FFCP PHASE1:Mm9::chr4:84851055..84851096,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20404|HGNC=|UniProt=A2ALV3|association_with_transcript=25bp_to_ENSMUST00000107188_5end|description=CAGE_peak_2_at_Sh3gl2_5end|id=chr4:84851055..84851096,+|ontology_enrichment_celltype=CL:0002563!2.20e-07!9;CL:0002251!2.20e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.29e-10,9;CL:0002251,2.29e-10,9;CL:0000239,3.99e-08,6;CL:0000677,3.99e-08,6;CL:0000584,3.99e-08,6;CL:0000075,9.77e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.16e-11!43;UBERON:0000344!2.88e-11!15;UBERON:0005409!5.70e-11!59;UBERON:0001242!4.28e-10!13;UBERON:0000060!4.28e-10!13;UBERON:0001262!4.28e-10!13;UBERON:0004786!4.28e-10!13;UBERON:0003350!2.20e-07!9;UBERON:0004808!2.20e-07!9;UBERON:0001277!2.20e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.39e-27,31;UBERON:0005409,6.66e-22,47;UBERON:0000344,3.17e-16,15;UBERON:0001242,1.87e-14,13;UBERON:0001262,1.87e-14,13;UBERON:0004786,1.87e-14,13;UBERON:0003350,2.29e-10,9;UBERON:0004808,2.29e-10,9;UBERON:0001277,2.29e-10,9;UBERON:0004923,3.64e-08,24;UBERON:0000485,5.68e-08,11|phase1_expression=0.160148847104794,28.964958834067,21.3849642513082,37.5055622020469,40.0716583957078,11.5836697619204,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,5.91971964335605,6.65286915094793,19.5238867799107,11.630573896295,12.4973314957816,12.5415456841207,12.8535366177565,4.21287970245079,0,0,0,4.33277429626912,3.65716219788683,5.3084032628216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,1.10434270475807,0.244981598429908,0,0,2.20231761998777,2.68143409978894,2.15049146558741,0.263772575460388,0.457438218012048,0.52091337055676,3.35019598801657,1.68828783009504,2.13917546887534,1.76777151284201,1.42371680799103,1.1183966749518,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0.506719730950197,1.01104889002957,3.19714863213368,0,1.33597925158342,0,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0,0,0,0,0,0,7.45567044872489,12.296793474485,8.79676168616511,10.2182822083437,0,0,0,4.19413790333504,0.457500602818626,0.376963056338593,1.39059456153821,1.27857728665165,2.70124457927428,1.94689515681309,0.407357455401265,1.99051152976149,5.55990068554084,1.89397670297827,0,0.229902104433473,1.0803727788321,0.30140963567143,0.408218994907967,0.2562274405697,0.655912071918102,4.39795730256327,0,0,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,28.7464341195904,8.72686869989696,0.213288250535234,0.464473343720877,2.83508414908605,6.6555563125703,4.00280478920767,5.89699440948933,11.8632265386128,5.10566759644434,4.52403375840485,3.78017296878187,7.40863531052657,15.2799299471218,6.70027954611552,8.56307474993779,0,0.456994050438915,1.1270773567308,1.01825663922657,0.193952487167626,2.03393877681924,2.78240763346732,1.91893192373483,1.41298855057237,2.34454611451421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0,1.80899805217755,0,0,0.632073515871632,0,0,10.2131881726136,0,0,0.428674070063185,0.177340233642274,0.356737635204141,0.658196082408484,1.2178597964584,0,0,0.220528398054962,1.6488625294148,0.807322133479528,1.62844897306021,0.835606408021955,0.492422699235184,10.7847909553045,2.96680483216816,0,0,0,0,0,0,0,0,0.138199973804424,7.63736494412091,0.158167996790568,0.609958401380546,0.972048067396211,0.209088296014469,2.18362563746178,1.21377911746339,2.56225712748541,3.66458318777641,7.51766845092399,0,1.12738587736838,0.598066184175915,0.496375471371293,0,0.387479470433193,0.675824501963113,0.352071715937262,1.5624526181274,5.87212328783981,4.1069300540421,2.30424005006292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0,0,43.8540378453072,0,0.73260649706906,0.857473516316263,0.501572104035363,1.6942555278512,0.460325236507177,1.71868654031819,1.71853182343688,2.74033007908257,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,1.2869045591501,0.222246727801615,0.824140228955577,0,1.01078884705519,0,0.377252682772152,0.749132059759059,0.768301828858431,0.574354689556133,0.952587382566147,0.115884325944855,0.578727661391115,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.338458431566706,0.182927972872773,0.789209134313529,0.271608227691724,1.12228454331548,1.06771516311757,0.394017929502254,0,0.464810523557898,0.964533054905707,0.749431733813838,0.935726433781634,1.50409737833809,0.191288332068843,0.220591419119515,0|short_description=p2@Sh3gl2}} | ||
|EntrezGene=20404 | |||
|HGNC= | |||
|UniProt=A2ALV3 | |||
|association_with_transcript=25bp_to_ENSMUST00000107188_5end | |||
|description=CAGE_peak_2_at_Sh3gl2_5end | |||
