FFCP PHASE1:Mm9::chr9:123541646..123541661,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22599|HGNC=|MCL_coexpression_id=11|UniProt=O88575,Q8VDB9|association_with_transcript=21bp_to_ENSMUST00000026273,NM_011731,uc009sgi.2,uc009sgj.2_5end|description=CAGE_peak_2_at_Slc6a20b_5end|id=chr9:123541646..123541661,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.58e-12!14;UBERON:0003918!1.58e-12!14;UBERON:0005095!1.58e-12!14;UBERON:0007687!1.58e-12!14;UBERON:0006554!8.83e-11!16;UBERON:0001008!4.63e-10!17;UBERON:0000344!4.76e-10!15;UBERON:0000160!4.03e-09!43;UBERON:0000489!7.17e-08!21;UBERON:0001242!6.24e-07!13;UBERON:0000060!6.24e-07!13;UBERON:0001262!6.24e-07!13;UBERON:0004786!6.24e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.96e-33,14;UBERON:0003918,3.96e-33,14;UBERON:0011143,3.96e-33,14;UBERON:0005095,3.96e-33,14;UBERON:0007687,3.96e-33,14;UBERON:0006554,1.13e-25,18;UBERON:0001008,2.68e-24,19;UBERON:0000489,6.11e-22,21;UBERON:0003103,2.01e-10,43;UBERON:0005172,4.56e-09,49;UBERON:0005173,4.56e-09,49;UBERON:0002417,4.56e-09,49;UBERON:0000916,4.56e-09,49;UBERON:0003104,3.80e-07,61;UBERON:0009142,3.80e-07,61|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,1.90023419456374,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0,0,0,0.898819408654221,0.216138049874694,0.995706366271836,0,0,1.1270773567308,1.01825663922657,1.93952487167626,1.96380295692892,8.22074982615345,12.251642282307,14.9148791449306,12.3397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p2@Slc6a20b}} | ||
|EntrezGene=22599 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=O88575,Q8VDB9 | |||
|association_with_transcript=21bp_to_ENSMUST00000026273,NM_011731,uc009sgi.2,uc009sgj.2_5end | |||
|description=CAGE_peak_2_at_Slc6a20b_5end | |||
|id=chr9:123541646..123541661,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.58e-12!14;UBERON:0003918!1.58e-12!14;UBERON:0005095!1.58e-12!14;UBERON:0007687!1.58e-12!14;UBERON:0006554!8.83e-11!16;UBERON:0001008!4.63e-10!17;UBERON:0000344!4.76e-10!15;UBERON:0000160!4.03e-09!43;UBERON:0000489!7.17e-08!21;UBERON:0001242!6.24e-07!13;UBERON:0000060!6.24e-07!13;UBERON:0001262!6.24e-07!13;UBERON:0004786!6.24e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.96e-33,14;UBERON:0003918,3.96e-33,14;UBERON:0011143,3.96e-33,14;UBERON:0005095,3.96e-33,14;UBERON:0007687,3.96e-33,14;UBERON:0006554,1.13e-25,18;UBERON:0001008,2.68e-24,19;UBERON:0000489,6.11e-22,21;UBERON:0003103,2.01e-10,43;UBERON:0005172,4.56e-09,49;UBERON:0005173,4.56e-09,49;UBERON:0002417,4.56e-09,49;UBERON:0000916,4.56e-09,49;UBERON:0003104,3.80e-07,61;UBERON:0009142,3.80e-07,61 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,1.90023419456374,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0,0,0,0.898819408654221,0.216138049874694,0.995706366271836,0,0,1.1270773567308,1.01825663922657,1.93952487167626,1.96380295692892,8.22074982615345,12.251642282307,14.9148791449306,12.3397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Slc6a20b | |||
}} |
Revision as of 17:17, 14 September 2013
Short description: | p2@Slc6a20b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc6a20b_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 21bp_to_ENSMUST00000026273, NM_011731, uc009sgi.2, uc009sgj.2_5end |
EntrezGene: | Slc6a20b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.96e-33 | 14 |
kidney mesenchyme | 3.96e-33 | 14 |
upper urinary tract | 3.96e-33 | 14 |
kidney rudiment | 3.96e-33 | 14 |
kidney field | 3.96e-33 | 14 |
urinary system structure | 1.13e-25 | 18 |
renal system | 2.68e-24 | 19 |
cavitated compound organ | 6.11e-22 | 21 |
compound organ | 2.01e-10 | 43 |
abdomen element | 4.56e-09 | 49 |
abdominal segment element | 4.56e-09 | 49 |
abdominal segment of trunk | 4.56e-09 | 49 |
abdomen | 4.56e-09 | 49 |
mesenchyme | 3.80e-07 | 61 |
entire embryonic mesenchyme | 3.80e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.