FFCP PHASE1:Hg19::chr7:108210201..108210220,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6968|TSSclassifier=S|UniProt=Q6FIF1,Q9UBS3|association_with_transcript=12bp_to_NM_012328_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_DNAJB9_5end|id=chr7:108210201..108210220,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000815;7.02e-19;2!CL:0000792;7.02e-19;2!CL:0002677;7.02e-19;2!CL:0000898;6.58e-13;3!CL:0000624;7.05e-07;6|ontology_enrichment_celltype_v019_2=CL:0000815,5.37e-19,2;CL:0000792,5.37e-19,2;CL:0002677,5.37e-19,2;CL:0000898,5.51e-13,3;CL:0000624,6.46e-07,6|ontology_enrichment_development_v019=UBERON:0008801;7.22e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.51e-09!115|ontology_enrichment_uberon_v019=UBERON:0001831;7.22e-10;1!UBERON:0001567;7.22e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0001831,8.99e-10,1;UBERON:0001567,8.99e-10,1;UBERON:0008801,8.99e-10,1|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0.369754010166788,0.232401601740905,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0.633765858935825,0.212604299965044,0,1.01095768031846,0,0.32145117339416,1.42506371870624,0.19891667719909,0,0,1.09227722252426,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,2.67498392625085,2.93330039970231,0.473447805734733,0,2.00538822393312,3.82987679717288,0,0,0,0.130059347559878,0.164437904603676,0,2.02862160014537,0.444859689486181,0,0,1.69964014046349,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0.087834785693126,5.43563163315507,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0,0.506328996723799,0,0,0.0920498986422993,0,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0,0.720599767084807,0.12624243342638,0.126995788584338,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.348631135379878,0.241718899183244,0.200506470303285,0.184161977871793,0.229628896329213,0,0.131124414959424,0.902399225814824,0.770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,1.30151357865721,0.103041011647722,0,0,0,0,0,0.193341436584244,0.462145851343933,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.330569830721956,0.192190067365106,0,0.4046311234222,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0.222886768554957,0,0.23874448473769,0.890894042497916,0.614321404198464,0,0,0.111308705022906,0.494411622680279,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0.663475559587348,0,0.658156191461918,0.10893846351899,0.139423744278603,0.923403102045565,0.227884111694002,0.23056390438806,0.179515288819544,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0,0.335643173951685,0.37950746544837,0,0,0.163232808159148,0.282706142867882,0,0,0,1.22206028986725,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0,0.189559738885464,0.450970258243478,0.207376382794494,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0,0,0.17472666824203,0,0,0.146178634172371,0,0,0.0882561266915003,0.677942222341597,0,0,0.569797163602908,0,0.320635281006135,0.213452994739353,0,0.144090417154106,0,0,1.1524383839052,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0.410716136675979,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.268733889946905,0.720599767084807,2.32991899054908,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.157363764404994,0.633602019116439,0.179287339332845,0.575745591958336,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0.366078794705889,0.1251909307065,0,0.443716206147409,0.558867626472451,0.276697269872462,0.249960815924213,0,0.285465333544967,0.235265819698172,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0.260994291965212,0.453411851024545,0,0,0,0,0,0.176689145945881,0,0.337884881306145,0,0.345430341731199,0,0.138258436151731,0.584580926518165,0.664324201566815,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,1.53867458491389,0,0,0,0.314531883711793,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.321146125482298,0,0,0.615349092722265,0,0.414943514785307,0.484426936895553,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0.451261970095544,0.20170506870352,0,0,0.163771917510097,0,0.337687923091973,0,0.620060389503552,0,0.546974809018219,1.09651553371436,0.496211178389294,0,0.383287282918786,0,0.336283722218824,0.606965604236632,0.455324382702595,0.620916591138472,0,0,0.475788130837822,0.263091094251396,0,0,0.39246546425257,0.157115589916002,0,0,0,0.47775168788705,0.571812353413251,0,0.116241425368125,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.236664001461131,0.0852134047591577,0,0,0,0.955538938977433,0.111855431797792,0,0.121917924982269,0.647428837187895,2.36124455769368,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0.22589216407792,0.439762066981716,0.301925687133347,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.128915775947154,0.0999411559249289,0,0,0.240724100067505,0.730336388246517,0,0.286679166302903,0,0,0,0.5290268405154,0,2.31087814315709,0,0.126166424835079,0,0.126698501011437,0,0.534434810531121,0.18378979906969,0.752122617877125,8.41143550222457,23.8488075838999,0.829169439458779,0.620597975171371,0.213233981900981,0.952257725854961,0,0,0.224263725161227,0.12729431655633,0,0.217716747896961,0,0.404112318087525,0.215166616178029,0,0.162806537221949,0.213454691755431,0,0.269475606319761,0,0.977931553462932,0,0.665756774185513,0.402547587182052,0|short_description=p3@DNAJB9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6968 | |||
|TSSclassifier=S | |||
|UniProt=Q6FIF1,Q9UBS3 | |||
|association_with_transcript=12bp_to_NM_012328_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_DNAJB9_5end | |||
