FFCP PHASE1:Mm9::chr6:122805870..122805874,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:122805870..122805874,-|id=chr6:122805870..122805874,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,1.75e-43,3;CL:0002540,1.75e-43,3;CL:0002194,1.23e-33,4;CL:0000766,1.23e-33,4;CL:0000234,1.23e-33,4;CL:0000576,1.23e-33,4;CL:0000235,1.23e-33,4;CL:0000864,1.23e-33,4;CL:0002009,1.23e-33,4;CL:0000040,1.23e-33,4;CL:0000559,1.23e-33,4;CL:0002476,1.73e-30,2;CL:0000473,1.27e-19,7;CL:0000557,1.27e-19,7;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000839,6.16e-11,13;CL:0000219,4.19e-10,54;CL:0000763,5.07e-09,16;CL:0000878,1.53e-08,2;CL:0000129,1.53e-08,2;CL:0000738,1.57e-08,17;CL:0002087,1.57e-08,17;CL:0000049,1.05e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-33,16;UBERON:0001474,3.96e-24,22;UBERON:0004765,3.96e-24,22;UBERON:0001434,3.96e-24,22;UBERON:0002204,9.31e-17,32;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0002384,8.56e-12,46;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,2.2497492932035,3.9554654502679,1.4209602298922,2.39680088414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0,0,0,0,0.438599962275997,0.658650345873152,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0.126473074248515,0,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.578596234326046,7.53956419696361,22.3001330365671,0.491764273019036,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0|short_description=p@chr6:122805870..122805874,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:122805870..122805874,- | |||
|id=chr6:122805870..122805874,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.75e-43,3;CL:0002540,1.75e-43,3;CL:0002194,1.23e-33,4;CL:0000766,1.23e-33,4;CL:0000234,1.23e-33,4;CL:0000576,1.23e-33,4;CL:0000235,1.23e-33,4;CL:0000864,1.23e-33,4;CL:0002009,1.23e-33,4;CL:0000040,1.23e-33,4;CL:0000559,1.23e-33,4;CL:0002476,1.73e-30,2;CL:0000473,1.27e-19,7;CL:0000557,1.27e-19,7;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000839,6.16e-11,13;CL:0000219,4.19e-10,54;CL:0000763,5.07e-09,16;CL:0000878,1.53e-08,2;CL:0000129,1.53e-08,2;CL:0000738,1.57e-08,17;CL:0002087,1.57e-08,17;CL:0000049,1.05e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-33,16;UBERON:0001474,3.96e-24,22;UBERON:0004765,3.96e-24,22;UBERON:0001434,3.96e-24,22;UBERON:0002204,9.31e-17,32;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0002384,8.56e-12,46;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,2.2497492932035,3.9554654502679,1.4209602298922,2.39680088414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0,0,0,0,0.438599962275997,0.658650345873152,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0.126473074248515,0,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.578596234326046,7.53956419696361,22.3001330365671,0.491764273019036,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr6:122805870..122805874,- | |||
}} |
Revision as of 08:47, 14 September 2013
Short description: | p@chr6:122805870..122805874, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:122805870..122805874, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.75e-43 | 3 |
mesenchymal stem cell of the bone marrow | 1.75e-43 | 3 |
monopoietic cell | 1.23e-33 | 4 |
myeloid leukocyte | 1.23e-33 | 4 |
phagocyte | 1.23e-33 | 4 |
monocyte | 1.23e-33 | 4 |
macrophage | 1.23e-33 | 4 |
tissue-resident macrophage | 1.23e-33 | 4 |
macrophage dendritic cell progenitor | 1.23e-33 | 4 |
monoblast | 1.23e-33 | 4 |
promonocyte | 1.23e-33 | 4 |
bone marrow macrophage | 1.73e-30 | 2 |
defensive cell | 1.27e-19 | 7 |
granulocyte monocyte progenitor cell | 1.27e-19 | 7 |
connective tissue cell | 8.56e-12 | 46 |
mesenchymal cell | 8.56e-12 | 46 |
myeloid lineage restricted progenitor cell | 6.16e-11 | 13 |
motile cell | 4.19e-10 | 54 |
myeloid cell | 5.07e-09 | 16 |
central nervous system macrophage | 1.53e-08 | 2 |
microglial cell | 1.53e-08 | 2 |
leukocyte | 1.57e-08 | 17 |
nongranular leukocyte | 1.57e-08 | 17 |
common myeloid progenitor | 1.05e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.06e-33 | 16 |
bone element | 3.96e-24 | 22 |
skeletal element | 3.96e-24 | 22 |
skeletal system | 3.96e-24 | 22 |
musculoskeletal system | 9.31e-17 | 32 |
hematopoietic system | 4.78e-12 | 45 |
blood island | 4.78e-12 | 45 |
connective tissue | 8.56e-12 | 46 |
hemolymphoid system | 2.55e-11 | 48 |
immune system | 2.55e-11 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.