:0001004!1.94e-08!72;UBERON:0000478!1.09e-07!24;UBERON:0005795!1.29e-07!22;UBERON:0000065!2.69e-07!53;UBERON:0003929!4.05e-07!54;UBERON:0001987!5.18e-07!4;UBERON:0004340!5.18e-07!4;UBERON:0000062!6.86e-07!511;UBERON:0000995!9.79e-07!21|ontology_enrichment_uberon_v019=UBERON:0005631;1.95e-15;10!UBERON:0000158;1.95e-15;10!UBERON:0003124;4.02e-14;3!UBERON:0000920;4.02e-14;3!UBERON:0001949;7.67e-14;3!UBERON:0000478;2.20e-10;24!UBERON:0001708;5.39e-10;4!UBERON:0008895;5.39e-10;4!UBERON:0003929;5.41e-10;7!UBERON:0006562;6.27e-09;2!UBERON:0003350;9.51e-09;8!UBERON:0011159;4.43e-08;5!UBERON:0000344;6.07e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.81e-19,14;UBERON:0000158,6.81e-19,14;UBERON:0003124,1.51e-15,7;UBERON:0000920,4.04e-14,3;UBERON:0001949,7.08e-14,3;UBERON:0000478,1.91e-10,24;UBERON:0001708,5.66e-10,4;UBERON:0008895,5.66e-10,4;UBERON:0004923,1.39e-09,66;UBERON:0003350,8.36e-09,8;UBERON:0011159,4.61e-08,5;UBERON:0000344,5.72e-07,20;UBERON:0010188,8.76e-07,6;UBERON:0002539,8.76e-07,6;UBERON:0008816,8.76e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,1.74753097704138,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63826047591912,3.00020732649918,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,1.59884970106048,0,2.19500570817251,0,0.804231779293047,0.648119116109707,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,2.81201501960331,2.01578553838631,1.41775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,4.99306318531491,0.907170879989041,0,0,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.725156697549733,2.80709058424599,1.93370076765382,0.114814448164607,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,3.8015530533025,1.34533047155574,1.65896526242959,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59101623962968,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,0.670302275535787,0,0.282431402330337,0.86101074534246,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.78852387424529,0.890894042497916,14.1293922965647,0,0,0.333926115068718,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221393 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19011 | |||
|TSSclassifier=S | |||
|UniProt=Q8IZF3 | |||
|association_with_transcript=0bp_to_ENST00000283303,ENST00000327753,NM_153838,uc003oza.1,uc003ozb.1_5end | |||
|coexpression_cluster_id=C4610 | |||
|description=CAGE_peak_3_at_GPR115_5end | |||
|id=chr6:47666275..47666296,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.43e-19!254;CL:0002076!2.84e-19!43;CL:0000223!1.90e-16!59;CL:0002251!3.34e-11!21;CL:0002368!1.79e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.02e-14;3!CL:0002621;7.67e-14;3!CL:0002166;3.58e-13;3!CL:0002076;1.60e-11;42!CL:0000349;1.66e-10;19!CL:0002368;1.32e-07;13!CL:0002159;3.32e-07;14!CL:0002251;4.60e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.04e-14,3;CL:0002621,7.08e-14,3;CL:0002076,7.28e-14,42;CL:0002166,3.83e-13,3;CL:0000223,1.26e-12,58;CL:0000349,1.43e-10,19;CL:0000066,2.57e-09,253;CL:0002368,1.37e-07,13;CL:0002159,4.03e-07,14;CL:0002251,4.72e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;2.17e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.96e-12!14;DOID:305!1.15e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;9.22e-10;4!DOID:1612;9.22e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.29e-09,4;DOID:1612,1.29e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.14e-15!14;UBERON:0000158!1.14e-15!14;UBERON:0004119!1.36e-15!169;UBERON:0000925!1.36e-15!169;UBERON:0006595!1.36e-15!169;UBERON:0005156!1.22e-12!59;UBERON:0000990!1.22e-12!59;UBERON:0003124!9.01e-12!7;UBERON:0003134!5.86e-11!37;UBERON:0000474!5.86e-11!37;UBERON:0000161!8.73e-11!35;UBERON:0003100!1.87e-10!41;UBERON:0001007!3.48e-10!155;UBERON:0001555!3.48e-10!155;UBERON:0007026!3.48e-10!155;UBERON:0000077!1.69e-09!130;UBERON:0000344!5.01e-09!12;UBERON:0003133!5.78e-09!48;UBERON:0005911!6.08e-09!82;UBERON:0004921!1.31e-08!129;UBERON:0004185!1.31e-08!129;UBERON:0004923!1.49e-08!57;UBERON:0001004!1.94e-08!72;UBERON:0000478!1.09e-07!24;UBERON:0005795!1.29e-07!22;UBERON:0000065!2.69e-07!53;UBERON:0003929!4.05e-07!54;UBERON:0001987!5.18e-07!4;UBERON:0004340!5.18e-07!4;UBERON:0000062!6.86e-07!511;UBERON:0000995!9.79e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.95e-15;10!UBERON:0000158;1.95e-15;10!UBERON:0003124;4.02e-14;3!UBERON:0000920;4.02e-14;3!UBERON:0001949;7.67e-14;3!UBERON:0000478;2.20e-10;24!UBERON:0001708;5.39e-10;4!UBERON:0008895;5.39e-10;4!UBERON:0003929;5.41e-10;7!UBERON:0006562;6.27e-09;2!UBERON:0003350;9.51e-09;8!UBERON:0011