FFCP PHASE1:Mm9::chr5:67486110..67486118,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:67486110..67486118,-|id=chr5:67486110..67486118,-|ontology_enrichment_celltype=CL:0000107!1.32e-31!9;CL:0000540!3.31e-09!33;CL:0000047!3.31e-09!33;CL:0000031!3.31e-09!33;CL:0000404!3.31e-09!33;CL:0000393!1.66e-07!39;CL:0000211!1.66e-07!39|ontology_enrichment_celltype_v019_2=CL:0000107,2.30e-78,9;CL:0000540,3.20e-21,33;CL:0000047,3.20e-21,33;CL:0000031,3.20e-21,33;CL:0000404,3.20e-21,33;CL:0000393,6.67e-18,39;CL:0000211,6.67e-18,39;CL:0002319,3.35e-16,43;CL:0000221,7.99e-16,44;CL:0000133,7.99e-16,44;CL:0002321,9.06e-10,70;CL:0002679,1.03e-09,1;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.32e-31!9;UBERON:0000010!1.40e-25!11;UBERON:0002342!2.53e-16!10;UBERON:0005062!2.53e-16!10;UBERON:0000013!8.99e-12!3;UBERON:0002005!9.74e-12!3;UBERON:0005428!9.74e-12!3;UBERON:0000011!2.73e-11!3;UBERON:0002369!8.22e-08!7;UBERON:0006858!8.22e-08!7|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.30e-78,9;UBERON:0000010,4.15e-64,11;UBERON:0000013,1.68e-27,3;UBERON:0010313,2.06e-27,3;UBERON:0002342,2.06e-27,3;UBERON:0002005,2.06e-27,3;UBERON:0005428,2.06e-27,3;UBERON:0005062,2.06e-27,3;UBERON:0000011,2.86e-26,3;UBERON:0001017,2.40e-09,73;UBERON:0001016,4.41e-09,75;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20321370482267,5.85658116444958,8.18608911384636,3.58453196928828,4.45597348164788,1.41538265394416,6.8817819284732,8.76767573733936,7.11518000303742,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:67486110..67486118,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:67486110..67486118,- | |||
|id=chr5:67486110..67486118,- | |||
|ontology_enrichment_celltype=CL:0000107!1.32e-31!9;CL:0000540!3.31e-09!33;CL:0000047!3.31e-09!33;CL:0000031!3.31e-09!33;CL:0000404!3.31e-09!33;CL:0000393!1.66e-07!39;CL:0000211!1.66e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.30e-78,9;CL:0000540,3.20e-21,33;CL:0000047,3.20e-21,33;CL:0000031,3.20e-21,33;CL:0000404,3.20e-21,33;CL:0000393,6.67e-18,39;CL:0000211,6.67e-18,39;CL:0002319,3.35e-16,43;CL:0000221,7.99e-16,44;CL:0000133,7.99e-16,44;CL:0002321,9.06e-10,70;CL:0002679,1.03e-09,1;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.32e-31!9;UBERON:0000010!1.40e-25!11;UBERON:0002342!2.53e-16!10;UBERON:0005062!2.53e-16!10;UBERON:0000013!8.99e-12!3;UBERON:0002005!9.74e-12!3;UBERON:0005428!9.74e-12!3;UBERON:0000011!2.73e-11!3;UBERON:0002369!8.22e-08!7;UBERON:0006858!8.22e-08!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.30e-78,9;UBERON:0000010,4.15e-64,11;UBERON:0000013,1.68e-27,3;UBERON:0010313,2.06e-27,3;UBERON:0002342,2.06e-27,3;UBERON:0002005,2.06e-27,3;UBERON:0005428,2.06e-27,3;UBERON:0005062,2.06e-27,3;UBERON:0000011,2.86e-26,3;UBERON:0001017,2.40e-09,73;UBERON:0001016,4.41e-09,75;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20321370482267,5.85658116444958,8.18608911384636,3.58453196928828,4.45597348164788,1.41538265394416,6.8817819284732,8.76767573733936,7.11518000303742,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:67486110..67486118,- | |||
}} |
Revision as of 07:55, 14 September 2013
Short description: | p@chr5:67486110..67486118, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:67486110..67486118, - |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.30e-78 | 9 |
neuron | 3.20e-21 | 33 |
neuronal stem cell | 3.20e-21 | 33 |
neuroblast | 3.20e-21 | 33 |
electrically signaling cell | 3.20e-21 | 33 |
electrically responsive cell | 6.67e-18 | 39 |
electrically active cell | 6.67e-18 | 39 |
neural cell | 3.35e-16 | 43 |
ectodermal cell | 7.99e-16 | 44 |
neurectodermal cell | 7.99e-16 | 44 |
embryonic cell | 9.06e-10 | 70 |
natural helper lymphocyte | 1.03e-09 | 1 |
somatic stem cell | 3.57e-09 | 91 |
multi fate stem cell | 3.57e-09 | 91 |
stem cell | 1.44e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.30e-78 | 9 |
peripheral nervous system | 4.15e-64 | 11 |
sympathetic nervous system | 1.68e-27 | 3 |
neural crest-derived structure | 2.06e-27 | 3 |
neural crest | 2.06e-27 | 3 |
enteric nervous system | 2.06e-27 | 3 |
vagal neural crest | 2.06e-27 | 3 |
neural fold | 2.06e-27 | 3 |
parasympathetic nervous system | 2.86e-26 | 3 |
central nervous system | 2.40e-09 | 73 |
nervous system | 4.41e-09 | 75 |
ectoderm-derived structure | 4.82e-07 | 95 |
ectoderm | 4.82e-07 | 95 |
presumptive ectoderm | 4.82e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.