FFCP PHASE1:Mm9::chr5:136363775..136363793,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15507|HGNC=|MCL_coexpression_id=2668|UniProt=P14602,Q545F4,D3YZ06|association_with_transcript=0bp_to_ENSMUST00000005077,NM_013560,uc008zze.2,uc012eeq.1_5end|description=CAGE_peak_3_at_Hspb1_5end|id=chr5:136363775..136363793,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,7.29e-08,7;CL:0000128,3.70e-07,6;CL:0000126,3.70e-07,6;CL:0000127,3.70e-07,6;CL:0000680,6.99e-07,6;CL:0000187,6.99e-07,6;CL:0000056,6.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!2.62e-10!26;UBERON:0000990!2.62e-10!26;UBERON:0003133!1.53e-09!24;UBERON:0000991!6.77e-07!18;UBERON:0005564!6.77e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.06e-12,26;UBERON:0000990,3.06e-12,26;UBERON:0003133,4.29e-11,24;UBERON:0000991,5.59e-08,18;UBERON:0005564,5.59e-08,18;UBERON:0004176,1.56e-07,17;UBERON:0009196,1.56e-07,17;UBERON:0009117,1.56e-07,17;UBERON:0000473,3.39e-07,14;UBERON:0003101,3.61e-07,16;UBERON:0000079,3.61e-07,16;UBERON:0003064,9.03e-07,14|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.9028013572429,3.14268486780495,2.0190142737785,11.7358701652206,1.96222640742402,2.41654801007919,4.6663175777828,5.17949760013841,4.31257693094915,0,0,0,5.14518872071894,2.0057340795713,6.18806510732931,0.202316460859598,0,0,7.11573517345177,4.4464739805557,0.449949858640699,0,0,2.39680088414724,0.768436610643109,0,0.135005938331691,0,0.856952953211411,0.883474163806454,0,0,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0,0,0,0,0,0.589257170947335,0.284743361598206,0,0.454357159999104,0.377857800533928,4.63783181922684,1.72084775396277,0.679971333707751,1.07940638327563,0.649776417447669,1.79210754838934,0.140444420131752,0,0,0,0.281686839553361,0,0,0,3.24736561516821,4.05375784760158,2.52762222507392,0.11418387971906,0,1.63286352971307,1.21439728736295,1.82679286987285,1.38369298353635,1.80867168663147,1.41106448562846,2.13633205260448,4.6967043869531,1.15679485535929,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,1.01839363850316,0.373220911830279,0.758168275301024,0.841767423545896,0.650602214813519,1.14951052216736,0.900310649026746,0.90422890701429,0.136072998302656,0.512454881139399,0.281105173679186,1.03481348295606,0.862271971731369,1.13463648100692,1.40760899331159,1.53437012699302,1.11218899690239,3.48252166522167,2.67516777330327,1.39323986772945,0,0.257347907114715,0,0.828503090142008,0,0.900310307305074,0.473489471170421,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.700592054203017,0.16455984991348,1.14917224855367,0.405344047729279,0.438599962275997,1.09775057645525,0.805238512562231,0.420579897128254,0,0,0.264450566663544,1.06644125267617,0.464473343720877,0.515469845288373,0.80673409849337,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0.685491075658373,3.38123207019241,0.610953983535943,0.581857461502877,0.561086559122548,0.379419222745544,0.295220295959204,0.627994911365499,0.370191491765402,0.592905254174298,0.166845105716094,0.786235980452812,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.568474235311454,0.488894929326078,0.678980343100753,1.64283173801951,0.670025029767263,0.476087281772027,0.975668239288994,0.945810864637146,1.10732344824387,1.11618338060241,0.491589944147214,0.690739927463582,0.723245292907558,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,0,0,1.57754109708128,1.95219372148319,1.93881057959519,0,1.11399337041197,0,0.809621403349789,1.75353514746787,1.18586333383957,0.321321316421807,1.13552068166615,2.13678724400706,0.81443479676788,1.31976098378028,1.32745138339963,1.45668381692989,1.51161778482