FFCP PHASE1:Hg19::chr1:168195229..168195294,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375035,9095 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25140,11596 | |||
|TSSclassifier=strong | |||
|UniProt=O95562,Q5TIH2 | |||
|association_with_transcript=0bp_to_ENST00000271375,ENST00000367825,NM_199344,uc001gfi.3,uc001gfj.3_5end | |||
|coexpression_cluster_id=C992 | |||
|description=CAGE_peak_1_at_SFT2D2_5end,CAGE_peak_1_at_TBX19_5end | |||
|id=chr1:168195229..168195294,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.72e-39!140;CL:0002087!3.75e-34!119;CL:0000037!4.33e-34!172;CL:0000566!4.33e-34!172;CL:0000988!3.70e-33!182;CL:0002031!9.44e-33!124;CL:0002032!4.21e-31!165;CL:0000837!4.21e-31!165;CL:0000134!3.26e-23!358;CL:0002009!6.16e-23!65;CL:0000766!1.08e-22!76;CL:0000557!3.63e-22!71;CL:0002320!6.70e-22!365;CL:0002194!1.13e-21!63;CL:0000576!1.13e-21!63;CL:0000040!1.13e-21!63;CL:0000559!1.13e-21!63;CL:0000219!2.17e-21!390;CL:0000839!1.79e-20!70;CL:0002057!1.62e-19!42;CL:0000763!4.28e-19!112;CL:0000049!4.28e-19!112;CL:0000860!8.71e-18!45;CL:0000063!1.54e-11!578;CL:0000048!3.10e-11!430;CL:0000542!3.15e-11!53;CL:0000051!3.15e-11!53;CL:0000838!5.27e-11!52;CL:0000723!5.46e-11!436;CL:0000034!2.67e-10!444;CL:0000003!1.13e-08!722;CL:0000236!1.36e-07!14;CL:0000084!1.91e-07!25;CL:0000827!1.91e-07!25;CL:0000451!2.27e-07!10;CL:0000791!3.33e-07!18;CL:0000789!3.33e-07!18;CL:0002420!3.33e-07!18;CL:0002419!3.33e-07!18;CL:0000790!3.33e-07!18;CL:0002371!6.42e-07!591;CL:0000144!8.88e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-13;33!CL:0002057;1.13e-13;33!CL:0000473;1.52e-13;39!CL:0000234;1.52e-13;39!CL:0000576;1.73e-13;48!CL:0000766;1.60e-10;69!CL:0002087;2.42e-10;104!CL:0000738;2.53e-09;136!CL:0000236;3.75e-08;13!CL:0000542;1.54e-07;53!CL:0000084;1.92e-07;25!CL:0000451;2.33e-07;10!CL:0000791;3.47e-07;18!CL:0000789;3.47e-07;18!CL:0002419;3.47e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.72e-41,136;CL:0002087,2.10e-36,115;CL:0000037,8.67e-36,168;CL:0000988,3.23e-35,177;CL:0002031,7.24e-35,120;CL:0002032,9.61e-33,161;CL:0000837,9.61e-33,161;CL:0002009,1.27e-25,61;CL:0000766,4.83e-25,72;CL:0000557,1.33e-24,67;CL:0002194,2.61e-24,59;CL:0000576,2.61e-24,59;CL:0000040,2.61e-24,59;CL:0000559,2.61e-24,59;CL:0000134,8.02e-24,354;CL:0000839,8.61e-23,66;CL:0002320,1.76e-22,361;CL:0000219,6.20e-22,386;CL:0000473,6.30e-22,48;CL:0000234,6.30e-22,48;CL:0000763,1.24e-20,108;CL:0000049,1.24e-20,108;CL:0000860,1.62e-19,42;CL:0002057,1.62e-19,42;CL:0000048,1.59e-11,427;CL:0000723,2.84e-11,433;CL:0000542,3.15e-11,53;CL:0000051,3.15e-11,53;CL:0000838,5.27e-11,52;CL:0000034,1.43e-10,441;CL:0000236,1.36e-07,14;CL:0000084,1.91e-07,25;CL:0000827,1.91e-07,25;CL:0000451,2.27e-07,10;CL:0000791,3.33e-07,18;CL:0000789,3.33e-07,18;CL:0002420,3.33e-07,18;CL:0002419,3.33e-07,18;CL:0000790,3.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-14;42!CL:0000051;1.54e-07;53!CL:0000790;3.47e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.59e-25!102;UBERON:0003061!7.59e-25!102;UBERON:0002193!5.20e-24!112;UBERON:0002384!2.58e-19!375;UBERON:0002371!9.39e-19!80;UBERON:0001474!1.86e-16!86;UBERON:0002405!2.33e-15!115;UBERON:0004765!6.99e-15!101;UBERON:0001434!6.99e-15!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.54e-27,98;UBERON:0003061,7.54e-27,98;UBERON:0002193,7.89e-26,108;UBERON:0002405,2.45e-21,93;UBERON:0002371,1.05e-20,76;UBERON:0002384,7.64e-20,371;UBERON:0001474,3.95e-18,82;UBERON:0004765,2.26e-17,90;UBERON:0001434,2.46e-15,100 | |||
