FFCP PHASE1:Mm9::chr6:124668855..124668875,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=849|UniProt=|association_with_transcript=-6bp_to_ENSMUST00000143765_5end|description=CAGE_peak_1_at_ENSMUST00000143765_5end|id=chr6:124668855..124668875,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.38e-07,9;CL:0002251,3.38e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.29e-24!43;UBERON:0005409!8.86e-24!59;UBERON:0004119!2.74e-19!130;UBERON:0000925!2.74e-19!130;UBERON:0006595!2.74e-19!130;UBERON:0001007!6.55e-19!128;UBERON:0001555!6.55e-19!128;UBERON:0007026!6.55e-19!128;UBERON:0004921!1.35e-17!126;UBERON:0004185!1.35e-17!126;UBERON:0002108!1.16e-10!16;UBERON:0000344!1.53e-10!15;UBERON:0001242!4.47e-09!13;UBERON:0000060!4.47e-09!13;UBERON:0001262!4.47e-09!13;UBERON:0004786!4.47e-09!13;UBERON:0001045!5.29e-08!13;UBERON:0001264!6.61e-08!12;UBERON:0003922!6.61e-08!12;UBERON:0002114!6.61e-08!12;UBERON:0003923!6.61e-08!12;UBERON:0003924!6.61e-08!12;UBERON:0003921!6.61e-08!12;UBERON:0000485!8.11e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.24e-18,31;UBERON:0005409,8.42e-18,47;UBERON:0000344,2.51e-12,15;UBERON:0001242,1.43e-10,13;UBERON:0001262,1.43e-10,13;UBERON:0004786,1.43e-10,13;UBERON:0004119,2.12e-10,118;UBERON:0000925,2.12e-10,118;UBERON:0006595,2.12e-10,118;UBERON:0001007,2.54e-10,116;UBERON:0001555,2.54e-10,116;UBERON:0007026,2.54e-10,116;UBERON:0004921,2.99e-09,114;UBERON:0001264,3.59e-09,12;UBERON:0000485,7.22e-08,11;UBERON:0004923,3.04e-07,24;UBERON:0003350,3.38e-07,9;UBERON:0004808,3.38e-07,9;UBERON:0001277,3.38e-07,9|phase1_expression=1.76163731815273,11.5161884520989,12.2849794635175,20.2651021575576,12.0214975187123,6.04365378882803,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,11.1994695955385,10.3234176480227,8.03924749761028,8.18447792702242,5.60225204983311,7.79096019771133,8.56902441183765,21.9513205548752,0,0,0,2.88851619751275,2.65975432573588,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,5.0703631119605,0,0,0,2.81438353314578,7.09407623330276,5.56076889516262,2.05530983494308,0,0,0.173485326766136,0,0,0,0,0,2.96633961281249,0,0,0,0,0,1.86391761218122,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0.203678727700633,4.10543003013307,8.33985102831127,1.47309299120532,0.260240885925407,0,0,0.452114453507145,0.136072998302656,0,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,2.43776516565517,1.85203922767149,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,17.5121954981413,10.3135720998782,0.426576501070468,0.928946687441754,3.22168653305233,4.23535401709019,8.45036566610507,5.32631753115166,8.0669940462567,4.28217282282428,6.53471542880701,4.77495532898762,3.70431765526328,6.29173586057955,8.64552199498777,6.17337947088538,0.379335801906163,0.799739588268102,0,1.62921062276251,0.969762435838129,0.280543279561274,1.13825766823663,0.295220295959204,1.56998727841375,0.616985819609003,0,0,0,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,2.03228509183265,1.32643988239339,0.977789858652155,2.20668611507745,3.28566347603903,3.1826188913945,0.952174563544055,3.51240566144038,2.36452716159286,1.32878813789265,2.07291199254733,2.94953966488328,2.93564469172023,2.74833211304872,0,0,1.47529281905711,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.712262414669021,0.81443479676788,2.47455184458803,9.2921596837974,5.58395463156457,3.93020624054176,6.22396763194464,10.335566250827,5.53383266299069,5.42699415653264,9.81541069589265,3.56497378384721,5.68866164284469,4.21674434299995,7.21948802737308,10.2131881726136,1.62054984628179,5.04498866752743,3.42939256050548,4.25616560741457,4.10248280484762,6.91105886528908,5.48036908406279,0.23467170806371,3.1774810629573,11.9085334949679,4.122156323537,2.58343082713449,2.11095237248546,4.17803204010978,2.46211349617592,9.61886760878507,0,