376,1.50884063804718,1.77181135728464,1.84461088766356,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.720244376125241,1.03486947026204,0.857348140126369,1.24138163549592,0.891844088010353,1.15184314421485,0,7.97883807416615,9.74427525973573,1.98475558249466,1.81374878235628,3.39075296061402,2.17126529741361,1.67121281604391,1.14898629821543,0,0.556275906031529,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0.552799895217695,0,0.790839983952838,1.62655573701479,1.08005340821801,1.25452977608681,1.74690050996942,0.674321731924103,0.495920734352016,1.83229159388821,0,0,2.25477175473676,1.79419855252775,1.82004339502807,1.55560950675238,3.61647505737647,1.520605129417,3.16864544343536,1.5624526181274,1.99232754408851,1.20792060413003,0.576060012515731,0.316011120628178,1.41907650703115,1.02710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,1.36038230169127,8.2134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| ||
|EntrezGene=15507 | |||
|HGNC= | |||
|MCL_coexpression_id=2668 | |||
|UniProt=P14602,Q545F4,D3YZ06 | |||
|association_with_transcript=0bp_to_ENSMUST00000005077,NM_013560,uc008zze.2,uc012eeq.1_5end | |||
|description=CAGE_peak_3_at_Hspb1_5end | |||
|id=chr5:136363775..136363793,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.29e-08,7;CL:0000128,3.70e-07,6;CL:0000126,3.70e-07,6;CL:0000127,3.70e-07,6;CL:0000680,6.99e-07,6;CL:0000187,6.99e-07,6;CL:0000056,6.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!2.62e-10!26;UBERON:0000990!2.62e-10!26;UBERON:0003133!1.53e-09!24;UBERON:0000991!6.77e-07!18;UBERON:0005564!6.77e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.06e-12,26;UBERON:0000990,3.06e-12,26;UBERON:0003133,4.29e-11,24;UBERON:0000991,5.59e-08,18;UBERON:0005564,5.59e-08,18;UBERON:0004176,1.56e-07,17;UBERON:0009196,1.56e-07,17;UBERON:0009117,1.56e-07,17;UBERON:0000473,3.39e-07,14;UBERON:0003101,3.61e-07,16;UBERON:0000079,3.61e-07,16;UBERON:0003064,9.03e-07,14 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,3.9028013572429,3.14268486780495,2.0190142737785,11.7358701652206,1.96222640742402,2.41654801007919,4.6663175777828,5.17949760013841,4.31257693094915,0,0,0,5.14518872071894,2.0057340795713,6.18806510732931,0.202316460859598,0,0,7.11573517345177,4.4464739805557,0.449949858640699,0,0,2.39680088414724,0.768436610643109,0,0.135005938331691,0,0.856952953211411,0.883474163806454,0,0,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0,0,0,0,0,0.589257170947335,0.284743361598206,0,0.454357159999104,0.377857800533928,4.63783181922684,1.72084775396277,0.679971333707751,1.07940638327563,0.649776417447669,1.79210754838934,0.140444420131752,0,0,0,0.281686839553361,0,0,0,3.24736561516821,4.05375784760158,2.52762222507392,0.11418387971906,0,1.63286352971307,1.21439728736295,1.82679286987285,1.38369298353635,1.80867168663147,1.41106448562846,2.13633205260448,4.6967043869531,1.15679485535929,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,1.01839363850316,0.373220911830279,0.758168275301024,0.841767423545896,0.650602214813519,1.14951052216736,0.900310649026746,0.90422890701429,0.136072998302656,0.512454881139399,0.281105173679186,1.03481348295606,0.862271971731369,1.13463648100692,1.40760899331159,1.53437012699302,1.11218899690239,3.48252166522167,2.67516777330327,1.39323986772945,0,0.257347907114715,0,0.828503090142008,0,0.900310307305074,0.473489471170421,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.700592054203017,0.16455984991348,1.14917224855367,0.405344047729279,0.438599962275997,1.09775057645525,0.805238512562231,0.420579897128254,0,0,0.264450566663544,1.06644125267617,0.464473343