FFCP PHASE1:Mm9::chr6:141223848..141223861,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1472|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:141223848..141223861,+|id=chr6:141223848..141223861,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.83e-10!18;UBERON:0000948!2.83e-10!18;UBERON:0005498!2.83e-10!18;UBERON:0004140!2.83e-10!18;UBERON:0009881!2.83e-10!18;UBERON:0004141!2.83e-10!18;UBERON:0003084!2.83e-10!18;UBERON:0007005!2.83e-10!18;UBERON:0004139!2.83e-10!18;UBERON:0004291!2.83e-10!18;UBERON:0004872!6.85e-09!33;UBERON:0004535!1.75e-07!23;UBERON:0001009!1.75e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003103,9.92e-12,43;UBERON:0007100,5.48e-11,18;UBERON:0000948,5.48e-11,18;UBERON:0005498,5.48e-11,18;UBERON:0004140,5.48e-11,18;UBERON:0009881,5.48e-11,18;UBERON:0004141,5.48e-11,18;UBERON:0003084,5.48e-11,18;UBERON:0007005,5.48e-11,18;UBERON:0004139,5.48e-11,18;UBERON:0004291,5.48e-11,18;UBERON:0004535,4.50e-08,23;UBERON:0001009,4.50e-08,23;UBERON:0002113,1.45e-07,14;UBERON:0003918,1.45e-07,14;UBERON:0011143,1.45e-07,14;UBERON:0005095,1.45e-07,14;UBERON:0007687,1.45e-07,14;UBERON:0002048,8.67e-07,14;UBERON:0000117,8.67e-07,14;UBERON:0000171,8.67e-07,14;UBERON:0000170,8.67e-07,14;UBERON:0005597,8.67e-07,14;UBERON:0000118,8.67e-07,14|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.304465478312141,0,0.301445281105245,1.05829836422134,0,0.494389935468748,0.144599356919912,0,0.970601099684455,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,2.34230536855727,0,0,0.210441855886474,0.520481771850815,0,0.360124259610698,0.60281927134286,0.340182495756639,1.2811372028485,0.562210347358373,1.55222022443409,0.431135985865684,0.189106080167819,0,0.219195732427575,1.11218899690239,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0.473489471170421,0.787056926989615,3.85667782218446,3.72054311600653,1.3413670069981,1.63471479314037,2.79751744852917,6.40253109908471,1.21603214318784,0.730999937126662,1.53685080703735,1.47627060636409,0,0,0.330418782983798,0.264450566663544,1.06644125267617,4.18026009348789,0.77320476793256,0.201683524623343,0.667134131534611,0.570676878337677,0.949058123089023,1.15289268306808,3.01602250560323,0.795825888164603,1.55971269695296,2.69645822596266,1.08069024937347,0.398282546508734,0,1.37098215131675,0,1.01825663922657,3.10323979468201,3.36651935473529,1.89709611372772,1.47610147979602,1.09899109488962,0.493588655687202,0,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,3.31727201358258,1.7339865851681,6.42247599981447,5.10255259703959,5.40748938561935,3.62638461918381,1.59113964439663,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0,0,0,0,0.584511715822624,1.18586333383957,0,0.141940085208269,0.178065603667255,1.46598263418218,0.989820737835213,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,0,0,0.412773735926445,0.740778109478847,0.376736914009382,0.683471138605126,0.457556346413045,0,0,0,0,0.158167996790568,0.203319467126849,1.40406943068342,2.71814784818809,2.40198820120795,2.15782954215713,0.743881101528023,0,1.16653475962614,0,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.651021924219751,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0.453142408984205,0,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.320125762024346,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0.441182838239031,0.463735671240843|short_description=p@chr6:141223848..141223861,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1472 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:141223848..141223861,+ | |||