|id=chr4:84851055..84851096,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.20e-07!9;CL:0002251!2.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.29e-10,9;CL:0002251,2.29e-10,9;CL:0000239,3.99e-08,6;CL:0000677,3.99e-08,6;CL:0000584,3.99e-08,6;CL:0000075,9.77e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.16e-11!43;UBERON:0000344!2.88e-11!15;UBERON:0005409!5.70e-11!59;UBERON:0001242!4.28e-10!13;UBERON:0000060!4.28e-10!13;UBERON:0001262!4.28e-10!13;UBERON:0004786!4.28e-10!13;UBERON:0003350!2.20e-07!9;UBERON:0004808!2.20e-07!9;UBERON:0001277!2.20e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.39e-27,31;UBERON:0005409,6.66e-22,47;UBERON:0000344,3.17e-16,15;UBERON:0001242,1.87e-14,13;UBERON:0001262,1.87e-14,13;UBERON:0004786,1.87e-14,13;UBERON:0003350,2.29e-10,9;UBERON:0004808,2.29e-10,9;UBERON:0001277,2.29e-10,9;UBERON:0004923,3.64e-08,24;UBERON:0000485,5.68e-08,11 | |||
|phase1_expression=0.160148847104794,28.964958834067,21.3849642513082,37.5055622020469,40.0716583957078,11.5836697619204,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,5.91971964335605,6.65286915094793,19.5238867799107,11.630573896295,12.4973314957816,12.5415456841207,12.8535366177565,4.21287970245079,0,0,0,4.33277429626912,3.65716219788683,5.3084032628216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,1.10434270475807,0.244981598429908,0,0,2.20231761998777,2.68143409978894,2.15049146558741,0.263772575460388,0.457438218012048,0.52091337055676,3.35019598801657,1.68828783009504,2.13917546887534,1.76777151284201,1.42371680799103,1.1183966749518,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0.506719730950197,1.01104889002957,3.19714863213368,0,1.33597925158342,0,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0,0,0,0,0,0,7.45567044872489,12.296793474485,8.79676168616511,10.2182822083437,0,0,0,4.19413790333504,0.457500602818626,0.376963056338593,1.39059456153821,1.27857728665165,2.70124457927428,1.94689515681309,0.407357455401265,1.99051152976149,5.55990068554084,1.89397670297827,0,0.229902104433473,1.0803727788321,0.30140963567143,0.408218994907967,0.2562274405697,0.655912071918102,4.39795730256327,0,0,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,28.7464341195904,8.72686869989696,0.213288250535234,0.464473343720877,2.83508414908605,6.6555563125703,4.00280478920767,5.89699440948933,11.8632265386128,5.10566759644434,4.52403375840485,3.78017296878187,7.40863531052657,15.2799299471218,6.70027954611552,8.56307474993779,0,0.456994050438915,1.1270773567308,1.01825663922657,0.193952487167626,2.03393877681924,2.78240763346732,1.91893192373483,1.41298855057237,2.34454611451421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0,1.80899805217755,0,0,0.632073515871632,0,0,10.2131881726136,0,0,0.428674070063185,0.177340233642274,0.356737635204141,0.658196082408484,1.2178597964584,0,0,0.220528398054962,1.6488625294148,0.807322133479528,1.62844897306021,0.835606408021955,0.492422699235184,10.7847909553045,2.96680483216816,0,0,0,0,0,0,0,0,0.138199973804424,7.63736494412091,0.158167996790568,0.609958401380546,0.972048067396211,0.209088296014469,2.18362563746178,1.21377911746339,2.56225712748541,3.66458318777641,7.51766845092399,0,1.12738587736838,0.598066184175915,0.496375471371293,0,0.387479470433193,0.675824501963113,0.352071715937262,1.5624526181274,5.87212328783981,4.1069300540421,2.30424005006292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0,0,43.8540378453072,0,0.73260649706906,0.857473516316263,0.501572104035363,1.6942555278512,0.460325236507177,1.71868654031819,1.71853182343688,2.74033007908257,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,1.2869045591501,0.222246727801615,0.824140228955577,0,1.01078884705519,0,0.377252682772152,0.749132059759059,0.768301828858431,0.574354689556133,0.952587382566147,0.115884325944855,0.578727661391115,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.338458431566706,0.182927972872773,0.789209134313529,0.271608227691724,1.12228454331548,1.06771516311757,0.394017929502254,0,0.464810523557898,0.964533054905707,0.749431733813838,0.935726433781634,1.50409737833809,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@Sh3gl2 | |||
}} |
Revision as of 05:31, 14 September 2013
Short description: | p2@Sh3gl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh3gl2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000107188_5end |
EntrezGene: | Sh3gl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.29e-10 | 9 |
epithelial cell of alimentary canal | 2.29e-10 | 9 |
brush border epithelial cell | 3.99e-08 | 6 |
gut absorptive cell | 3.99e-08 | 6 |
enterocyte | 3.99e-08 | 6 |
columnar/cuboidal epithelial cell | 9.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.39e-27 | 31 |
gastrointestinal system | 6.66e-22 | 47 |
mucosa | 3.17e-16 | 15 |
intestinal mucosa | 1.87e-14 | 13 |
wall of intestine | 1.87e-14 | 13 |
gastrointestinal system mucosa | 1.87e-14 | 13 |
epithelium of mucosa | 2.29e-10 | 9 |
gastrointestinal system epithelium | 2.29e-10 | 9 |
intestinal epithelium | 2.29e-10 | 9 |
organ component layer | 3.64e-08 | 24 |
simple columnar epithelium | 5.68e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.