FFCP PHASE1:Mm9::chr5:124875958..124876010,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=243272|HGNC=|MCL_coexpression_id=0|UniProt=B2RRI2,E9Q429,Q3TMM7|association_with_transcript=-35bp_to_ENSMUST00000065263,ENSMUST00000100711,NM_001081203,uc008zpq.1,uc008zpt.1_5end|description=CAGE_peak_2_at_Sbno1_5end|id=chr5:124875958..124876010,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.45e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.59e-08,43;UBERON:0001048,3.20e-07,134;UBERON:0007811,3.76e-07,36;UBERON:0007023,4.38e-07,51|phase1_expression=3.68342348341026,3.14077866875425,2.27499619694768,2.72217790176147,2.00358291978539,4.53274034162102,3.27057696833736,3.61545305636414,2.25261955442667,2.34064526321993,3.5955773327356,3.03134204182278,4.28001824828014,2.97229368224591,3.33109761815663,2.63217847606774,2.09868563438444,4.41647031501533,4.38766187538364,3.81950686618227,5.78294373027274,2.38298282882125,1.56719873483361,3.67982572424835,2.06468352960453,0,0.430761996159075,1.939241094173,2.66032787238923,2.77233142735924,1.33038306393183,1.90509202037889,1.84519436275371,0,1.73310971850765,1.32987716286794,1.22501613757421,2.51118978442145,3.1253413780952,4.18818995179039,0.588231488031014,3.41522742479223,3.88408282424923,2.14024590558481,2.02753862439029,1.46837401729345,0,0.436050312760893,0.439372365468944,0,0,0,6.20795642413625,5.07753499407941,4.03312558970957,0.257259436035947,0.85960031981627,2.06268836910977,4.04632921719196,2.64495489636016,1.26766280701236,0.677689064138264,0,0.899899717281399,1.97773272513395,0.7104801149461,0.599200221036809,0.384218305321555,1.45165457231869,2.29510095163874,1.47227472945967,1.14260393761521,0.883474163806454,0.979926393719632,1.72521847832825,5.51531271966013,4.40463523997555,3.06449611404451,1.53606533256243,1.45074916503213,1.82975287204819,0.52091337055676,2.51264699101243,0.56276261003168,0.916789486660861,2.65165726926301,1.85083185038834,3.91438836233131,0.605809546665472,0.604572480854284,1.15945795480671,0,0.679971333707751,0,1.94932925234301,0.448026887097336,2.94933282276679,1.53387290320252,1.03914401841148,1.7666978725517,2.53518155598025,10.2661181931454,2.54805239706646,14.2213340630666,1.08245520505607,1.01343946190039,0,2.51204535381932,3.36619248741323,6.23456984072264,1.90833859442749,0.304465478312141,0.230615497256059,1.65794904607885,2.82212897125692,1.63366568728578,8.40462890296871,2.31358971071859,6.19227386364912,2.91180329905337,1.76673214768315,3.87900202508178,5.59175283654366,10.2473278954042,5.44561437714983,2.55457055208591,1.1981512450592,1.19980546198682,1.77898317902291,5.99162557619291,7.32000964509802,4.14659361972453,5.21472960576829,3.83573185995496,4.98691306942944,4.05603157669394,4.27725328171328,2.98576729464223,4.29628689337247,5.05060454127538,5.72529949035896,5.0578462975364,3.78130472591233,3.0140963567143,5.10273743634959,5.89323113310309,5.34099829990454,7.50239775143145,3.88022387279116,8.50977360755187,3.69497360744293,5.69908904311695,2.78047249225598,3.83077383174383,4.11564272815887,4.17971960318836,1.40442637462647,1.80143534980301,0.852490498186778,4.55676699578104,5.15957331958412,2.52086886045421,6.39210786080068,4.13204886669548,2.31400669331067,2.09280550275367,2.95100741539581,3.26942958628075,3.94943639792353,2.79084688934462,5.10733500138891,3.36259971078264,2.85415149878366,2.41571553768669,6.09840850835969,4.73361216944708,2.31293148088659,1.32225283331772,4.05247676016945,3.71578674976702,6.95884291139304,4.63872106633688,4.89231696458715,3.42406127002606,3.79623249235609,1.31759163779209,4.52403375840485,2.98434708061726,3.11942539390592,1.79763881730844,1.72910439899755,1.99141273254367,2.27601481143698,2.39921876