|phase1_expression=100.831500495159,82.2146011741375,96.5537668057402,119.087225040225,82.6878024690482,75.0211130726317,45.5939780702959,65.6988668363904,39.7002154863755,36.3686226022233,14.653824527421,63.7848806620103,40.8838816254103,37.7487376528142,40.7618772145336,28.9099812974263,25.915864705031,24.8305430731707,22.9328415431538,55.7738393087849,34.0681154377902,41.6894779565857,51.2362416964592,45.8529323994162,42.4334121830433,37.5189822222441,31.855028706579,32.8223958078042,123.909747207405,184.621940484759,95.676364209335,32.1797428567625,31.9278273904945,22.9247486303408,36.719453075063,32.8410927045944,56.6648847916255,69.8034214750166,69.388378824669,64.6692394733238,80.1617397778929,85.1840341629916,79.5908503989636,80.841420761438,88.8008467668702,83.206332987421,60.431549595478,59.2081758751429,77.4265927237759,80.8415622425243,94.267140002709,148.510840370032,65.1569336592209,83.2675241823136,89.3814811522656,64.3788801235708,64.6787575637095,84.4960301513518,58.7681073352133,103.018217691426,93.9825574924591,108.850929061616,119.279267257736,144.063965680051,52.8180814304023,51.0646702222026,50.4486021686416,85.4245461872927,113.683276215604,145.299337107723,91.4153248976387,97.9618511726922,106.014899792696,132.879575090211,108.002984382242,111.748058055964,81.1012716877695,84.0990599912435,100.453491685675,124.550569014926,124.720756603829,137.18077947724,116.157521344473,97.2126728046594,104.072582702036,87.0529654035675,98.4974128108591,108.053458711443,84.6137437164624,98.2675367171425,116.119445698327,144.460348585251,117.357881034445,75.3376572900447,95.2864557068611,53.2035851245656,81.2411350570131,75.0650556850905,64.7644721848454,73.729244467289,56.7104743942447,53.4996020480249,42.8618802497405,77.3188570783105,75.7137182210332,70.8908462667588,98.5726064104657,57.6410938765538,64.8996144323792,53.1134431869874,53.6119034504546,90.1287596636013,59.1663387016621,77.5868401460168,65.8573799971354,91.1007115288432,64.3810429251228,56.0112736136687,91.3401088190405,74.5443069518386,64.4572619317854,68.4325472002829,75.2875595388864,87.2868688073133,88.7008158521656,74.3480571418213,87.860695670552,95.5615962885232,88.7901450001244,73.8604459802275,82.894334546747,43.5955558807363,54.725176469031,46.2642115052245,55.6485080805837,42.0054904986389,87.4814541756209,66.6689772314611,37.2467179626427,29.490009862521,27.0531139934828,69.8118472402808,30.236508928281,39.6739353779339,191.482962256263,196.766603148172,138.143320979101,468.634076759997,608.602585070056,603.989897161873,35.9759957333736,23.2263340678654,38.8797361800506,37.3103241669846,32.3014565881628,36.0404634941488,27.3783406163222,43.9308490587859,49.4515105134527,49.8733713019359,50.3536646386434,41.0546937087997,35.3889983444846,