FFCP PHASE1:Hg19::chr8:32579321..32579340,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3084|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7997|TSSclassifier=S|UniProt=E5RHP6|association_with_transcript=0bp_to_ENST00000522402_5end|coexpression_cluster_id=C125|description=CAGE_peak_10_at_NRG1_5end|id=chr8:32579321..32579340,+|ontology_enrichment_celltype=CL:0000055!5.33e-19!180;CL:0000057!1.16e-17!75;CL:0002334!5.88e-11!12;CL:0002620!1.49e-09!23;CL:1000306!8.64e-08!4;CL:0002547!8.64e-08!4;CL:0000359!4.61e-07!32;CL:0002580!9.97e-07!3|ontology_enrichment_celltype_v019=CL:0002620;1.43e-12;23!CL:0000319;4.27e-08;1!CL:0000228;1.04e-07;1!CL:0002372;1.04e-07;1|ontology_enrichment_celltype_v019_2=CL:0002620,1.65e-12,23;CL:0000319,4.28e-08,1;CL:0000057,5.48e-08,76;CL:0000228,8.28e-08,1;CL:0002372,8.28e-08,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060084!6.79e-07!3;DOID:127!6.79e-07!3|ontology_enrichment_disease_v019=DOID:0060084;2.99e-09;3!DOID:127;2.99e-09;3!DOID:3030;4.27e-08;1!DOID:6193;2.10e-07;1!DOID:0060072;3.83e-07;4|ontology_enrichment_disease_v019_2=DOID:0060084,2.33e-09,3;DOID:127,2.33e-09,3;DOID:3030,4.28e-08,1;DOID:6193,1.48e-07,1;DOID:0060072,3.18e-07,4|ontology_enrichment_uberon=UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0004573!6.37e-08!33;UBERON:0004571!6.37e-08!33;UBERON:0003076!7.65e-08!15;UBERON:0003057!7.65e-08!15;UBERON:0000415!8.64e-08!4;UBERON:0007240!8.64e-08!4;UBERON:0005742!8.64e-08!4;UBERON:0005734!8.64e-08!4;UBERON:0004664!8.64e-08!4;UBERON:0004663!8.64e-08!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,1.31693286264251,0.30648779579902,0,0,1.61450672119976,0,0,1.20036438433761,0.206105058476878,1.03056216018252,0.558350568994769,5.90717162844432,3.21542117031955,0.252433774244115,0.0920498986422993,0,2.13005755509969,2.31729825923573,0.847802961552438,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.496215615637554,3.37616341233737,0.561320188866147,0.256278298511402,2.04682899626681,0,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,2.32422774648643,8.18512101759664,2.0911118104818,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,1.99031692572366,0,0,0,0.405820753925408,0.30982349809975,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0,13.3543988999014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,1.20238230377301,0,0,0,0.916292769327325,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,2.5926644736038,1.63293680054705,0,0,3.23737241392301,0,0,0,0.387848869084652,0.26446520348538,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.796191777397232,0,0.343395705182793,1.01024846629776,0,0.192619830407303,0,0,1.81364740409818,0,0,4.65630986811867,0,0,4.41722864864703,1.15748422962549,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,83.8085618850183,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,5.33934933654034,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611727596791485,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.11833200073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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |||
|TSSclassifier=S | |||
|UniProt=E5RHP6 | |||
|association_with_transcript=0bp_to_ENST00000522402_5end | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_10_at_NRG1_5end | |||
|id=chr8:32579321..32579340,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.33e-19!180;CL:0000057!1.16e-17!75;CL:0002334!5.88e-11!12;CL:0002620!1.49e-09!23;CL:1000306!8.64e-08!4;CL:0002547!8.64e-08!4;CL:0000359!4.61e-07!32;CL:0002580!9.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.43e-12;23!CL:0000319;4.27e-08;1!CL:0000228;1.04e-07;1!CL:0002372;1.04e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.65e-12,23;CL:0000319,4.28e-08,1;CL:0000057,5.48e-08,76;CL:0000228,8.28e-08,1;CL:0002372,8.28e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!6.79e-07!3;DOID:127!6.79e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.99e-09;3!DOID:127;2.99e-09;3!DOID:3030;4.27e-08;1!DOID:6193;2.10e-07;1!DOID:0060072;3.83e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.33e-09,3;DOID:127,2.33e-09,3;DOID:3030,4.28e-08,1;DOID:6193,1.48e-07,1;DOID:0060072,3.18e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0004573!6.37e-08!33;UBERON:0004571!6.37e-08!33;UBERON:0003076!7.65e-08!15;UBERON:0003057!7.65e-08!15;UBERON:0000415!8.64e-08!4;UBERON:0007240!8.64e-08!4;UBERON:0005742!8.64e-08!4;UBERON:0005734!8.64e-08!4;UBERON:0004664!8.64e-08!4;UBERON:0004663!8.64e-08!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,1.31693286264251,0.30648779579902,0,0,1.61450672119976,0,0,1.20036438433761,0.206105058476878,1.03056216018252,0.558350568994769,5.90717162844432,3.21542117031955,0.252433774244115,0.0920498986422993,0,2.13005755509969,2.31729825923573,0.847802961552438,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.496215615637554,3.37616341233737,0.561320188866147,0.256278298511402,2.04682899626681,0,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,2.32422774648643,8.18512101759664,2.0911118104818,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,1.99031692572366,0,0,0,0.405820753925408,0.30982349809975,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0,13.3543988999014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,1.20238230377301,0,0,0,0.916292769327325,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,2.5926644736038,1.63293680054705,0,0,3.23737241392301,0,0,0,0.387848869084652,0.26446520348538,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.796191777397232,0,0.343395705182793,1.01024846629776,0,0.192619830407303,0,0,1.81364740409818,0,0,4.65630986811867,0,0,4.41722864864703,1.15748422962549,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,83.8085618850183,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,5.33934933654034,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611727596791485,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.511280428554946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@NRG1 | |||
}} |
Revision as of 05:07, 14 September 2013
Short description: | p10@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_NRG1_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 0bp_to_ENST00000522402_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | E5RHP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.65e-12 | 23 |
mucus secreting cell | 4.28e-08 | 1 |
fibroblast | 5.48e-08 | 76 |
multinucleate cell | 8.28e-08 | 1 |
myotube | 8.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.33e-09 | 3 |
leiomyoma | 2.33e-09 | 3 |
mucinous adenocarcinoma | 4.28e-08 | 1 |
epithelioid sarcoma | 1.48e-07 | 1 |
benign neoplasm | 3.18e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.