480431,9.01661885384643,2.44381593414377,2.32742984601151,4.27828501330943,4.11037491307672,3.24742325555125,2.19798218977925,2.34454611451421,2.07516838961004,4.50481785433454,5.30709286805648,3.82265591054251,6.8972441272091,4.10001171579109,2.5462585178142,4.02774592431135,4.21551589615092,1.37280706594041,12.9391385874619,2.60498663367952,2.18426371180192,1.26289438973556,0.717589654087649,1.92977408545347,4.61882975416512,3.60033682363921,5.0519142697028,3.22515662972857,3.28566347603903,6.365237782789,7.85544014923845,3.70753930929818,5.04432461139811,8.19419351700467,6.37819074629948,2.94953966488328,2.24490476425664,1.59113964439663,3.01582567878545,3.26343410291226,3.93411418415229,7.17435540392304,6.10092241953609,3.8679856575427,2.29508923527346,2.52470927204373,0,0.780877488593277,1.50796378412959,0.477937595905104,0,1.98153571552183,0,0.876767573733936,0.395287777946524,9.96096080907602,4.68402281187286,1.6025904330053,4.23506094319298,5.93892442701128,2.65490276679926,1.94224508923985,2.41858845571801,2.82907619633847,1.18120757152309,3.68922177532713,2.84271122485043,3.27180356529755,2.49548164869305,2.21225730555071,3.16255825724996,5.15677716240934,8.17055053809091,2.88097750450096,1.4229455216103,1.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| ||
|EntrezGene=243272 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=B2RRI2,E9Q429,Q3TMM7 | |||
|association_with_transcript=-35bp_to_ENSMUST00000065263,ENSMUST00000100711,NM_001081203,uc008zpq.1,uc008zpt.1_5end | |||
|description=CAGE_peak_2_at_Sbno1_5end | |||
|id=chr5:124875958..124876010,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.45e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,4.59e-08,43;UBERON:0001048,3.20e-07,134;UBERON:0007811,3.76e-07,36;UBERON:0007023,4.38e-07,51 | |||
|phase1_expression=3.68342348341026,3.14077866875425,2.27499619694768,2.72217790176147,2.00358291978539,4.53274034162102,3.27057696833736,3.61545305636414,2.25261955442667,2.34064526321993,3.5955773327356,3.03134204182278,4.28001824828014,2.97229368224591,3.33109761815663,2.63217847606774,2.09868563438444,4.41647031501533,4.38766187538364,3.81950686618227,5.78294373027274,2.38298282882125,1.56719873483361,3.67982572424835,2.06468352960453,0,0.430761996159075,1.939241094173,2.66032787238923,2.77233142735924,1.33038306393183,1.90509202037889,1.84519436275371,0,1.73310971850765,1.32987716286794,1.22501613757421,2.51118978442145,3.1253413780952,4.18818995179039,0.588231488031014,3.41522742479223,3.88408282424923,2.14024590558481,2.02753862439029,1.46837401729345,0,0.436050312760893,0.439372365468944,0,0,0,6.20795642413625,5.07753499407941,4.03312558970957,0.257259436035947,0.85960031981627,2.06268836910977,4.04632921719196,2.64495489636016,1.26766280701236,0.677689064138264,0,0.899899717281399,1.97773272513395,0.7104801149461,0.599200221036809,0.384218305321555,1.45165457231869,2.29510095163874,1.47227472945967,1.14260393761521,0.883474163806454,0.979926393719632,1.72521847832825,5.51531271966013,4.40463523997555,3.06449611404451,1.53606533256243,1.45074916503213,1.82975287204819,0.52091337055676,2.51264699101243,0.56276261003168,0.916789486660861,2.65165726926301,1.85083185038834,3.91438836233131,0.605809546665472,0.604572480854284,1.15945795480671,0,0.679971333707751,0,1.94932925234301,0.448026887097336,2.94933282276679,1.53387290320252,1.03914401841148,1.7666978725517,2.53518155598025,10.2661181931454,2.54805239706646,14.2213340630666,1.08245520505607,1.01343946190039,0,2.51204535381932,3.36619248741323,6.23456984072264,1.90833859442749,0.304465478312141,0.230615497256059,1.65794904607885,2.82212897125692,1.63366568728578,8.40462890296871,2.31358971071859,6.19227386364912,2.91180