159;4.43e-08;5!UBERON:0000344;6.07e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.81e-19,14;UBERON:0000158,6.81e-19,14;UBERON:0003124,1.51e-15,7;UBERON:0000920,4.04e-14,3;UBERON:0001949,7.08e-14,3;UBERON:0000478,1.91e-10,24;UBERON:0001708,5.66e-10,4;UBERON:0008895,5.66e-10,4;UBERON:0004923,1.39e-09,66;UBERON:0003350,8.36e-09,8;UBERON:0011159,4.61e-08,5;UBERON:0000344,5.72e-07,20;UBERON:0010188,8.76e-07,6;UBERON:0002539,8.76e-07,6;UBERON:0008816,8.76e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,1.74753097704138,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63826047591912,3.00020732649918,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,1.59884970106048,0,2.19500570817251,0,0.804231779293047,0.648119116109707,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,2.81201501960331,2.01578553838631,1.41775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,4.99306318531491,0.907170879989041,0,0,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.725156697549733,2.80709058424599,1.93370076765382,0.114814448164607,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,3.8015530533025,1.34533047155574,1.65896526242959,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59101623962968,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,0.670302275535787,0,0.282431402330337,0.86101074534246,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.78852387424529,0.890894042497916,14.1293922965647,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.269605053441981,1.79021174675609,0,0.295930216910801,0,0,0,0,0,1.04171104434093,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,4.87983104975112,1.07730361905316,0.113942055847001,0,0.269272933229316,0,4.46601623624687,3.84709892287822,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,2.73930466504926,0,0,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,3.13575671726008,0.870592065804026,0,0,0,0,0,1.26085721434945,0,0,0,0,0,1.36885967914362,0,0,0.19980960958213,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,2.1964690054889,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.899895566206002,8.51182150013745,0,1.34173875039706,0,0,0,0,0.191915197319445,0,0,0,0,0,0.979762080328227,0,0,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,1.24411862352257,0,0,0.450772826991655,0,0,0,0.644463342254931,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,2.65771064666944,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0.550285795565037,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,1.14986184875636,0,0,0,0,1.50794029276486,0,0,0,0,0,0.444925607568277,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,3.45629830907046,0,0,0,0,0.9164274741762,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0.971421986118279,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.70587185520785,0,0,0.124149428591716,0,0,0,1.74173398317569,0.342233301085281,1.81850543139386,0.645499848534087,0,0.814032686109745,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p3@GPR115 | |||
}} |
Revision as of 21:19, 13 September 2013
Short description: | p3@GPR115 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GPR115_5end |
Coexpression cluster: | C4610_amniotic_immature_cervical_chorionic_Gingival_nasal_epidermoid |
Association with transcript: | 0bp_to_ENST00000283303, ENST00000327753, NM_153838, uc003oza.1, uc003ozb.1_5end |
EntrezGene: | GPR115 |
HGNC: | 19011 |
UniProt: | Q8IZF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.04e-14 | 3 |
gingival epithelial cell | 7.08e-14 | 3 |
endo-epithelial cell | 7.28e-14 | 42 |
epithelial cell of Malassez | 3.83e-13 | 3 |
endodermal cell | 1.26e-12 | 58 |
extraembryonic cell | 1.43e-10 | 19 |
epithelial cell | 2.57e-09 | 253 |
respiratory epithelial cell | 1.37e-07 | 13 |
general ecto-epithelial cell | 4.03e-07 | 14 |
epithelial cell of alimentary canal | 4.72e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.81e-19 | 14 |
membranous layer | 6.81e-19 | 14 |
chorion | 1.51e-15 | 7 |
egg chorion | 4.04e-14 | 3 |
gingival epithelium | 7.08e-14 | 3 |
extraembryonic structure | 1.91e-10 | 24 |
jaw skeleton | 5.66e-10 | 4 |
splanchnocranium | 5.66e-10 | 4 |
organ component layer | 1.39e-09 | 66 |
epithelium of mucosa | 8.36e-09 | 8 |
primary subdivision of cranial skeletal system | 4.61e-08 | 5 |
mucosa | 5.72e-07 | 20 |
protuberance | 8.76e-07 | 6 |
pharyngeal arch | 8.76e-07 | 6 |
embryonic head | 8.76e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.29e-09 | 4 |
breast cancer | 1.29e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.