720877,0.515469845288373,0.80673409849337,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0.685491075658373,3.38123207019241,0.610953983535943,0.581857461502877,0.561086559122548,0.379419222745544,0.295220295959204,0.627994911365499,0.370191491765402,0.592905254174298,0.166845105716094,0.786235980452812,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.568474235311454,0.488894929326078,0.678980343100753,1.64283173801951,0.670025029767263,0.476087281772027,0.975668239288994,0.945810864637146,1.10732344824387,1.11618338060241,0.491589944147214,0.690739927463582,0.723245292907558,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.234423373184406,0,0,1.57754109708128,1.95219372148319,1.93881057959519,0,1.11399337041197,0,0.809621403349789,1.75353514746787,1.18586333383957,0.321321316421807,1.13552068166615,2.13678724400706,0.81443479676788,1.31976098378028,1.32745138339963,1.45668381692989,1.51161778482376,1.50884063804718,1.77181135728464,1.84461088766356,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.720244376125241,1.03486947026204,0.857348140126369,1.24138163549592,0.891844088010353,1.15184314421485,0,7.97883807416615,9.74427525973573,1.98475558249466,1.81374878235628,3.39075296061402,2.17126529741361,1.67121281604391,1.14898629821543,0,0.556275906031529,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0.552799895217695,0,0.790839983952838,1.62655573701479,1.08005340821801,1.25452977608681,1.74690050996942,0.674321731924103,0.495920734352016,1.83229159388821,0,0,2.25477175473676,1.79419855252775,1.82004339502807,1.55560950675238,3.61647505737647,1.520605129417,3.16864544343536,1.5624526181274,1.99232754408851,1.20792060413003,0.576060012515731,0.316011120628178,1.41907650703115,1.02710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,1.36038230169127,8.21348027484039,8.07424709485281,7.21903850365537,1.73870634628971,1.87682475451182,1.64836461840539,2.14368379079066,3.00943262421218,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0.415149390336707,0.399024873401031,1.19513524027894,0.729320151204882,1.04806581313991,0.919217542250071,0.44449345560323,0.206035057238894,0.962757628775446,0.505394423527595,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.564656282491984,0.338458431566706,0.182927972872773,0.263069711437843,0.679020569229309,0,0.474540072496697,0.591026894253381,0.409231043169689,0.154936841185966,1.54325288784913,2.24829520144151,1.16965804222704,1.71896843238639,0.57386499620653,1.10295709559758,0.695603506861264 | |||
|short_description=p3@Hspb1 | |||
}} |
Revision as of 06:40, 14 September 2013
Short description: | p3@Hspb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hspb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2668 |
Association with transcript: | 0bp_to_ENSMUST00000005077, NM_013560, uc008zze.2, uc012eeq.1_5end |
EntrezGene: | Hspb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.29e-08 | 7 |
oligodendrocyte | 3.70e-07 | 6 |
macroglial cell | 3.70e-07 | 6 |
astrocyte | 3.70e-07 | 6 |
muscle precursor cell | 6.99e-07 | 6 |
muscle cell | 6.99e-07 | 6 |
myoblast | 6.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 3.06e-12 | 26 |
reproductive system | 3.06e-12 | 26 |
reproductive organ | 4.29e-11 | 24 |
gonad | 5.59e-08 | 18 |
gonad primordium | 5.59e-08 | 18 |
external genitalia | 1.56e-07 | 17 |
indifferent external genitalia | 1.56e-07 | 17 |
indifferent gonad | 1.56e-07 | 17 |
testis | 3.39e-07 | 14 |
male organism | 3.61e-07 | 16 |
male reproductive system | 3.61e-07 | 16 |
intermediate mesoderm | 9.03e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.