329905337,1.76673214768315,3.87900202508178,5.59175283654366,10.2473278954042,5.44561437714983,2.55457055208591,1.1981512450592,1.19980546198682,1.77898317902291,5.99162557619291,7.32000964509802,4.14659361972453,5.21472960576829,3.83573185995496,4.98691306942944,4.05603157669394,4.27725328171328,2.98576729464223,4.29628689337247,5.05060454127538,5.72529949035896,5.0578462975364,3.78130472591233,3.0140963567143,5.10273743634959,5.89323113310309,5.34099829990454,7.50239775143145,3.88022387279116,8.50977360755187,3.69497360744293,5.69908904311695,2.78047249225598,3.83077383174383,4.11564272815887,4.17971960318836,1.40442637462647,1.80143534980301,0.852490498186778,4.55676699578104,5.15957331958412,2.52086886045421,6.39210786080068,4.13204886669548,2.31400669331067,2.09280550275367,2.95100741539581,3.26942958628075,3.94943639792353,2.79084688934462,5.10733500138891,3.36259971078264,2.85415149878366,2.41571553768669,6.09840850835969,4.73361216944708,2.31293148088659,1.32225283331772,4.05247676016945,3.71578674976702,6.95884291139304,4.63872106633688,4.89231696458715,3.42406127002606,3.79623249235609,1.31759163779209,4.52403375840485,2.98434708061726,3.11942539390592,1.79763881730844,1.72910439899755,1.99141273254367,2.27601481143698,2.39921876480431,9.01661885384643,2.44381593414377,2.32742984601151,4.27828501330943,4.11037491307672,3.24742325555125,2.19798218977925,2.34454611451421,2.07516838961004,4.50481785433454,5.30709286805648,3.82265591054251,6.8972441272091,4.10001171579109,2.5462585178142,4.02774592431135,4.21551589615092,1.37280706594041,12.9391385874619,2.60498663367952,2.18426371180192,1.26289438973556,0.717589654087649,1.92977408545347,4.61882975416512,3.60033682363921,5.0519142697028,3.22515662972857,3.28566347603903,6.365237782789,7.85544014923845,3.70753930929818,5.04432461139811,8.19419351700467,6.37819074629948,2.94953966488328,2.24490476425664,1.59113964439663,3.01582567878545,3.26343410291226,3.93411418415229,7.17435540392304,6.10092241953609,3.8679856575427,2.29508923527346,2.52470927204373,0,0.780877488593277,1.50796378412959,0.477937595905104,0,1.98153571552183,0,0.876767573733936,0.395287777946524,9.96096080907602,4.68402281187286,1.6025904330053,4.23506094319298,5.93892442701128,2.65490276679926,1.94224508923985,2.41858845571801,2.82907619633847,1.18120757152309,3.68922177532713,2.84271122485043,3.27180356529755,2.49548164869305,2.21225730555071,3.16255825724996,5.15677716240934,8.17055053809091,2.88097750450096,1.4229455216103,1.92903331528433,4.61084607469911,2.14042581122485,1.97458824722545,1.2178597964584,3.05073220482823,5.50763384245932,1.98475558249466,6.76033637060068,4.68246837418126,5.06628569396509,4.41677672811605,5.74493149107714,1.7488850197791,6.30446026835733,4.61351378154202,2.88941615148511,1.11116716421827,6.02779062415011,3.96413260390973,3.20289442489132,1.69978429993855,3.21888340344413,2.48759952847963,2.86401185404534,6.95939185878498,5.89626454667861,1.40406943068342,1.46361807210128,1.9652630737156,1.48350781023303,4.79390043206948,2.87931536182433,2.20345454596048,4.34937519160848,64.8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| |||
|short_description=p2@Sbno1 | |||
}} | |||
Revision as of 06:27, 14 September 2013
| Short description: | p2@Sbno1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Sbno1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | -35bp_to_ENSMUST00000065263, ENSMUST00000100711, NM_001081203, uc008zpq.1, uc008zpt.1_5end |
| EntrezGene: | Sbno1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 4.59e-08 | 43 |
| primordium | 3.20e-07 | 134 |
| craniocervical region | 3.76e-07 | 36 |
| adult organism | 4.38e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
