FFCP PHASE1:Hg19::chr8:134582537..134582547,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6482|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10862|TSSclassifier=S|UniProt=|association_with_transcript=74bp_to_ENST00000519435_5end|coexpression_cluster_id=C6|description=CAGE_peak_18_at_ST3GAL1_5end|id=chr8:134582537..134582547,-|ontology_enrichment_celltype=CL:0002057!3.31e-32!42;CL:0000860!2.73e-29!45;CL:0000766!1.20e-25!76;CL:0000839!2.45e-19!70;CL:0000557!6.63e-19!71;CL:0002194!9.97e-19!63;CL:0000576!9.97e-19!63;CL:0000040!9.97e-19!63;CL:0000559!9.97e-19!63;CL:0002009!7.90e-18!65;CL:0000738!1.60e-16!140;CL:0000763!1.02e-15!112;CL:0000049!1.02e-15!112;CL:0002393!1.65e-14!9;CL:0002397!1.65e-14!9;CL:0000037!7.18e-12!172;CL:0000566!7.18e-12!172;CL:0002087!2.09e-11!119;CL:0000988!5.82e-11!182;CL:0002031!3.99e-10!124;CL:0002032!5.17e-10!165;CL:0000837!5.17e-10!165;CL:0000094!1.90e-07!8;CL:0000134!6.50e-07!358|ontology_enrichment_celltype_v019=CL:0002393;4.86e-21;6!CL:0002397;4.86e-21;6!CL:0000226;1.19e-18;3!CL:0000767;1.19e-18;3!CL:0000842;1.19e-18;3!CL:0000094;1.24e-15;8!CL:0000081;1.55e-11;11!CL:0000766;1.50e-10;69!CL:0000576;8.61e-09;48!CL:0000771;4.37e-08;2|ontology_enrichment_celltype_v019_2=CL:0000767,1.14e-18,3;CL:0000226,1.48e-18,3;CL:0000842,1.48e-18,3;CL:0000766,3.38e-17,72;CL:0000094,1.21e-15,8;CL:0000860,4.34e-15,42;CL:0002057,4.34e-15,42;CL:0002393,3.03e-14,9;CL:0002397,3.03e-14,9;CL:0000473,3.87e-13,48;CL:0000234,3.87e-13,48;CL:0000738,1.20e-12,136;CL:0000081,1.52e-11,11;CL:0000763,3.80e-11,108;CL:0000049,3.80e-11,108;CL:0002194,2.12e-10,59;CL:0000576,2.12e-10,59;CL:0000040,2.12e-10,59;CL:0000559,2.12e-10,59;CL:0002009,4.78e-10,61;CL:0000037,5.62e-10,168;CL:0000988,2.13e-09,177;CL:0000839,2.97e-09,66;CL:0000557,4.14e-09,67;CL:0002087,2.36e-08,115;CL:0000771,4.38e-08,2;CL:0002032,4.18e-07,161;CL:0000837,4.18e-07,161|ontology_enrichment_development_v019=CL:0002057;6.76e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.61e-15!80;UBERON:0002390!3.24e-14!102;UBERON:0003061!3.24e-14!102;UBERON:0001474!1.12e-13!86;UBERON:0002193!1.42e-12!112;UBERON:0004765!1.60e-12!101;UBERON:0001434!1.60e-12!101;UBERON:0002405!6.95e-11!115;UBERON:0002204!2.35e-09!167;UBERON:0003081!2.98e-09!216;UBERON:0000926!7.51e-08!448;UBERON:0004120!7.51e-08!448;UBERON:0006603!7.51e-08!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.82e-10,98;UBERON:0003061,5.82e-10,98;UBERON:0002193,5.91e-09,108;UBERON:0002371,5.64e-08,76;UBERON:0001474,2.35e-07,82|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,0.383829398097213,2.16742572642506,0,0,0,0,0,0,11.6339035791694,9.02450013615638,7.59538047505481,0.447830948479849,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0,1.72372840368309,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,0.224723484445085,0.918251677112708,0.962787081228281,0,0.329851300186716,0.199463657621632,0,1.7412554317715,0,1.86846674698672,0,0.521482918420201,0,0,0.736555271975129,0.316462387440884,0.845021145247767,0.850417199860174,0.838634582033504,0.673971786878971,0.450530678524519,0.64290234678832,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=74bp_to_ENST00000519435_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_18_at_ST3GAL1_5end | |||
|id=chr8:134582537..134582547,- | |||
|ontology_enrichment_celltype=CL:0002057!3.31e-32!42;CL:0000860!2.73e-29!45;CL:0000766!1.20e-25!76;CL:0000839!2.45e-19!70;CL:0000557!6.63e-19!71;CL:0002194!9.97e-19!63;CL:0000576!9.97e-19!63;CL:0000040!9.97e-19!63;CL:0000559!9.97e-19!63;CL:0002009!7.90e-18!65;CL:0000738!1.60e-16!140;CL:0000763!1.02e-15!112;CL:0000049!1.02e-15!112;CL:0002393!1.65e-14!9;CL:0002397!1.65e-14!9;CL:0000037!7.18e-12!172;CL:0000566!7.18e-12!172;CL:0002087!2.09e-11!119;CL:0000988!5.82e-11!182;CL:0002031!3.99e-10!124;CL:0002032!5.17e-10!165;CL:0000837!5.17e-10!165;CL:0000094!1.90e-07!8;CL:0000134!6.50e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.86e-21;6!CL:0002397;4.86e-21;6!CL:0000226;1.19e-18;3!CL:0000767;1.19e-18;3!CL:0000842;1.19e-18;3!CL:0000094;1.24e-15;8!CL:0000081;1.55e-11;11!CL:0000766;1.50e-10;69!CL:0000576;8.61e-09;48!CL:0000771;4.