|id=chr6:141223848..141223861,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.83e-10!18;UBERON:0000948!2.83e-10!18;UBERON:0005498!2.83e-10!18;UBERON:0004140!2.83e-10!18;UBERON:0009881!2.83e-10!18;UBERON:0004141!2.83e-10!18;UBERON:0003084!2.83e-10!18;UBERON:0007005!2.83e-10!18;UBERON:0004139!2.83e-10!18;UBERON:0004291!2.83e-10!18;UBERON:0004872!6.85e-09!33;UBERON:0004535!1.75e-07!23;UBERON:0001009!1.75e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,9.92e-12,43;UBERON:0007100,5.48e-11,18;UBERON:0000948,5.48e-11,18;UBERON:0005498,5.48e-11,18;UBERON:0004140,5.48e-11,18;UBERON:0009881,5.48e-11,18;UBERON:0004141,5.48e-11,18;UBERON:0003084,5.48e-11,18;UBERON:0007005,5.48e-11,18;UBERON:0004139,5.48e-11,18;UBERON:0004291,5.48e-11,18;UBERON:0004535,4.50e-08,23;UBERON:0001009,4.50e-08,23;UBERON:0002113,1.45e-07,14;UBERON:0003918,1.45e-07,14;UBERON:0011143,1.45e-07,14;UBERON:0005095,1.45e-07,14;UBERON:0007687,1.45e-07,14;UBERON:0002048,8.67e-07,14;UBERON:0000117,8.67e-07,14;UBERON:0000171,8.67e-07,14;UBERON:0000170,8.67e-07,14;UBERON:0005597,8.67e-07,14;UBERON:0000118,8.67e-07,14 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.304465478312141,0,0.301445281105245,1.05829836422134,0,0.494389935468748,0.144599356919912,0,0.970601099684455,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,2.34230536855727,0,0,0.210441855886474,0.520481771850815,0,0.360124259610698,0.60281927134286,0.340182495756639,1.2811372028485,0.562210347358373,1.55222022443409,0.431135985865684,0.189106080167819,0,0.219195732427575,1.11218899690239,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0.473489471170421,0.787056926989615,3.85667782218446,3.72054311600653,1.3413670069981,1.63471479314037,2.79751744852917,6.40253109908471,1.21603214318784,0.730999937126662,1.53685080703735,1.47627060636409,0,0,0.330418782983798,0.264450566663544,1.06644125267617,4.18026009348789,0.77320476793256,0.201683524623343,0.667134131534611,0.570676878337677,0.949058123089023,1.15289268306808,3.01602250560323,0.795825888164603,1.55971269695296,2.69645822596266,1.08069024937347,0.398282546508734,0,1.37098215131675,0,1.01825663922657,3.10323979468201,3.36651935473529,1.89709611372772,1.47610147979602,1.09899109488962,0.493588655687202,0,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,3.31727201358258,1.7339865851681,6.42247599981447,5.10255259703959,5.40748938561935,3.62638461918381,1.59113964439663,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0,0,0,0,0.584511715822624,1.18586333383957,0,0.141940085208269,0.178065603667255,1.46598263418218,0.989820737835213,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,0,0,0.412773735926445,0.740778109478847,0.376736914009382,0.683471138605126,0.457556346413045,0,0,0,0,0.158167996790568,0.203319467126849,1.40406943068342,2.71814784818809,2.40198820120795,2.15782954215713,0.743881101528023,0,1.16653475962614,0,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.651021924219751,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0.453142408984205,0,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.320125762024346,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.237270036248348,0.591026894253381,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr6:141223848..141223861,+ | |||
}} |
Revision as of 09:16, 14 September 2013
Short description: | p@chr6:141223848..141223861, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:141223848..141223861, + |
Coexpression cluster: | MCL_coexpression_mm9:1472 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 9.92e-12 | 43 |
primary circulatory organ | 5.48e-11 | 18 |
heart | 5.48e-11 | 18 |
primitive heart tube | 5.48e-11 | 18 |
primary heart field | 5.48e-11 | 18 |
anterior lateral plate mesoderm | 5.48e-11 | 18 |
heart tube | 5.48e-11 | 18 |
heart primordium | 5.48e-11 | 18 |
cardiac mesoderm | 5.48e-11 | 18 |
cardiogenic plate | 5.48e-11 | 18 |
heart rudiment | 5.48e-11 | 18 |
cardiovascular system | 4.50e-08 | 23 |
circulatory system | 4.50e-08 | 23 |
kidney | 1.45e-07 | 14 |
kidney mesenchyme | 1.45e-07 | 14 |
upper urinary tract | 1.45e-07 | 14 |
kidney rudiment | 1.45e-07 | 14 |
kidney field | 1.45e-07 | 14 |
lung | 8.67e-07 | 14 |
respiratory tube | 8.67e-07 | 14 |
respiration organ | 8.67e-07 | 14 |
pair of lungs | 8.67e-07 | 14 |
lung primordium | 8.67e-07 | 14 |
lung bud | 8.67e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.