41.1782649987373,32.4056779152704,40.7206760975404,22.9019960078693,24.6619142258476,26.0638283692002,39.8691577018614,26.3810511259786,65.8902087180316,73.6782501881818,46.2259695271086,36.7759244254536,41.7880688493113,38.2662532550202,121.045053955999,36.5308433664308,42.050820010673,39.4971284199908,25.1600899385503,48.2377104869638,31.1181652480979,31.8750711071245,48.4343768463781,47.8226017318399,27.649928956388,43.7024107562449,37.0806684003892,35.4193372907769,28.8888866663662,34.9645559835164,34.5508984487531,45.3222260185863,37.8329697320245,32.5476210703661,28.5120685747693,36.3482386039479,32.765809029769,20.8399261126709,37.0339450698946,26.0246521333685,49.5944766716687,32.0453663243012,40.7628768412696,28.8457073100666,37.886349175447,70.8589060971005,62.9994297014774,68.665935975698,59.1179459286273,52.5567899116038,39.4190026269813,49.6932006405345,76.6244548375349,78.2419151444425,32.8163906517349,62.5939310767636,89.2286233639842,66.7418033931235,49.0662718368608,42.7292692622429,59.1378210679688,66.5500534241637,58.5081374593568,16.8323714458842,22.662590382974,17.1967035446887,22.1834657732893,22.4565557279309,17.8838905947157,81.3537568115043,70.7565032012174,46.9658732598434,70.1195571328288,58.4722380152364,52.0549920175313,59.0046415273356,66.519044247841,47.867584165859,57.0844143522104,64.3003377791072,43.8201751520534,47.2893730952084,51.5561190308163,32.4788400034845,22.4386838085513,39.099531076483,26.4615680493976,59.5748663662605,61.9181146506904,38.9921338409727,45.9121623391237,42.5539997359173,25.5636037344803,73.2034403675532,12.3641928583382,42.8253422473547,38.3316162956312,35.1872969735151,15.5990217791937,20.2063878835383,27.3595755741181,36.2792865188689,41.144437611906,39.8167540815885,49.4660795809955,18.1747011530633,21.4621540523718,104.642227587144,88.9216207529103,92.448582943589,49.6789320129918,82.9831713302366,61.9557174949229,23.5538914708491,38.6543138223569,27.9869355790604,36.4570796042998,52.7410119739224,39.3923419527467,38.7682674691626,40.523821129868,91.8179551464764,95.4971063895694,56.2643746608226,42.7681115056763,43.0847194426926,109.62521611303,48.3046671145677,42.1612877138556,35.748725644329,35.202377194056,34.386276391568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| |||
|short_description=p1@SFT2D2,p1@TBX19 | |||
}} |
Revision as of 22:08, 10 January 2014
Short description: | p1@SFT2D2, p1@TBX19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFT2D2_5end, CAGE_peak_1_at_TBX19_5end |
Coexpression cluster: | C992_Dendritic_melanoma_immature_CD19_Basophils_CD14_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000271375, ENST00000367825, NM_199344, uc001gfi.3, uc001gfj.3_5end |
EntrezGene: | 375035,9095 |
HGNC: | 11596&submit=Submit 25140, 11596 |
UniProt: | O95562Q5TIH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.54e-27 | 98 |
blood island | 7.54e-27 | 98 |
hemolymphoid system | 7.89e-26 | 108 |
immune system | 2.45e-21 | 93 |
bone marrow | 1.05e-20 | 76 |
connective tissue | 7.64e-20 | 371 |
bone element | 3.95e-18 | 82 |
skeletal element | 2.26e-17 | 90 |
skeletal system | 2.46e-15 | 100 |