FFCP PHASE1:Mm9::chr7:86986715..86986725,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:86986715..86986725,+|id=chr7:86986715..86986725,+|ontology_enrichment_celltype=CL:0000239!6.59e-07!6;CL:0000677!6.59e-07!6;CL:0000212!6.59e-07!6;CL:0000584!6.59e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,2.51e-15,6;CL:0000677,2.51e-15,6;CL:0000584,2.51e-15,6;CL:0000075,3.08e-13,7;CL:0002563,1.92e-10,9;CL:0002251,1.92e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.75e-18!15;UBERON:0000160!5.37e-16!43;UBERON:0001242!4.84e-14!13;UBERON:0000060!4.84e-14!13;UBERON:0001262!4.84e-14!13;UBERON:0004786!4.84e-14!13;UBERON:0005409!1.34e-11!59;UBERON:0004923!2.83e-10!24;UBERON:0000331!1.92e-08!3;UBERON:0002116!1.92e-08!3;UBERON:0001204!1.92e-08!3;UBERON:0001168!1.92e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.12e-29,3;UBERON:0002116,1.12e-29,3;UBERON:0001204,1.12e-29,3;UBERON:0001168,1.12e-29,3;UBERON:0001242,6.66e-27,13;UBERON:0001262,6.66e-27,13;UBERON:0004786,6.66e-27,13;UBERON:0000344,2.45e-23,15;UBERON:0002108,1.82e-22,4;UBERON:0000160,6.90e-20,31;UBERON:0004923,1.29e-14,24;UBERON:0005409,4.65e-13,47;UBERON:0003350,1.92e-10,9;UBERON:0004808,1.92e-10,9;UBERON:0001277,1.92e-10,9;UBERON:0000485,1.18e-08,11|phase1_expression=0,2.79180326111489,1.81999695755814,0,1.00179145989269,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.68822784320151,0.57423196411502,0,1.50829862880122,4.3705386474966,1.26015064879965,1.10865255327652,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.793351699990633,0,0,0,0,0,0,0.949058123089023,0.658795818896044,0.502670417600539,0,0,0,1.29682829924817,0.597423819763102,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr7:86986715..86986725,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:86986715..86986725,+ | |||
|id=chr7:86986715..86986725,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.59e-07!6;CL:0000677!6.59e-07!6;CL:0000212!6.59e-07!6;CL:0000584!6.59e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.51e-15,6;CL:0000677,2.51e-15,6;CL:0000584,2.51e-15,6;CL:0000075,3.08e-13,7;CL:0002563,1.92e-10,9;CL:0002251,1.92e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.75e-18!15;UBERON:0000160!5.37e-16!43;UBERON:0001242!4.84e-14!13;UBERON:0000060!4.84e-14!13;UBERON:0001262!4.84e-14!13;UBERON:0004786!4.84e-14!13;UBERON:0005409!1.34e-11!59;UBERON:0004923!2.83e-10!24;UBERON:0000331!1.92e-08!3;UBERON:0002116!1.92e-08!3;UBERON:0001204!1.92e-08!3;UBERON:0001168!1.92e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.12e-29,3;UBERON:0002116,1.12e-29,3;UBERON:0001204,1.12e-29,3;UBERON:0001168,1.12e-29,3;UBERON:0001242,6.66e-27,13;UBERON:0001262,6.66e-27,13;UBERON:0004786,6.66e-27,13;UBERON:0000344,2.45e-23,15;UBERON:0002108,1.82e-22,4;UBERON:0000160,6.90e-20,31;UBERON:0004923,1.29e-14,24;UBERON:0005409,4.65e-13,47;UBERON:0003350,1.92e-10,9;UBERON:0004808,1.92e-10,9;UBERON:0001277,1.92e-10,9;UBERON:0000485,1.18e-08,11 | |||
|phase1_expression=0,2.79180326111489,1.81999695755814,0,1.00179145989269,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.68822784320151,0.57423196411502,0,1.50829862880122,4.3705386474966,1.26015064879965,1.10865255327652,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.793351699990633,0,0,0,0,0,0,0.949058123089023,0.658795818896044,0.502670417600539,0,0,0,1.29682829924817,0.597423819763102,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:86986715..86986725,+ | |||
}} |
Revision as of 14:17, 14 September 2013
Short description: | p@chr7:86986715..86986725, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86986715..86986725, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.51e-15 | 6 |
gut absorptive cell | 2.51e-15 | 6 |
enterocyte | 2.51e-15 | 6 |
columnar/cuboidal epithelial cell | 3.08e-13 | 7 |
intestinal epithelial cell | 1.92e-10 | 9 |
epithelial cell of alimentary canal | 1.92e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 1.12e-29 | 3 |
ileum | 1.12e-29 | 3 |
mucosa of small intestine | 1.12e-29 | 3 |
wall of small intestine | 1.12e-29 | 3 |
intestinal mucosa | 6.66e-27 | 13 |
wall of intestine | 6.66e-27 | 13 |
gastrointestinal system mucosa | 6.66e-27 | 13 |
mucosa | 2.45e-23 | 15 |
small intestine | 1.82e-22 | 4 |
intestine | 6.90e-20 | 31 |
organ component layer | 1.29e-14 | 24 |
gastrointestinal system | 4.65e-13 | 47 |
epithelium of mucosa | 1.92e-10 | 9 |
gastrointestinal system epithelium | 1.92e-10 | 9 |
intestinal epithelium | 1.92e-10 | 9 |
simple columnar epithelium | 1.18e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.