Personal tools

FFCP PHASE1:Mm9::chr7:31729038..31729054,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=84506|HGNC=|MCL_coexpression_id=779|UniProt=Q9EQ21,Q5M9M1|association_with_transcript=-2bp_to_ENSMUST00000062620,NM_032541,uc009ghf.1_5end|description=CAGE_peak_1_at_Hamp_5end|id=chr7:31729038..31729054,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.91e-10,5;CL:0000066,9.51e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!6.08e-19!23;UBERON:0009856!6.08e-19!23;UBERON:0002107!3.52e-18!22;UBERON:0007499!3.52e-18!22;UBERON:0006925!3.52e-18!22;UBERON:0009497!3.52e-18!22;UBERON:0000015!3.52e-18!22;UBERON:0002423!3.52e-18!22;UBERON:0006235!3.52e-18!22;UBERON:0008835!3.52e-18!22;UBERON:0003894!3.52e-18!22;UBERON:0004161!3.52e-18!22;UBERON:0008836!3.52e-18!22;UBERON:0002365!5.57e-15!25;UBERON:0002330!5.57e-15!25;UBERON:0005911!6.06e-13!69;UBERON:0003929!3.74e-12!55;UBERON:0000077!9.79e-11!97;UBERON:0001041!2.39e-10!92;UBERON:0003914!3.36e-10!47;UBERON:0004119!1.10e-09!130;UBERON:0000925!1.10e-09!130;UBERON:0006595!1.10e-09!130;UBERON:0005057!1.36e-09!51;UBERON:0002368!1.43e-09!60;UBERON:0000949!1.75e-09!72;UBERON:0001007!4.24e-09!128;UBERON:0001555!4.24e-09!128;UBERON:0007026!4.24e-09!128;UBERON:0000490!2.88e-08!66;UBERON:0004921!4.07e-08!126;UBERON:0004185!4.07e-08!126;UBERON:0002530!5.07e-08!65;UBERON:0005256!8.30e-08!47;UBERON:0009569!3.19e-07!66;UBERON:0005172!4.06e-07!49;UBERON:0005173!4.06e-07!49;UBERON:0002417!4.06e-07!49;UBERON:0000916!4.06e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0009854,8.24e-28,23;UBERON:0009856,8.24e-28,23;UBERON:0002107,2.14e-26,22;UBERON:0007499,2.14e-26,22;UBERON:0006925,2.14e-26,22;UBERON:0009497,2.14e-26,22;UBERON:0000015,2.14e-26,22;UBERON:0002423,2.14e-26,22;UBERON:0006235,2.14e-26,22;UBERON:0008835,2.14e-26,22;UBERON:0003894,2.14e-26,22;UBERON:0004161,2.14e-26,22;UBERON:0008836,2.14e-26,22;UBERON:0002365,1.29e-22,25;UBERON:0002330,1.29e-22,25;UBERON:0003914,7.47e-17,47;UBERON:0005911,8.03e-14,69;UBERON:0003929,1.71e-13,55;UBERON:0005256,1.13e-11,45;UBERON:0005172,2.60e-10,49;UBERON:0005173,2.60e-10,49;UBERON:0002417,2.60e-10,49;UBERON:0000916,2.60e-10,49;UBERON:0000490,3.08e-10,66;UBERON:0001007,4.78e-10,116;UBERON:0001555,4.78e-10,116;UBERON:0007026,4.78e-10,116;UBERON:0009569,5.59e-10,66;UBERON:0004119,9.71e-10,118;UBERON:0000925,9.71e-10,118;UBERON:0006595,9.71e-10,118;UBERON:0005177,4.60e-09,79;UBERON:0001041,7.54e-09,80;UBERON:0004921,1.39e-08,114;UBERON:0002368,2.00e-08,60;UBERON:0000949,8.94e-08,72;UBERON:0002530,2.14e-07,65;UBERON:0003104,2.46e-07,61;UBERON:0009142,2.46e-07,61;UBERON:0002100,3.26e-07,90|phase1_expression=0,4.18770489167233,5.91499011206397,0,0,2.01455126294268,14.4839837169226,0,0.84473233291,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.1996590257033,9.1763712426868,4.01962374880514,13.3536218809313,20.6852383378453,0,0,18.4036323843903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,265.010554110267,76.1567893752681,283.344175609854,230.020851776475,378.582719597249,52.2453242890117,0,0,0,0,0,0,0,0,0,0,183.493494708529,0.258937883647172,2.52351636410202,0,0,0,0.150722640552623,0.823120949949934,0.753999547978053,0.741584903203122,1.59059292611903,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.820837320395476,2.75633952455909,4.23979963533464,4.61055242111206,5.77087600669599,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,921.967670241033,0,0.196558995113203,0.224862112384854,1.62288097110802,0.964708639009667,4.32863948028414,8.63088412352432,107.657790578623,169.129830523858,24.4405951096503,15.6299198020771,4.36852742360385,199.537313578218,34.803098223251,178.986546425809,2.21703828199926,0,0,0,0,0,0.238043640886014,0,0.788175720530955,0,0.318909537314974,1.80249646187312,1.20879487306127,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,2.65490276679926,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,4.31565908431426,1.1571483801547,0.785267825952089,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.384847366561318,0.233753804363138,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0,0.44449345560323,0.618105171716683,0.320919209591815,1.76888048234658,0.25347929989024,0.754505365544305,0.842773567228942,0.192075457214608,0.516919220600519,0,0.115884325944855,0.192909220463705,0,0.147198920134397,1.71434626192708,0.70990322463735,0.238436189947321,0.581385666529314,0.470546902076653,0.25384382367503,0.182927972872773,0,0.679020569229309,0,0,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0,1.50409737833809,0,0,0|short_description=p1@Hamp}}