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.14e-18,3;CL:0000226,1.48e-18,3;CL:0000842,1.48e-18,3;CL:0000766,3.38e-17,72;CL:0000094,1.21e-15,8;CL:0000860,4.34e-15,42;CL:0002057,4.34e-15,42;CL:0002393,3.03e-14,9;CL:0002397,3.03e-14,9;CL:0000473,3.87e-13,48;CL:0000234,3.87e-13,48;CL:0000738,1.20e-12,136;CL:0000081,1.52e-11,11;CL:0000763,3.80e-11,108;CL:0000049,3.80e-11,108;CL:0002194,2.12e-10,59;CL:0000576,2.12e-10,59;CL:0000040,2.12e-10,59;CL:0000559,2.12e-10,59;CL:0002009,4.78e-10,61;CL:0000037,5.62e-10,168;CL:0000988,2.13e-09,177;CL:0000839,2.97e-09,66;CL:0000557,4.14e-09,67;CL:0002087,2.36e-08,115;CL:0000771,4.38e-08,2;CL:0002032,4.18e-07,161;CL:0000837,4.18e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;6.76e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.61e-15!80;UBERON:0002390!3.24e-14!102;UBERON:0003061!3.24e-14!102;UBERON:0001474!1.12e-13!86;UBERON:0002193!1.42e-12!112;UBERON:0004765!1.60e-12!101;UBERON:0001434!1.60e-12!101;UBERON:0002405!6.95e-11!115;UBERON:0002204!2.35e-09!167;UBERON:0003081!2.98e-09!216;UBERON:0000926!7.51e-08!448;UBERON:0004120!7.51e-08!448;UBERON:0006603!7.51e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.82e-10,98;UBERON:0003061,5.82e-10,98;UBERON:0002193,5.91e-09,108;UBERON:0002371,5.64e-08,76;UBERON:0001474,2.35e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,0.383829398097213,2.16742572642506,0,0,0,0,0,0,11.6339035791694,9.02450013615638,7.59538047505481,0.447830948479849,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0,1.72372840368309,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,0.224723484445085,0.918251677112708,0.962787081228281,0,0.329851300186716,0.199463657621632,0,1.7412554317715,0,1.86846674698672,0,0.521482918420201,0,0,0.736555271975129,0.316462387440884,0.845021145247767,0.850417199860174,0.838634582033504,0.673971786878971,0.450530678524519,0.64290234678832,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.288109595976299,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0.429642228169954,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0.118193840883968,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@ST3GAL1 | |||
}} |
Revision as of 03:52, 14 September 2013
Short description: | p18@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_ST3GAL1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 74bp_to_ENST00000519435_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.14e-18 | 3 |
single nucleate cell | 1.48e-18 | 3 |
mononuclear cell | 1.48e-18 | 3 |
myeloid leukocyte | 3.38e-17 | 72 |
granulocyte | 1.21e-15 | 8 |
classical monocyte | 4.34e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.34e-15 | 42 |
intermediate monocyte | 3.03e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.03e-14 | 9 |
defensive cell | 3.87e-13 | 48 |
phagocyte | 3.87e-13 | 48 |
leukocyte | 1.20e-12 | 136 |
blood cell | 1.52e-11 | 11 |
myeloid cell | 3.80e-11 | 108 |
common myeloid progenitor | 3.80e-11 | 108 |
monopoietic cell | 2.12e-10 | 59 |
monocyte | 2.12e-10 | 59 |
monoblast | 2.12e-10 | 59 |
promonocyte | 2.12e-10 | 59 |
macrophage dendritic cell progenitor | 4.78e-10 | 61 |
hematopoietic stem cell | 5.62e-10 | 168 |
hematopoietic cell | 2.13e-09 | 177 |
myeloid lineage restricted progenitor cell | 2.97e-09 | 66 |
granulocyte monocyte progenitor cell | 4.14e-09 | 67 |
nongranular leukocyte | 2.36e-08 | 115 |
eosinophil | 4.38e-08 | 2 |
hematopoietic oligopotent progenitor cell | 4.18e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.18e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.82e-10 | 98 |
blood island | 5.82e-10 | 98 |
hemolymphoid system | 5.91e-09 | 108 |
bone marrow | 5.64e-08 | 76 |
bone element | 2.35e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.