FFCP PHASE1:Mm9::chr5:135488682..135488693,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135488682..135488693,-|id=chr5:135488682..135488693,-|ontology_enrichment_celltype=CL:0000239!2.23e-10!6;CL:0000677!2.23e-10!6;CL:0000212!2.23e-10!6;CL:0000584!2.23e-10!6;CL:0002453!4.86e-09!8;CL:0000075!9.88e-09!7;CL:0000333!5.83e-07!10;CL:0000095!5.83e-07!10;CL:0000243!5.83e-07!10;CL:0000123!5.83e-07!10;CL:0000125!5.83e-07!10;CL:0000030!5.83e-07!10;CL:0000339!5.83e-07!10|ontology_enrichment_celltype_v019_2=CL:0000239,3.39e-23,6;CL:0000677,3.39e-23,6;CL:0000584,3.39e-23,6;CL:0000075,8.06e-20,7;CL:0002563,2.60e-15,9;CL:0002251,2.60e-15,9;CL:0000682,9.42e-13,3;CL:0000066,1.60e-11,25;CL:0000473,3.30e-09,7;CL:0002076,5.58e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.84e-15!15;UBERON:0000160!9.93e-13!43;UBERON:0001242!3.71e-12!13;UBERON:0000060!3.71e-12!13;UBERON:0001262!3.71e-12!13;UBERON:0004786!3.71e-12!13;UBERON:0005409!1.99e-09!59;UBERON:0004923!2.36e-09!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.19e-36,15;UBERON:0001242,2.15e-29,13;UBERON:0001262,2.15e-29,13;UBERON:0004786,2.15e-29,13;UBERON:0000160,1.87e-22,31;UBERON:0004923,7.23e-22,24;UBERON:0005409,3.59e-16,47;UBERON:0003350,2.60e-15,9;UBERON:0004808,2.60e-15,9;UBERON:0001277,2.60e-15,9;UBERON:0000331,1.49e-13,3;UBERON:0002116,1.49e-13,3;UBERON:0001204,1.49e-13,3;UBERON:0001168,1.49e-13,3;UBERON:0000485,1.95e-12,11;UBERON:0002108,2.82e-10,4;UBERON:0001962,1.47e-08,2;UBERON:0001961,1.47e-08,2;UBERON:0001744,1.47e-08,2;UBERON:0001007,9.79e-07,116;UBERON:0001555,9.79e-07,116;UBERON:0007026,9.79e-07,116|phase1_expression=0.160148847104794,5.23463111459042,4.09499315450582,2.72217790176147,1.50268718983904,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.60586496747019,3.44539178469012,3.87685796543167,3.01659725760245,6.46079626151671,5.29263272495855,5.76499327703792,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.304130793658544,0.183546752161682,3.9119567217402,0.436050312760893,0,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0,0.201683524623343,0.22237804384487,0,1.42358718463353,0.658795818896044,0,0.198956472041151,0.38992817423824,1.79763881730844,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,1.68499465279331,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:135488682..135488693,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:135488682..135488693,- | |||
|id=chr5:135488682..135488693,- | |||
|ontology_enrichment_celltype=CL:0000239!2.23e-10!6;CL:0000677!2.23e-10!6;CL:0000212!2.23e-10!6;CL:0000584!2.23e-10!6;CL:0002453!4.86e-09!8;CL:0000075!9.88e-09!7;CL:0000333!5.83e-07!10;CL:0000095!5.83e-07!10;CL:0000243!5.83e-07!10;CL:0000123!5.83e-07!10;CL:0000125!5.83e-07!10;CL:0000030!5.83e-07!10;CL:0000339!5.83e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.39e-23,6;CL:0000677,3.39e-23,6;CL:0000584,3.39e-23,6;CL:0000075,8.06e-20,7;CL:0002563,2.60e-15,9;CL:0002251,2.60e-15,9;CL:0000682,9.42e-13,3;CL:0000066,1.60e-11,25;CL:0000473,3.30e-09,7;CL:0002076,5.58e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.84e-15!15;UBERON:0000160!9.93e-13!43;UBERON:0001242!3.71e-12!13;UBERON:0000060!3.71e-12!13;UBERON:0001262!3.71e-12!13;UBERON:0004786!3.71e-12!13;UBERON:0005409!1.99e-09!59;UBERON:0004923!2.36e-09!