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,0.632671987162271,3.45643094115643,3.24016022465404,4.18176592028937,7.42432716737004,4.5853877770839,2.97552440611209,6.54389854960074,9.72112299688447,3.72803587852155,0,0,0,0,0,0,0,0.2604087696879,0,0,0.288030006257865,0.316011120628178,2.43270258348197,2.36235201479103,1.03936658382236,0.716106782669926,0.993406773906324,0.360586348559907,1.18151621739662,0.504832249740738,0.381034033274999,0.504130925684203,0.38983152295901,0.481059208201647,0.233753804363138,2.0405734525369,0,0,0,3.86379188064381,3.94133198447482,4.02933573387983,4.93047271881851,7.52358156053045,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,1.45864030240976,0.209613162627982,0.367687016900028,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,2.02783439912192,1.88626341386076,1.96647165686753,1.34452820050225,1.37845125493472,0,0.579421629724277,1.54327376370964,0.824171801606613,1.17759136107518,2.05721551431249,1.24233064311536,1.1921809497366,1.74415699958794,0.752875043322645,1.69229215783353,1.28049581010941,1.31534855718921,1.62964936615034,2.24456908663095,1.06771516311757,1.47756723563345,1.22769312950907,2.16911577660352,1.15743966588685,0.499621155875892,0.701794825336225,0.429742108096597,0,0.441182838239031,0.231867835620421|short_description=p1@ENSMUST00000143765}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=849 | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENSMUST00000143765_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000143765_5end | |||
|id=chr6:124668855..124668875,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.38e-07,9;CL:0002251,3.38e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.29e-24!43;UBERON:0005409!8.86e-24!59;UBERON:0004119!2.74e-19!130;UBERON:0000925!2.74e-19!130;UBERON:0006595!2.74e-19!130;UBERON:0001007!6.55e-19!128;UBERON:0001555!6.55e-19!128;UBERON:0007026!6.55e-19!128;UBERON:0004921!1.35e-17!126;UBERON:0004185!1.35e-17!126;UBERON:0002108!1.16e-10!16;UBERON:0000344!1.53e-10!15;UBERON:0001242!4.47e-09!13;UBERON:0000060!4.47e-09!13;UBERON:0001262!4.47e-09!13;UBERON:0004786!4.47e-09!13;UBERON:0001045!5.29e-08!13;UBERON:0001264!6.61e-08!12;UBERON:0003922!6.61e-08!12;UBERON:0002114!6.61e-08!12;UBERON:0003923!6.61e-08!12;UBERON:0003924!6.61e-08!12;UBERON:0003921!6.61e-08!12;UBERON:0000485!8.11e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.24e-18,31;UBERON:0005409,8.42e-18,47;UBERON:0000344,2.51e-12,15;UBERON:0001242,1.43e-10,13;UBERON:0001262,1.43e-10,13;UBERON:0004786,1.43e-10,13;UBERON:0004119,2.12e-10,118;UBERON:0000925,2.12e-10,118;UBERON:0006595,2.12e-10,118;UBERON:0001007,2.54e-10,116;UBERON:0001555,2.54e-10,116;UBERON:0007026,2.54e-10,116;UBERON:0004921,2.99e-09,114;UBERON:0001264,3.59e-09,12;UBERON:0000485,7.22e-08,11;UBERON:0004923,3.04e-07,24;UBERON:0003350,3.38e-07,9;UBERON:0004808,3.38e-07,9;UBERON:0001277,3.38e-07,9 | |||
|phase1_expression=1.76163731815273,11.5161884520989,12.2849794635175,20.2651021575576,12.0214975187123,6.04365378882803,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,11.1994695955385,10.3234176480227,8.03924749761028,8.18447792702242,5.60225204983311,7.79096019771133,8.56902441183765,21.9513205548752,0,0,0,2.88851619751275,2.65975432573588,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,5.0703631119605,0,0,0,2.81438353314578,7.09407623330276,5.56076889516262,2.05530983494308,0,0,0.173485326766136,0,0,0,0,0,2.96633961281249,0,0,0,0,0,1.86391761218122,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0.203678727700633,4.10543003013307,8.33985102831127,1.47309299120532,0.260240885925407,0,0,0.452114453507145,0.136072998302656,0,0.374806898238915,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,2.43776516565517,1.85203922767149,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,17.5121954981413,10.3135720998782,0.426576501070468,0.928