FFCP PHASE1:Hg19::chr7:80373842..80373859,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10512|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10725|TSSclassifier=N|UniProt=|association_with_transcript=-322bp_to_D32000_5end|coexpression_cluster_id=C1283|description=CAGE_peak_8_at_SEMA3C_5end|id=chr7:80373842..80373859,-|ontology_enrichment_celltype=CL:0000077!1.07e-07!19|ontology_enrichment_celltype_v019=CL:0000214;5.37e-09;3!CL:0000135;5.59e-09;3!CL:0000388;5.59e-09;3!CL:0002579;1.43e-08;3|ontology_enrichment_celltype_v019_2=CL:0000214,5.29e-09,3;CL:0000135,5.72e-09,3;CL:0000388,5.72e-09,3;CL:0002579,2.08e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!2.47e-08!14|ontology_enrichment_disease_v019=DOID:2394;1.09e-09;14!DOID:6193;2.98e-07;1!DOID:3369;7.55e-07;1|ontology_enrichment_disease_v019_2=DOID:2394,1.30e-09,14;DOID:6193,3.36e-07,1;DOID:3369,5.06e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004457;5.97e-16;9!UBERON:0000042;5.97e-16;9!UBERON:0002118;1.60e-10;5!UBERON:0003688;4.89e-09;6!UBERON:0002358;4.89e-09;6!UBERON:0003684;4.89e-09;6!UBERON:0001178;4.89e-09;6!UBERON:0006915;5.37e-09;3!UBERON:0007616;5.37e-09;3!UBERON:0002217;5.37e-09;3!UBERON:0002018;5.37e-09;3!UBERON:0007846;5.59e-09;3!UBERON:0000043;5.59e-09;3!UBERON:0007845;5.59e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.12e-11,12;UBERON:0000042,1.12e-11,12;UBERON:0002118,1.51e-10,5;UBERON:0006915,5.29e-09,3;UBERON:0007616,5.29e-09,3;UBERON:0002217,5.29e-09,3;UBERON:0002018,5.29e-09,3;UBERON:0007846,5.72e-09,3;UBERON:0000043,5.72e-09,3;UBERON:0007845,5.72e-09,3;UBERON:0003688,9.20e-09,6;UBERON:0002358,9.20e-09,6;UBERON:0003684,9.20e-09,6;UBERON:0001178,9.20e-09,6|phase1_expression=0.54503513781167,0.856402095563933,0.986680828671798,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.44846518960824,0,0.486634870302636,0.0945348171640679,1.10864698731282,0.87834785693126,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,1.72101972449288,0,0,0,0.74000264525148,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,1.25572744982203,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0.201504196455281,0,0.386521706326594,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,1.00789276919316,0.425325291727159,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,2.39935178836937,1.2162378064119,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.306923946576125,0.841980283299221,1.02511319404561,0.511707249066704,2.0911009748669,0,0.462629081407967,0,0,0.519254429183621,0,0,0.802025881213139,0.644566922551274,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0,0,0,1.32227932288782,0,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,1.116475108079,0.949138274156178,0.571890581771475,0,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,1.70599442741899,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,3.79993743535795,8.56166721695745,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-322bp_to_D32000_5end | |||
|coexpression_cluster_id=C1283 | |||
|description=CAGE_peak_8_at_SEMA3C_5end | |||
|id=chr7:80373842..80373859,- | |||
|ontology_enrichment_celltype=CL:0000077!1.07e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000214;5.37e-09;3!CL:0000135;5.59e-09;3!CL:0000388;5.59e-09;3!CL:0002579;1.43e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,5.29e-09,3;CL:0000135,5.72e-09,3;CL:0000388,5.72e-09,3;CL:0002579,2.08e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.47e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.09e-09;14!DOID:6193;2.98e-07;1!DOID:3369;7.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.30e-09,14;DOID:6193,3.36e-07,1;DOID:3369,5.06e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.97e-16;9!UBERON:0000042;5.97e-16;9!UBERON:0002118;1.60e-10;5!UBERON:0003688;4.89e-09;6!UBERON:0002358;4.89e-09;6!UBERON:0003684;4.89e-09;6!UBERON:0001178;4.89e-09;6!UBERON:0006915;5.37e-09;3!UBERON:0007616;5.37e-09;3!UBERON:0002217;5.37e-09;3!UBERON:0002018;5.37e-09;3!UBERON:0007846;5.59e-09;3!UBERON:0000043;5.59e-09;3!UBERON:0007845;5.59e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.12e-11,12;UBERON:0000042,1.12e-11,12;UBERON:0002118,1.51e-10,5;UBERON:0006915,5.29e-09,3;UBERON:0007616,5.29e-09,3;UBERON:0002217,5.29e-09,3;UBERON:0002018,5.29e-09,3;UBERON:0007846,5.72e-09,3;UBERON:0000043,5.72e-09,3;UBERON:0007845,5.72e-09,3;UBERON:0003688,9.20e-09,6;UBERON:0002358,9.20e-09,6;UBERON:0003684,9.20e-09,6;UBERON:0001178,9.20e-09,6 | |||
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| |||
|short_description=p8@SEMA3C | |||
}} |
Revision as of 02:09, 14 September 2013
Short description: | p8@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SEMA3C_5end |
Coexpression cluster: | C1283_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Ewing_Chondrocyte_Neurons |
Association with transcript: | -322bp_to_D32000_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 5.29e-09 | 3 |
fibrocyte | 5.72e-09 | 3 |
tendon cell | 5.72e-09 | 3 |
omentum preadipocyte | 2.08e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.12e-11 | 12 |
serous membrane | 1.12e-11 | 12 |
right ovary | 1.51e-10 | 5 |
stratified squamous epithelium | 5.29e-09 | 3 |
layer of synovial tissue | 5.29e-09 | 3 |
synovial joint | 5.29e-09 | 3 |
synovial membrane of synovial joint | 5.29e-09 | 3 |
dense regular connective tissue | 5.72e-09 | 3 |
tendon | 5.72e-09 | 3 |
regular connective tissue | 5.72e-09 | 3 |
omentum | 9.20e-09 | 6 |
peritoneum | 9.20e-09 | 6 |
abdominal cavity | 9.20e-09 | 6 |
visceral peritoneum | 9.20e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.30e-09 | 14 |
epithelioid sarcoma | 3.36e-07 | 1 |
peripheral primitive neuroectodermal tumor | 5.06e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.