|EntrezGene=84506
|HGNC=
|MCL_coexpression_id=779
|UniProt=Q9EQ21,Q5M9M1
|association_with_transcript=-2bp_to_ENSMUST00000062620,NM_032541,uc009ghf.1_5end
|description=CAGE_peak_1_at_Hamp_5end
|id=chr7:31729038..31729054,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.91e-10,5;CL:0000066,9.51e-09,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!6.08e-19!23;UBERON:0009856!6.08e-19!23;UBERON:0002107!3.52e-18!22;UBERON:0007499!3.52e-18!22;UBERON:0006925!3.52e-18!22;UBERON:0009497!3.52e-18!22;UBERON:0000015!3.52e-18!22;UBERON:0002423!3.52e-18!22;UBERON:0006235!3.52e-18!22;UBERON:0008835!3.52e-18!22;UBERON:0003894!3.52e-18!22;UBERON:0004161!3.52e-18!22;UBERON:0008836!3.52e-18!22;UBERON:0002365!5.57e-15!25;UBERON:0002330!5.57e-15!25;UBERON:0005911!6.06e-13!69;UBERON:0003929!3.74e-12!55;UBERON:0000077!9.79e-11!97;UBERON:0001041!2.39e-10!92;UBERON:0003914!3.36e-10!47;UBERON:0004119!1.10e-09!130;UBERON:0000925!1.10e-09!130;UBERON:0006595!1.10e-09!130;UBERON:0005057!1.36e-09!51;UBERON:0002368!1.43e-09!60;UBERON:0000949!1.75e-09!72;UBERON:0001007!4.24e-09!128;UBERON:0001555!4.24e-09!128;UBERON:0007026!4.24e-09!128;UBERON:0000490!2.88e-08!66;UBERON:0004921!4.07e-08!126;UBERON:0004185!4.07e-08!126;UBERON:0002530!5.07e-08!65;UBERON:0005256!8.30e-08!47;UBERON:0009569!3.19e-07!66;UBERON:0005172!4.06e-07!49;UBERON:0005173!4.06e-07!49;UBERON:0002417!4.06e-07!49;UBERON:0000916!4.06e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0009854,8.24e-28,23;UBERON:0009856,8.24e-28,23;UBERON:0002107,2.14e-26,22;UBERON:0007499,2.14e-26,22;UBERON:0006925,2.14e-26,22;UBERON:0009497,2.14e-26,22;UBERON:0000015,2.14e-26,22;UBERON:0002423,2.14e-26,22;UBERON:0006235,2.14e-26,22;UBERON:0008835,2.14e-26,22;UBERON:0003894,2.14e-26,22;UBERON:0004161,2.14e-26,22;UBERON:0008836,2.14e-26,22;UBERON:0002365,1.29e-22,25;UBERON:0002330,1.29e-22,25;UBERON:0003914,7.47e-17,47;UBERON:0005911,8.03e-14,69;UBERON:0003929,1.71e-13,55;UBERON:0005256,1.13e-11,45;UBERON:0005172,2.60e-10,49;UBERON:0005173,2.60e-10,49;UBERON:0002417,2.60e-10,49;UBERON:0000916,2.60e-10,49;UBERON:0000490,3.08e-10,66;UBERON:0001007,4.78e-10,116;UBERON:0001555,4.78e-10,116;UBERON:0007026,4.78e-10,116;UBERON:0009569,5.59e-10,66;UBERON:0004119,9.71e-10,118;UBERON:0000925,9.71e-10,118;UBERON:0006595,9.71e-10,118;UBERON:0005177,4.60e-09,79;UBERON:0001041,7.54e-09,80;UBERON:0004921,1.39e-08,114;UBERON:0002368,2.00e-08,60;UBERON:0000949,8.94e-08,72;UBERON:0002530,2.14e-07,65;UBERON:0003104,2.46e-07,61;UBERON:0009142,2.46e-07,61;UBERON:0002100,3.26e-07,90
|phase1_expression=0,4.18770489167233,5.91499011206397,0,0,2.01455126294268,14.4839837169226,0,0.84473233291,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.1996590257033,9.1763712426868,4.01962374880514,13.3536218809313,20.6852383378453,0,0,18.4036323843903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,265.010554110267,76.1567893752681,283.344175609854,230.020851776475,378.582719597249,52.2453242890117,0,0,0,0,0,0,0,0,0,0,183.493494708529,0.258937883647172,2.52351636410202,0,0,0,0.150722640552623,0.823120949949934,0.753999547978053,0.741584903203122,1.59059292611903,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.820837320395476,2.75633952455909,4.23979963533464,4.61055242111206,5.77087600669599,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,921.967670241033,0,0.196558995113203,0.224862112384854,1.62288097110802,0.964708639009667,4.32863948028414,8.63088412352432,107.657790578623,169.129830523858,24.4405951096503,15.6299198020771,4.36852742360385,199.537313578218,34.803098223251,178.986546425809,2.21703828199926,0,0,0,0,0,0.238043640886014,0,0.788175720530955,0,0.318909537314974,1.80249646187312,1.20879487306127,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,2.65490276679926,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,4.31565908431426,1.1571483801547,0.785267825952089,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.384847366561318,0.233753804363138,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0,0.44449345560323,0.618105171716683,0.320919209591815,1.76888048234658,0.25347929989024,0.754505365544305,0.842773567228942,0.192075457214608,0.516919220600519,0,0.115884325944855,0.192909220463705,0,0.147198920134397,1.71434626192708,0.70990322463735,0.238436189947321,0.581385666529314,0.470546902076653,0.25384382367503,0.182927972872773,0,0.679020569229309,0,0,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0,1.50409737833809,0,0,0
|short_description=p1@Hamp
}}

