FFCP PHASE1:Mm9::chr2:37544676..37544679,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1779|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:37544676..37544679,-|id=chr2:37544676..37544679,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.85e-08!333;UBERON:0007811!2.53e-07!86;UBERON:0000922!6.16e-07!328;UBERON:0000153!8.19e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.02e-07,64;UBERON:0003075,4.02e-07,64;UBERON:0007284,4.02e-07,64;UBERON:0003056,5.08e-07,49;UBERON:0002021,6.39e-07,10;UBERON:0000411,6.39e-07,10;UBERON:0001950,6.39e-07,10|phase1_expression=0.80074423552397,0,0,0.60492842261366,0,0.503637815735669,0,0.258246646883153,0.140788722151667,0.468129052643987,0.513653904676515,0.797721589953364,0.171200729931206,0.524522414513984,0,1.41732687172878,0,2.83915948822414,1.7824876368746,1.69755860719212,4.08207792725135,0.397163804803541,1.04479915655574,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,0.838913030288682,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.630974884054146,0.571301968807607,0.662605622854841,0.489963196859816,0.383381884072945,1.83843757322004,2.20231761998777,0.893811366596314,1.84327839907492,0.659431438650969,0.457438218012048,0.52091337055676,0.279182999001381,2.8138130501584,1.5279824777681,2.06240009831567,0.854230084794618,1.1183966749518,0.227178579999552,0.151143120213571,1.44932244350839,0,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,0.702222100658759,0.170430322578058,0,0,0.563373679106722,0,0,0,0.216491041011214,0.506719730950197,0,1.02765491747154,0.517875767294343,1.03909497345377,2.08182392119363,1.21786191324856,0.461230994512117,1.05505848386836,0.940709657085638,0.251333182659351,1.48316980640624,0.433798070759735,0.884610551949874,1.13236794963186,0.662524555381181,2.42437626567611,0,4.39171195517321,3.77004072264219,1.27728527604296,0.718890747035522,0,0.508280908292259,1.79748767285787,2.28750301409313,1.88481528169297,4.17178368461463,1.79000820131231,1.66230435647648,2.59586020908412,0.203678727700633,1.36847667671102,0.758168275301024,2.73574412652416,1.04096354370163,1.14951052216736,0.720248519221397,2.56198190320716,3.26575195926374,4.35586648968489,3.18585863503078,3.88055056108524,0.646703978798527,0.945530400839096,1.05570674498369,0.657587197282725,1.66828349535359,1.39300866608867,0.823128545631774,2.58744546864041,0.702213187313235,0,0.852490498186778,0.828503090142008,1.64168241986767,1.08037236876609,1.89395788468168,0.983821158737019,2.1597395804233,2.79040733700489,2.14618721119695,1.05088808130453,1.48103864922132,0.820837320395476,0.648550476366846,1.02339991197733,0.878200461164203,1.07365135008297,1.47202963994889,1.3377599609307,2.64335026387038,1.05780226665418,1.2797295032114,2.55460339046482,1.15980715189884,1.21010114774006,1.77902435075896,0.760902504450237,0.949058123089023,0.494096864172033,2.01068167040216,0.596869416123452,0.974820435595601,1.79763881730844,2.59365659849633,2.19055400579804,0,1.37098215131675,1.1270773567308,1.83286195060783,1.74557238450863,2.52488951605147,1.64414996523069,1.47610147979602,2.511979645462,0.863780147452604,0.889357881261447,0.83422552858047,0.393117990226406,0.674586337154561,1.01430060694251,0.72353147925725,1.2731292589071,0.575392274901621,2.43202840162553,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,1.51547326768267,1.61457672169721,1.92977408545347,2.03228509183265,0.189491411770485,0.488894929326078,1.86719594352707,2.11221223459652,1.50755631697634,1.6663054862021,1.17080188714679,1.89162172927429,1.55025282754142,0.956728611944923,2.29408640602033,2.07221978239075,1.73578870297814,0,0,0.491764273019036,1.10374698521893,1.44495530989013,1.99259867206745,0,0.504941854408746,0.94652465824877,2.73307121007647,1.07711698866399,0.955875191810208,1.55959071857676,0.566153061577665,1.21443210502468,2.92255857911312,0.790575555893047,3.85585579706168,1.41940085208269,0.178065603667255,0.81443479676788,1.31976098378028,0,1.21390318077491,0,1.69744571780308,0.295301892880773,0.614870295887855,1.03371317267288,2.54473610634254,2.13898427030833,0.632073515871632,0,1.03135543248187,4.42571487479924,1.44048875225048,0.258717367565509,2.35770738534752,0.886701168211368,2.67553226403106,2.13913726782757,0,0.469343416127421,0.21183207086382,0.220528398054962,0.32977250588296,1.13025098687134,1.38719727334758,0.954978752025092,0.328281799490123,1.1659233465194,2.78137953015765,0.854354403989263,0.412773735926445,1.48155621895769,1.50694765603753,2.05041341581538,1.60144721244566,0.679913719975421,0.839708713941948,0.414599921413271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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1779 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:37544676..37544679,- | |||
|id=chr2:37544676..37544679,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.85e-08!333;UBERON:0007811!2.53e-07!86;UBERON:0000922!6.16e-07!328;UBERON:0000153!8.19e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.02e-07,64;UBERON:0003075,4.02e-07,64;UBERON:0007284,4.02e-07,64;UBERON:0003056,5.08e-07,49;UBERON:0002021,6.39e-07,10;UBERON:0000411,6.39e-07,10;UBERON:0001950,6.39e-07,10 | |||
