FFCP PHASE1:Hg19::chr8:68256051..68256062,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10565|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15772|TSSclassifier=S|UniProt=Q9Y6D6,E5RJN9|association_with_transcript=-139bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end|description=CAGE_peak_5_at_ARFGEF1_5end|id=chr8:68256051..68256062,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009117;2.08e-07;10!UBERON:0005564;2.08e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.91e-11!115|ontology_enrichment_uberon_v019=UBERON:0003296;9.60e-12;4!UBERON:0010133;9.60e-12;4!UBERON:0000473;2.30e-09;8!UBERON:0003135;2.54e-09;11|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.21e-11,4;UBERON:0010133,1.21e-11,4;UBERON:0000473,1.76e-09,8;UBERON:0003135,2.36e-09,11;UBERON:0000007,7.92e-07,2|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.410623275218653,1.12988375635323,0.458480434487708,0.410502947249729,0.314843125254717,0.786728553697808,0,0,0,0,0.739508020333575,0.542270404062111,0.568676929949686,0,0,0.802177789880567,0.434021741431704,0.447830948479849,0.971680998056939,0.257575567634187,0.581592955118259,1.13362783106643,0.727752183563449,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0.689491361473237,1.93645405075148,1.35426486594342,0.376484679085209,0,0,1.53041946185451,0.320929027076094,0,0,0.398927315243264,0,0.870627715885752,1.70215567407342,1.24564449799115,0.251248665256743,0,0.65156653411535,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0.32592226663359,0.946895611469467,0,0,0,0,0.270803863765016,0.25618263945135,0,0.328875809207352,0.276350017785848,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,1.27426165729639,0,0,0.301150238155546,0.383959833463255,0,0.473554504088034,0,1.00803371612366,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.851363990735132,0,0.370784442784429,0.324547393654683,0.870648686496336,0.26591592103773,0.238490624305342,1.14398982156026,1.11437250398869,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,0,0.436094052142534,0.496971951695318,0.25326102332916,1.19168262731897,1.72101972449288,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.250237039743928,1.10825646193673,0,0,0.600952235626387,0,0.179389635688862,0.427114777637135,0,0,0.103052529238439,1.03056216018252,0.37223371266318,0.506328996723799,0.389748020644795,0.504867548488229,0.368199594569197,0,1.06502877754984,0.503760491138201,0.169560592310488,0,0.545492241181669,2.29443676311203,0.121973706129595,0.265059536642971,0.580969714347592,0.414644220061482,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0.4115740113314,0,0,1.96565443335525,0,2.6487785964879,0.245976877086227,0.171567810298526,0.658501712451753,0,0.502644862058154,0.185176890317059,0,0,0,0.695582429850461,0.117408694235822,0,0,0.380508304469197,0,0,0.738651018262192,0.468008530278475,0.297262324577456,0,0.335964256397719,0.283550194484773,0.985143749731331,0.581267877027924,0.383382679165211,0,0.528290604079356,0.207328115540772,0.288239906833923,0.37872730027914,0,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,1.32969058292435,0,0,0,0,0,0,0,0,0,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.723906533337896,0.61642896765115,0.537182889719687,0.448340575974109,0.197030760201927,0.431255149719035,0.898401253958239,0.76228387266739,0,0,0.335032530668698,0,0,2.99161459204025,0.414415513436035,0.36807447515742,0,0.542530047399471,0.623912584592421,0.892144943985809,0.315404830067869,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0.260650843404249,0,0,0.413536052245775,0.431428401637234,0.533637789017222,0.606255142892519,0,0,0.744323423456331,0.767309866440312,0,0.2562782985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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10565 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15772 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6D6,E5RJN9 | |||
|association_with_transcript=-139bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end | |||
|description=CAGE_peak_5_at_ARFGEF1_5end | |||
|id=chr8:68256051..68256062,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-07;10!UBERON:0005564;2.08e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.91e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;9.60e-12;4!UBERON:0010133;9.60e-12;4!UBERON:0000473;2.30e-09;8!UBERON:0003135;2.54e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.21e-11,4;UBERON:0010133,1.21e-11,4;UBERON:0000473,1.76e-09,8;UBERON:0003135,2.36e-09,11;UBERON:0000007,7.92e-07,2 | |||
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| |||
|short_description=p5@ARFGEF1 | |||
}} |
Revision as of 05:54, 14 September 2013
Short description: | p5@ARFGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ARFGEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000262215, ENST00000519436, NM_006421, uc003xxo.1_5end |
EntrezGene: | ARFGEF1 |
HGNC: | 15772 |
UniProt: | Q9Y6D6E5RJN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.21e-11 | 4 |
neuroendocrine gland | 1.21e-11 | 4 |
testis | 1.76e-09 | 8 |
male reproductive organ | 2.36e-09 | 11 |
pituitary gland | 7.92e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.