FFCP PHASE1:Mm9::chr2:26450453..26450465,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:26450453..26450465,-|id=chr2:26450453..26450465,-|ontology_enrichment_celltype=CL:0000239!8.04e-09!6;CL:0000677!8.04e-09!6;CL:0000212!8.04e-09!6;CL:0000584!8.04e-09!6;CL:0000473!1.15e-07!3;CL:0000627!1.15e-07!3;CL:0000682!1.15e-07!3;CL:0000075!1.76e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,4.98e-22,3;CL:0000239,2.45e-18,6;CL:0000677,2.45e-18,6;CL:0000584,2.45e-18,6;CL:0000075,9.09e-16,7;CL:0000066,4.19e-13,25;CL:0002563,2.47e-12,9;CL:0002251,2.47e-12,9;CL:0000473,8.76e-10,7;CL:0002076,1.70e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.07e-15!15;UBERON:0004923!7.25e-14!24;UBERON:0001242!1.48e-11!13;UBERON:0000060!1.48e-11!13;UBERON:0001262!1.48e-11!13;UBERON:0004786!1.48e-11!13;UBERON:0005409!1.17e-09!59;UBERON:0000160!1.94e-09!43|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-21,15;UBERON:0001962,1.23e-14,2;UBERON:0001961,1.23e-14,2;UBERON:0001744,1.23e-14,2;UBERON:0004923,2.03e-13,24;UBERON:0001242,4.55e-13,13;UBERON:0001262,4.55e-13,13;UBERON:0004786,4.55e-13,13;UBERON:0003350,2.47e-12,9;UBERON:0004808,2.47e-12,9;UBERON:0001277,2.47e-12,9;UBERON:0000485,3.86e-10,11;UBERON:0000160,4.22e-10,31;UBERON:0002465,4.52e-10,3;UBERON:0003199,4.80e-08,1|phase1_expression=0,9.07336059862339,9.55498402718026,0.30246421130683,0,2.85394762250213,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.11956809922418,8.25873411841812,11.4846392823004,10.3382879078178,12.0663890304098,0.950117097281869,0.252030129759931,9.09095093686749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,1.33157938278791,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.648414149624083,0.398282546508734,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87345025498471,0.134864346384821,0,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,2.15313255862742,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p@chr2:26450453..26450465,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:26450453..26450465,- | |||
|id=chr2:26450453..26450465,- | |||
|ontology_enrichment_celltype=CL:0000239!8.04e-09!6;CL:0000677!8.04e-09!6;CL:0000212!8.04e-09!6;CL:0000584!8.04e-09!6;CL:0000473!1.15e-07!3;CL:0000627!1.15e-07!3;CL:0000682!1.15e-07!3;CL:0000075!1.76e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.98e-22,3;CL:0000239,2.45e-18,6;CL:0000677,2.45e-18,6;CL:0000584,2.45e-18,6;CL:0000075,9.09e-16,7;CL:0000066,4.19e-13,25;CL:0002563,2.47e-12,9;CL:0002251,2.47e-12,9;CL:0000473,8.76e-10,7;CL:0002076,1.70e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.07e-15!15;UBERON:0004923!7.25e-14!24;UBERON:0001242!1.48e-11!13;UBERON:0000060!1.48e-11!13;UBERON:0001262!1.48e-11!13;UBERON:0004786!1.48e-11!13;UBERON:0005409!1.17e-09!59;UBERON:0000160!1.94e-09!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-21,15;UBERON:0001962,1.23e-14,2;UBERON:0001961,1.23e-14,2;UBERON:0001744,1.23e-14,2;UBERON:0004923,2.03e-13,24;UBERON:0001242,4.55e-13,13;UBERON:0001262,4.55e-13,13;UBERON:0004786,4.55e-13,13;UBERON:0003350,2.47e-12,9;UBERON:0004808,2.47e-12,9;UBERON:0001277,2.47e-12,9;UBERON:0000485,3.86e-10,11;UBERON:0000160,4.22e-10,31;UBERON:0002465,4.52e-10,3;UBERON:0003199,4.80e-08,1 | |||
|phase1_expression=0,9.07336059862339,9.55498402718026,0.30246421130683,0,2.85394762250213,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.11956809922418,8.25873411841812,11.4846392823004,10.3382879078178,12.0663890304098,0.950117097281869,0.252030129759931,9.09095093686749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,1.33157938278791,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.648414149624083,0.398282546508734,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87345025498471,0.134864346384821,0,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,2.15313255862742,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr2:26450453..26450465,- | |||
}} |
Revision as of 23:31, 13 September 2013
Short description: | p@chr2:26450453..26450465, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:26450453..26450465, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.98e-22 | 3 |
brush border epithelial cell | 2.45e-18 | 6 |
gut absorptive cell | 2.45e-18 | 6 |
enterocyte | 2.45e-18 | 6 |
columnar/cuboidal epithelial cell | 9.09e-16 | 7 |
epithelial cell | 4.19e-13 | 25 |
intestinal epithelial cell | 2.47e-12 | 9 |
epithelial cell of alimentary canal | 2.47e-12 | 9 |
defensive cell | 8.76e-10 | 7 |
endo-epithelial cell | 1.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.01e-21 | 15 |
gut-associated lymphoid tissue | 1.23e-14 | 2 |
mucosa-associated lymphoid tissue | 1.23e-14 | 2 |
lymphoid tissue | 1.23e-14 | 2 |
organ component layer | 2.03e-13 | 24 |
intestinal mucosa | 4.55e-13 | 13 |
wall of intestine | 4.55e-13 | 13 |
gastrointestinal system mucosa | 4.55e-13 | 13 |
epithelium of mucosa | 2.47e-12 | 9 |
gastrointestinal system epithelium | 2.47e-12 | 9 |
intestinal epithelium | 2.47e-12 | 9 |
simple columnar epithelium | 3.86e-10 | 11 |
intestine | 4.22e-10 | 31 |
lymphoid system | 4.52e-10 | 3 |
egg chamber | 4.80e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.