FFCP PHASE1:Mm9::chr3:132477952..132477963,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=96|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:132477952..132477963,+|id=chr3:132477952..132477963,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.29e-09!22;UBERON:0007499!2.29e-09!22;UBERON:0006925!2.29e-09!22;UBERON:0009497!2.29e-09!22;UBERON:0000015!2.29e-09!22;UBERON:0002423!2.29e-09!22;UBERON:0006235!2.29e-09!22;UBERON:0008835!2.29e-09!22;UBERON:0003894!2.29e-09!22;UBERON:0004161!2.29e-09!22;UBERON:0008836!2.29e-09!22;UBERON:0009854!7.31e-09!23;UBERON:0009856!7.31e-09!23;UBERON:0005172!1.03e-08!49;UBERON:0005173!1.03e-08!49;UBERON:0002417!1.03e-08!49;UBERON:0000916!1.03e-08!49;UBERON:0002365!5.60e-08!25;UBERON:0002330!5.60e-08!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-20,22;UBERON:0007499,1.08e-20,22;UBERON:0006925,1.08e-20,22;UBERON:0009497,1.08e-20,22;UBERON:0000015,1.08e-20,22;UBERON:0002423,1.08e-20,22;UBERON:0006235,1.08e-20,22;UBERON:0008835,1.08e-20,22;UBERON:0003894,1.08e-20,22;UBERON:0004161,1.08e-20,22;UBERON:0008836,1.08e-20,22;UBERON:0009854,8.30e-20,23;UBERON:0009856,8.30e-20,23;UBERON:0002365,3.00e-18,25;UBERON:0002330,3.00e-18,25;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0005256,3.00e-10,45;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0003914,8.06e-10,47;UBERON:0009569,1.86e-09,66;UBERON:0003929,2.06e-08,55;UBERON:0005177,6.48e-08,79;UBERON:0002368,1.01e-07,60;UBERON:0002530,3.91e-07,65;UBERON:0000490,5.00e-07,66;UBERON:0002100,5.94e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0.597423819763102,0,0,0,0,0,0.561086559122548,1.13825766823663,0,0.941992367048249,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,0,2.87536413054709,3.72140947668503,1.24815069245824,1.01031551178845,3.40855085691633,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0.463735671240843|short_description=p@chr3:132477952..132477963,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=96 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:132477952..132477963,+ | |||
|id=chr3:132477952..132477963,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.29e-09!22;UBERON:0007499!2.29e-09!22;UBERON:0006925!2.29e-09!22;UBERON:0009497!2.29e-09!22;UBERON:0000015!2.29e-09!22;UBERON:0002423!2.29e-09!22;UBERON:0006235!2.29e-09!22;UBERON:0008835!2.29e-09!22;UBERON:0003894!2.29e-09!22;UBERON:0004161!2.29e-09!22;UBERON:0008836!2.29e-09!22;UBERON:0009854!7.31e-09!23;UBERON:0009856!7.31e-09!23;UBERON:0005172!1.03e-08!49;UBERON:0005173!1.03e-08!49;UBERON:0002417!1.03e-08!49;UBERON:0000916!1.03e-08!49;UBERON:0002365!5.60e-08!25;UBERON:0002330!5.60e-08!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-20,22;UBERON:0007499,1.08e-20,22;UBERON:0006925,1.08e-20,22;UBERON:0009497,1.08e-20,22;UBERON:0000015,1.08e-20,22;UBERON:0002423,1.08e-20,22;UBERON:0006235,1.08e-20,22;UBERON:0008835,1.08e-20,22;UBERON:0003894,1.08e-20,22;UBERON:0004161,1.08e-20,22;UBERON:0008836,1.08e-20,22;UBERON:0009854,8.30e-20,23;UBERON:0009856,8.30e-20,23;UBERON:0002365,3.00e-18,25;UBERON:0002330,3.00e-18,25;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0005256,3.00e-10,45;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0003914,8.06e-10,47;UBERON:0009569,1.86e-09,66;UBERON:0003929,2.06e-08,55;UBERON:0005177,6.48e-08,79;UBERON:0002368,1.01e-07,60;UBERON:0002530,3.91e-07,65;UBERON:0000490,5.00e-07,66;UBERON:0002100,5.94e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0.597423819763102,0,0,0,0,0,0.561086559122548,1.13825766823663,0,0.941992367048249,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,0,2.87536413054709,3.72140947668503,1.24815069245824,1.01031551178845,3.40855085691633,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0.463735671240843 | |||
|short_description=p@chr3:132477952..132477963,+ | |||
}} |
Revision as of 01:35, 14 September 2013
Short description: | p@chr3:132477952..132477963, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:132477952..132477963, + |
Coexpression cluster: | MCL_coexpression_mm9:96 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.08e-20 | 22 |
epithelial sac | 1.08e-20 | 22 |
digestive gland | 1.08e-20 | 22 |
epithelium of foregut-midgut junction | 1.08e-20 | 22 |
anatomical boundary | 1.08e-20 | 22 |
hepatobiliary system | 1.08e-20 | 22 |
foregut-midgut junction | 1.08e-20 | 22 |
hepatic diverticulum | 1.08e-20 | 22 |
liver primordium | 1.08e-20 | 22 |
septum transversum | 1.08e-20 | 22 |
liver bud | 1.08e-20 | 22 |
digestive tract diverticulum | 8.30e-20 | 23 |
sac | 8.30e-20 | 23 |
exocrine gland | 3.00e-18 | 25 |
exocrine system | 3.00e-18 | 25 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
trunk mesenchyme | 3.00e-10 | 45 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
epithelial tube | 8.06e-10 | 47 |
subdivision of trunk | 1.86e-09 | 66 |
gut epithelium | 2.06e-08 | 55 |
trunk region element | 6.48e-08 | 79 |
endocrine gland | 1.01e-07 | 60 |
gland | 3.91e-07 | 65 |
unilaminar epithelium | 5.00e-07 | 66 |
trunk | 5.94e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.