|id=chr7:108210201..108210220,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000815;7.02e-19;2!CL:0000792;7.02e-19;2!CL:0002677;7.02e-19;2!CL:0000898;6.58e-13;3!CL:0000624;7.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.37e-19,2;CL:0000792,5.37e-19,2;CL:0002677,5.37e-19,2;CL:0000898,5.51e-13,3;CL:0000624,6.46e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;7.22e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;7.22e-10;1!UBERON:0001567;7.22e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,8.99e-10,1;UBERON:0001567,8.99e-10,1;UBERON:0008801,8.99e-10,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0.369754010166788,0.232401601740905,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0.633765858935825,0.212604299965044,0,1.01095768031846,0,0.32145117339416,1.42506371870624,0.19891667719909,0,0,1.09227722252426,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,2.67498392625085,2.93330039970231,0.473447805734733,0,2.00538822393312,3.82987679717288,0,0,0,0.130059347559878,0.164437904603676,0,2.02862160014537,0.444859689486181,0,0,1.69964014046349,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0.087834785693126,5.43563163315507,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0,0.506328996723799,0,0,0.0920498986422993,0,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0,0.720599767084807,0.12624243342638,0.126995788584338,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.348631135379878,0.241718899183244,0.200506470303285,0.184161977871793,0.229628896329213,0,0.131124414959424,0.902399225814824,0.770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,1.30151357865721,0.103041011647722,0,0,0,0,0,0.193341436584244,0.462145851343933,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.330569830721956,0.192190067365106,0,0.4046311234222,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0.222886768554957,0,0.23874448473769,0.890894042497916,0.614321404198464,0,0,0.111308705022906,0.494411622680279,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0.663475559587348,0,0.658156191461918,0.10893846351899,0.139423744278603,0.923403102045565,0.227884111694002,0.23056390438806,0.179515288819544,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0,0.335643173951685,0.37950746544837,0,0,0.163232808159148,0.282706142867882,0,0,0,1.22206028986725,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0,0.189559738885464,0.450970258243478,0.207376382794494,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0,0,0.17472666824203,0,0,0.146178634172371,0,0,0.0882561266915003,0.677942222341597,0,0,0.569797163602908,0,0.320635281006135,0.213452994739353,0,0.144090417154106,0,0,1.1524383839052,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0.410716136675979,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.268733889946905,0.720599767084807,2.32991899054908,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.157363764404994,0.633602019116439,0.179287339332845,0.575745591958336,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0.366078794705889,0.1251909307065,0,0.443716206147409,0.558867626472451,0.276697269872462,0.249960815924213,0,0.285465333544967,0.235265819698172,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0.260994291965212,0.453411851024545,0,0,0,0,0,0.176689145945881,0,0.337884881306145,0,0.345430341731199,0,0.138258436151731,0.584580926518165,0.664324201566815,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,1.53867458491389,0,0,0,0.314531883711793,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.321146125482298,0,0,0.615349092722265,0,0.414943514785307,0.484426936895553,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0.451261970095544,0.20170506870352,0,0,0.163771917510097,0,0.337687923091973,0,0.620060389503552,0,0.546974809018219,1.09651553371436,0.496211178389294,0,0.383287282918786,0,0.336283722218824,0.606965604236632,0.455324382702595,0.620916591138472,0,0,0.475788130837822,0.263091094251396,0,0,0.39246546425257,0.157115589916002,0,0,0,0.47775168788705,0.571812353413251,0,0.116241425368125,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.236664001461131,0.0852134047591577,0,0,0,0.955538938977433,0.111855431797792,0,0.121917924982269,0.647428837187895,2.36124455769368,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0.22589216407792,0.439762066981716,0.301925687133347,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.128915775947154,0.0999411559249289,0,0,0.240724100067505,0.730336388246517,0,0.286679166302903,0,0,0,0.5290268405154,0,2.31087814315709,0,0.126166424835079,0,0.126698501011437,0,0.534434810531121,0.18378979906969,0.752122617877125,8.41143550222457,23.8488075838999,0.829169439458779,0.620597975171371,0.213233981900981,0.952257725854961,0,0,0.224263725161227,0.12729431655633,0,0.217716747896961,0,0.404112318087525,0.215166616178029,0,0.162806537221949,0.213454691755431,0,0.269475606319761,0,0.977931553462932,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p3@DNAJB9 | |||
}} |
Revision as of 22:43, 13 September 2013
Short description: | p3@DNAJB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DNAJB9_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 12bp_to_NM_012328_5end |
EntrezGene: | DNAJB9 |
HGNC: | 6968 |
UniProt: | Q6FIF1Q9UBS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.37e-19 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.37e-19 | 2 |
naive regulatory T cell | 5.37e-19 | 2 |
naive T cell | 5.51e-13 | 3 |
CD4-positive, alpha-beta T cell | 6.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 8.99e-10 | 1 |
cheek | 8.99e-10 | 1 |
parotid gland primordium | 8.99e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.