946687441754,3.22168653305233,4.23535401709019,8.45036566610507,5.32631753115166,8.0669940462567,4.28217282282428,6.53471542880701,4.77495532898762,3.70431765526328,6.29173586057955,8.64552199498777,6.17337947088538,0.379335801906163,0.799739588268102,0,1.62921062276251,0.969762435838129,0.280543279561274,1.13825766823663,0.295220295959204,1.56998727841375,0.616985819609003,0,0,0,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,2.03228509183265,1.32643988239339,0.977789858652155,2.20668611507745,3.28566347603903,3.1826188913945,0.952174563544055,3.51240566144038,2.36452716159286,1.32878813789265,2.07291199254733,2.94953966488328,2.93564469172023,2.74833211304872,0,0,1.47529281905711,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.712262414669021,0.81443479676788,2.47455184458803,9.2921596837974,5.58395463156457,3.93020624054176,6.22396763194464,10.335566250827,5.53383266299069,5.42699415653264,9.81541069589265,3.56497378384721,5.68866164284469,4.21674434299995,7.21948802737308,10.2131881726136,1.62054984628179,5.04498866752743,3.42939256050548,4.25616560741457,4.10248280484762,6.91105886528908,5.48036908406279,0.23467170806371,3.1774810629573,11.9085334949679,4.122156323537,2.58343082713449,2.11095237248546,4.17803204010978,2.46211349617592,9.61886760878507,0,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,0.632671987162271,3.45643094115643,3.24016022465404,4.18176592028937,7.42432716737004,4.5853877770839,2.97552440611209,6.54389854960074,9.72112299688447,3.72803587852155,0,0,0,0,0,0,0,0.2604087696879,0,0,0.288030006257865,0.316011120628178,2.43270258348197,2.36235201479103,1.03936658382236,0.716106782669926,0.993406773906324,0.360586348559907,1.18151621739662,0.504832249740738,0.381034033274999,0.504130925684203,0.38983152295901,0.481059208201647,0.233753804363138,2.0405734525369,0,0,0,3.86379188064381,3.94133198447482,4.02933573387983,4.93047271881851,7.52358156053045,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,1.45864030240976,0.209613162627982,0.367687016900028,1.77797382241292,1.64828045791115,1.28367683836726,1.26348605881899,2.02783439912192,1.88626341386076,1.96647165686753,1.34452820050225,1.37845125493472,0,0.579421629724277,1.54327376370964,0.824171801606613,1.17759136107518,2.05721551431249,1.24233064311536,1.1921809497366,1.74415699958794,0.752875043322645,1.69229215783353,1.28049581010941,1.31534855718921,1.62964936615034,2.24456908663095,1.06771516311757,1.47756723563345,1.22769312950907,2.16911577660352,1.15743966588685,0.499621155875892,0.701794825336225,0.429742108096597,0,0.441182838239031,0.231867835620421 | |||
|short_description=p1@ENSMUST00000143765 | |||
}} |
Revision as of 08:49, 14 September 2013
Short description: | p1@ENSMUST00000143765 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000143765_5end |
Coexpression cluster: | MCL_coexpression_mm9:849 |
Association with transcript: | -6bp_to_ENSMUST00000143765_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.38e-07 | 9 |
epithelial cell of alimentary canal | 3.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.24e-18 | 31 |
gastrointestinal system | 8.42e-18 | 47 |
mucosa | 2.51e-12 | 15 |
intestinal mucosa | 1.43e-10 | 13 |
wall of intestine | 1.43e-10 | 13 |
gastrointestinal system mucosa | 1.43e-10 | 13 |
endoderm-derived structure | 2.12e-10 | 118 |
endoderm | 2.12e-10 | 118 |
presumptive endoderm | 2.12e-10 | 118 |
digestive system | 2.54e-10 | 116 |
digestive tract | 2.54e-10 | 116 |
primitive gut | 2.54e-10 | 116 |
subdivision of digestive tract | 2.99e-09 | 114 |
pancreas | 3.59e-09 | 12 |
simple columnar epithelium | 7.22e-08 | 11 |
organ component layer | 3.04e-07 | 24 |
epithelium of mucosa | 3.38e-07 | 9 |
gastrointestinal system epithelium | 3.38e-07 | 9 |
intestinal epithelium | 3.38e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.