Revision as of 13:17, 14 September 2013

Short description:p1@Hamp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hamp_5end
Coexpression cluster:MCL_coexpression_mm9:779
Association with transcript: -2bp_to_ENSMUST00000062620, NM_032541, uc009ghf.1_5end
EntrezGene:Hamp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hamp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.18
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I220.69
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7265.01
Mouse hepatocyte, donor1.CNhs13078.11714-123C476.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C8283.34
Mouse hepatocyte, donor6.CNhs13090.11822-124F4230.02
Mouse hepatocyte, donor8.CNhs13091.11824-124F6378.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A752.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6183.49
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B2921.97
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F4107.66
liver, neonate N03.CNhs11123.1345-25G2169.13
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H215.63
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A3199.54
liver, neonate N25.CNhs11198.1368-26H134.80
liver, neonate N30.CNhs11106.1382-42D1178.99
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte1.91e-105
epithelial cell9.51e-0925

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum8.24e-2823
sac8.24e-2823
liver2.14e-2622
epithelial sac2.14e-2622
digestive gland2.14e-2622
epithelium of foregut-midgut junction2.14e-2622
anatomical boundary2.14e-2622
hepatobiliary system2.14e-2622
foregut-midgut junction2.14e-2622
hepatic diverticulum2.14e-2622
liver primordium2.14e-2622
septum transversum2.14e-2622
liver bud2.14e-2622
exocrine gland1.29e-2225
exocrine system1.29e-2225
epithelial tube7.47e-1747
endo-epithelium8.03e-1469
gut epithelium1.71e-1355
trunk mesenchyme1.13e-1145
abdomen element2.60e-1049
abdominal segment element2.60e-1049
abdominal segment of trunk2.60e-1049
abdomen2.60e-1049
unilaminar epithelium3.08e-1066
digestive system4.78e-10116
digestive tract4.78e-10116
primitive gut4.78e-10116
subdivision of trunk5.59e-1066
endoderm-derived structure9.71e-10118
endoderm9.71e-10118
presumptive endoderm9.71e-10118
trunk region element4.60e-0979
foregut7.54e-0980
subdivision of digestive tract1.39e-08114
endocrine gland2.00e-0860
endocrine system8.94e-0872
gland2.14e-0765
mesenchyme2.46e-0761
entire embryonic mesenchyme2.46e-0761
trunk3.26e-0790







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:31729038..31729054,-&oldid=3048391"