FFCP PHASE1:Mm9::chr4:132908802..132908812,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230796|HGNC=|MCL_coexpression_id=97|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000135929_5end|description=CAGE_peak_14_at_Wdtc1_5end|id=chr4:132908802..132908812,-|ontology_enrichment_celltype=CL:0000349!1.15e-12!3;CL:0000351!1.15e-12!3|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!3.19e-16!24;UBERON:0000473!4.06e-15!14;UBERON:0005156!7.95e-15!26;UBERON:0000990!7.95e-15!26;UBERON:0000991!1.60e-14!18;UBERON:0005564!1.60e-14!18;UBERON:0003135!4.90e-14!15;UBERON:0003101!4.34e-13!16;UBERON:0000079!4.34e-13!16;UBERON:0000358!1.15e-12!3;UBERON:0000307!1.15e-12!3;UBERON:0004176!2.97e-12!17;UBERON:0009196!2.97e-12!17;UBERON:0009117!2.97e-12!17;UBERON:0001987!9.05e-09!2;UBERON:0003124!9.05e-09!2;UBERON:0004340!9.05e-09!2|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,6.19e-10,2;UBERON:0003124,6.19e-10,2;UBERON:0004340,6.19e-10,2;UBERON:0005631,4.77e-07,3;UBERON:0000478,4.77e-07,3;UBERON:0000158,4.77e-07,3|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0.516639293910924,0,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,2.69141569828427,2.85403847818933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p14@Wdtc1}} | ||
|EntrezGene=230796 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000135929_5end | |||
|description=CAGE_peak_14_at_Wdtc1_5end | |||
|id=chr4:132908802..132908812,- | |||
|ontology_enrichment_celltype=CL:0000349!1.15e-12!3;CL:0000351!1.15e-12!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!3.19e-16!24;UBERON:0000473!4.06e-15!14;UBERON:0005156!7.95e-15!26;UBERON:0000990!7.95e-15!26;UBERON:0000991!1.60e-14!18;UBERON:0005564!1.60e-14!18;UBERON:0003135!4.90e-14!15;UBERON:0003101!4.34e-13!16;UBERON:0000079!4.34e-13!16;UBERON:0000358!1.15e-12!3;UBERON:0000307!1.15e-12!3;UBERON:0004176!2.97e-12!17;UBERON:0009196!2.97e-12!17;UBERON:0009117!2.97e-12!17;UBERON:0001987!9.05e-09!2;UBERON:0003124!9.05e-09!2;UBERON:0004340!9.05e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,6.19e-10,2;UBERON:0003124,6.19e-10,2;UBERON:0004340,6.19e-10,2;UBERON:0005631,4.77e-07,3;UBERON:0000478,4.77e-07,3;UBERON:0000158,4.77e-07,3 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.27099242518292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0.516639293910924,0,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,2.69141569828427,2.85403847818933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@Wdtc1 | |||
}} |
Revision as of 04:00, 14 September 2013
Short description: | p14@Wdtc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Wdtc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -9bp_to_ENSMUST00000135929_5end |
EntrezGene: | Wdtc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.90e-53 | 3 |
trophoblast cell | 4.90e-53 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.90e-53 | 3 |
blastula | 4.90e-53 | 3 |
cleaving embryo | 4.90e-53 | 3 |
placenta | 6.19e-10 | 2 |
chorion | 6.19e-10 | 2 |
allantois | 6.19e-10 | 2 |
extraembryonic membrane | 4.77e-07 | 3 |
extraembryonic structure | 4.77e-07 | 3 |
membranous layer | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.