FFCP PHASE1:Mm9::chr5:31419075..31419086,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58522|HGNC=|MCL_coexpression_id=35|UniProt=Q9ERP3|association_with_transcript=0bp_to_ENSMUST00000013771_5end|description=CAGE_peak_3_at_Trim54_5end|id=chr5:31419075..31419086,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005418!5.56e-07!5;UBERON:0002472!5.56e-07!5;UBERON:0008784!5.56e-07!5;UBERON:0006058!5.56e-07!5;UBERON:0004709!5.56e-07!5;UBERON:0005420!5.56e-07!5;UBERON:0006057!5.56e-07!5;UBERON:0000978!5.56e-07!5;UBERON:0002103!5.56e-07!5;UBERON:0000376!5.56e-07!5;UBERON:0000154!5.56e-07!5;UBERON:0005730!5.56e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.79e-09,5;UBERON:0002472,7.79e-09,5;UBERON:0008784,7.79e-09,5;UBERON:0006058,7.79e-09,5;UBERON:0004709,7.79e-09,5;UBERON:0002529,7.79e-09,5;UBERON:0010538,7.79e-09,5;UBERON:0005420,7.79e-09,5;UBERON:0010758,7.79e-09,5;UBERON:0000978,7.79e-09,5;UBERON:0002103,7.79e-09,5;UBERON:0000376,7.79e-09,5;UBERON:0000154,7.79e-09,5;UBERON:0010709,7.79e-09,5;UBERON:0005730,7.79e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46044332606059,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,1.61766849947409,3.3126227769059,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11017426525233,0,1.05220927943237,0,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0.469052119962192,0,0,0,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0.820837320395476,3.32382119138008,3.36259971078264,3.29325172936576,11.9443712696731,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.983179888294428,0.690739927463582,0,0,0,0,0,0,0,0,19.6927323219411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,2.4732937941222,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,2.88030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,8.38902419376282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,2.00022055021454,1.23621034343337,0.962757628775446,2.02157769411038,1.2673964994512,0.943131706930381,1.03005658216871,1.15245274328765,0.861532034334199,0.476293691283074,1.15884325944855,0.77163688185482,1.23625770240992,1.61918812147837,0.342869252385415,0.354951612318675,0.953744759789284,1.0174249164263,1.41164070622996,1.09998990259179,1.64635175585495,1.57841826862706,1.90125759384206,1.12228454331548,0.949080144993393,0.788035859004508,1.22769312950907,1.39443157067369,0.964533054905707,0.499621155875892,0.467863216890817,1.28922632428979,4.59091996965224,1.76473135295612,1.39120701372253|short_description=p3@Trim54}} | ||
|EntrezGene=58522 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|UniProt=Q9ERP3 | |||
|association_with_transcript=0bp_to_ENSMUST00000013771_5end | |||
|description=CAGE_peak_3_at_Trim54_5end | |||
|id=chr5:31419075..31419086,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!5.56e-07!5;UBERON:0002472!5.56e-07!5;UBERON:0008784!5.56e-07!5;UBERON:0006058!5.56e-07!5;UBERON:0004709!5.56e-07!5;UBERON:0005420!5.56e-07!5;UBERON:0006057!5.56e-07!5;UBERON:0000978!5.56e-07!5;UBERON:0002103!5.56e-07!5;UBERON:0000376!5.56e-07!5;UBERON:0000154!5.56e-07!5;UBERON:0005730!5.56e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.79e-09,5;UBERON:0002472,7.79e-09,5;UBERON:0008784,7.79e-09,5;UBERON:0006058,7.79e-09,5;UBERON:0004709,7.79e-09,5;UBERON:0002529,7.79e-09,5;UBERON:0010538,7.79e-09,5;UBERON:0005420,7.79e-09,5;UBERON:0010758,7.79e-09,5;UBERON:0000978,7.79e-09,5;UBERON:0002103,7.79e-09,5;UBERON:0000376,7.79e-09,5;UBERON:0000154,7.79e-09,5;UBERON:0010709,7.79e-09,5;UBERON:0005730,7.79e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46044332606059,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,1.61766849947409,3.3126227769059,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11017426525233,0,1.05220927943237,0,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0.468508622798644,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0.469052119962192,0,0,0,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0.820837320395476,3.32382119138008,3.36259971078264,3.29325172936576,11.9443712696731,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.983179888294428,0.690739927463582,0,0,0,0,0,0,0,0,19.6927323219411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,2.4732937941222,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,2.88030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,8.38902419376282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,2.00022055021454,1.23621034343337,0.962757628775446,2.02157769411038,1.2673964994512,0.943131706930381,1.03005658216871,1.15245274328765,0.861532034334199,0.476293691283074,1.15884325944855,0.77163688185482,1.23625770240992,1.61918812147837,0.342869252385415,0.354951612318675,0.953744759789284,1.0174249164263,1.41164070622996,1.09998990259179,1.64635175585495,1.57841826862706,1.90125759384206,1.12228454331548,0.949080144993393,0.788035859004508,1.22769312950907,1.39443157067369,0.964533054905707,0.499621155875892,0.467863216890817,1.28922632428979,4.59091996965224,1.76473135295612,1.39120701372253 | |||
|short_description=p3@Trim54 | |||
}} |
Revision as of 07:25, 14 September 2013
Short description: | p3@Trim54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trim54_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000013771_5end |
EntrezGene: | Trim54 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 7.79e-09 | 5 |
stylopod | 7.79e-09 | 5 |
lower limb segment | 7.79e-09 | 5 |
multi-limb segment region | 7.79e-09 | 5 |
pelvic appendage | 7.79e-09 | 5 |
limb segment | 7.79e-09 | 5 |
paired limb/fin segment | 7.79e-09 | 5 |
pelvic appendage bud | 7.79e-09 | 5 |
subdivision of organism along appendicular axis | 7.79e-09 | 5 |
leg | 7.79e-09 | 5 |
hindlimb | 7.79e-09 | 5 |
hindlimb stylopod | 7.79e-09 | 5 |
posterior region of body | 7.79e-09 | 5 |
pelvic complex | 7.79e-09 | 5 |
hindlimb/pelvic fin field | 7.79e-09 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.