|phase1_expression=0.80074423552397,0,0,0.60492842261366,0,0.503637815735669,0,0.258246646883153,0.140788722151667,0.468129052643987,0.513653904676515,0.797721589953364,0.171200729931206,0.524522414513984,0,1.41732687172878,0,2.83915948822414,1.7824876368746,1.69755860719212,4.08207792725135,0.397163804803541,1.04479915655574,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,0.838913030288682,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.630974884054146,0.571301968807607,0.662605622854841,0.489963196859816,0.383381884072945,1.83843757322004,2.20231761998777,0.893811366596314,1.84327839907492,0.659431438650969,0.457438218012048,0.52091337055676,0.279182999001381,2.8138130501584,1.5279824777681,2.06240009831567,0.854230084794618,1.1183966749518,0.227178579999552,0.151143120213571,1.44932244350839,0,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,0.702222100658759,0.170430322578058,0,0,0.563373679106722,0,0,0,0.216491041011214,0.506719730950197,0,1.02765491747154,0.517875767294343,1.03909497345377,2.08182392119363,1.21786191324856,0.461230994512117,1.05505848386836,0.940709657085638,0.251333182659351,1.48316980640624,0.433798070759735,0.884610551949874,1.13236794963186,0.662524555381181,2.42437626567611,0,4.39171195517321,3.77004072264219,1.27728527604296,0.718890747035522,0,0.508280908292259,1.79748767285787,2.28750301409313,1.88481528169297,4.17178368461463,1.79000820131231,1.66230435647648,2.59586020908412,0.203678727700633,1.36847667671102,0.758168275301024,2.73574412652416,1.04096354370163,1.14951052216736,0.720248519221397,2.56198190320716,3.26575195926374,4.35586648968489,3.18585863503078,3.88055056108524,0.646703978798527,0.945530400839096,1.05570674498369,0.657587197282725,1.66828349535359,1.39300866608867,0.823128545631774,2.58744546864041,0.702213187313235,0,0.852490498186778,0.828503090142008,1.64168241986767,1.08037236876609,1.89395788468168,0.983821158737019,2.1597395804233,2.79040733700489,2.14618721119695,1.05088808130453,1.48103864922132,0.820837320395476,0.648550476366846,1.02339991197733,0.878200461164203,1.07365135008297,1.47202963994889,1.3377599609307,2.64335026387038,1.05780226665418,1.2797295032114,2.55460339046482,1.15980715189884,1.21010114774006,1.77902435075896,0.760902504450237,0.949058123089023,0.494096864172033,2.01068167040216,0.596869416123452,0.974820435595601,1.79763881730844,2.59365659849633,2.19055400579804,0,1.37098215131675,1.1270773567308,1.83286195060783,1.74557238450863,2.52488951605147,1.64414996523069,1.47610147979602,2.511979645462,0.863780147452604,0.889357881261447,0.83422552858047,0.393117990226406,0.674586337154561,1.01430060694251,0.72353147925725,1.2731292589071,0.575392274901621,2.43202840162553,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,1.51547326768267,1.61457672169721,1.92977408545347,2.03228509183265,0.189491411770485,0.488894929326078,1.86719594352707,2.11221223459652,1.50755631697634,1.6663054862021,1.17080188714679,1.89162172927429,1.55025282754142,0.956728611944923,2.29408640602033,2.07221978239075,1.73578870297814,0,0,0.491764273019036,1.10374698521893,1.44495530989013,1.99259867206745,0,0.504941854408746,0.94652465824877,2.73307121007647,1.07711698866399,0.955875191810208,1.55959071857676,0.566153061577665,1.21443210502468,2.92255857911312,0.790575555893047,3.85585579706168,1.41940085208269,0.178065603667255,0.81443479676788,1.31976098378028,0,1.21390318077491,0,1.69744571780308,0.295301892880773,0.614870295887855,1.03371317267288,2.54473610634254,2.13898427030833,0.632073515871632,0,1.03135543248187,4.42571487479924,1.44048875225048,0.258717367565509,2.35770738534752,0.886701168211368,2.67553226403106,2.13913726782757,0,0.469343416127421,0.21183207086382,0.220528398054962,0.32977250588296,1.13025098687134,1.38719727334758,0.954978752025092,0.328281799490123,1.1659233465194,2.78137953015765,0.854354403989263,0.412773735926445,1.48155621895769,1.50694765603753,2.05041341581538,1.60144721244566,0.679913719975421,0.839708713941948,0.414599921413271,1.90934123603023,0.474503990371703,1.01659733563424,1.40406943068342,0.836353184057875,1.09181281873089,2.02296519577231,1.90102948168273,0.785267825952089,2.07383957266869,1.86401793926078,5.6369293868419,0.598066184175915,0.66183396182839,1.16670713006429,0.645799117388655,0.506868376472335,1.5256441023948,1.17183946359555,2.30690557736564,12.3207901621263,11.5212002503146,3.47612232690996,0.405450430580328,1.33524244314275,1.16928740680016,2.32734704367726,3.3775830312815,4.92801343031872,5.46451250545936,4.54349024766664,4.03896075271499,4.94048307170519,2.72882066071307,4.71438024037614,5.02570679380746,0.453460767230423,0.443971906748129,0.7177108528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| |||
|short_description=p@chr2:37544676..37544679,- | |||
}} | |||
Revision as of 23:58, 13 September 2013
| Short description: | p@chr2:37544676..37544679, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr2:37544676..37544679, - |
| Coexpression cluster: | MCL_coexpression_mm9:1779 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 4.02e-07 | 64 |
| neural plate | 4.02e-07 | 64 |
| presumptive neural plate | 4.02e-07 | 64 |
| pre-chordal neural plate | 5.08e-07 | 49 |
| occipital lobe | 6.39e-07 | 10 |
| visual cortex | 6.39e-07 | 10 |
| neocortex | 6.39e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