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.19e-36,15;UBERON:0001242,2.15e-29,13;UBERON:0001262,2.15e-29,13;UBERON:0004786,2.15e-29,13;UBERON:0000160,1.87e-22,31;UBERON:0004923,7.23e-22,24;UBERON:0005409,3.59e-16,47;UBERON:0003350,2.60e-15,9;UBERON:0004808,2.60e-15,9;UBERON:0001277,2.60e-15,9;UBERON:0000331,1.49e-13,3;UBERON:0002116,1.49e-13,3;UBERON:0001204,1.49e-13,3;UBERON:0001168,1.49e-13,3;UBERON:0000485,1.95e-12,11;UBERON:0002108,2.82e-10,4;UBERON:0001962,1.47e-08,2;UBERON:0001961,1.47e-08,2;UBERON:0001744,1.47e-08,2;UBERON:0001007,9.79e-07,116;UBERON:0001555,9.79e-07,116;UBERON:0007026,9.79e-07,116 | |||
|phase1_expression=0.160148847104794,5.23463111459042,4.09499315450582,2.72217790176147,1.50268718983904,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.60586496747019,3.44539178469012,3.87685796543167,3.01659725760245,6.46079626151671,5.29263272495855,5.76499327703792,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.304130793658544,0.183546752161682,3.9119567217402,0.436050312760893,0,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0,0.201683524623343,0.22237804384487,0,1.42358718463353,0.658795818896044,0,0.198956472041151,0.38992817423824,1.79763881730844,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,1.68499465279331,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:135488682..135488693,- | |||
}} |
Revision as of 06:38, 14 September 2013
Short description: | p@chr5:135488682..135488693, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135488682..135488693, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.39e-23 | 6 |
gut absorptive cell | 3.39e-23 | 6 |
enterocyte | 3.39e-23 | 6 |
columnar/cuboidal epithelial cell | 8.06e-20 | 7 |
intestinal epithelial cell | 2.60e-15 | 9 |
epithelial cell of alimentary canal | 2.60e-15 | 9 |
M cell of gut | 9.42e-13 | 3 |
epithelial cell | 1.60e-11 | 25 |
defensive cell | 3.30e-09 | 7 |
endo-epithelial cell | 5.58e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.19e-36 | 15 |
intestinal mucosa | 2.15e-29 | 13 |
wall of intestine | 2.15e-29 | 13 |
gastrointestinal system mucosa | 2.15e-29 | 13 |
intestine | 1.87e-22 | 31 |
organ component layer | 7.23e-22 | 24 |
gastrointestinal system | 3.59e-16 | 47 |
epithelium of mucosa | 2.60e-15 | 9 |
gastrointestinal system epithelium | 2.60e-15 | 9 |
intestinal epithelium | 2.60e-15 | 9 |
ileal mucosa | 1.49e-13 | 3 |
ileum | 1.49e-13 | 3 |
mucosa of small intestine | 1.49e-13 | 3 |
wall of small intestine | 1.49e-13 | 3 |
simple columnar epithelium | 1.95e-12 | 11 |
small intestine | 2.82e-10 | 4 |
gut-associated lymphoid tissue | 1.47e-08 | 2 |
mucosa-associated lymphoid tissue | 1.47e-08 | 2 |
lymphoid tissue | 1.47e-08 | 2 |
digestive system | 9.79e-07 | 116 |
digestive tract | 9.79e-07 | 116 |
primitive gut | 9.79e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.