FFCP PHASE1:Hg19::chr1:179712397..179712406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28274 | |||
|TSSclassifier=strong | |||
|UniProt=Q96GL9,A8K8R7 | |||
|association_with_transcript=99bp_to_ENST00000341785,NM_173509,uc001gnj.2,uc009wxk.2_5end | |||
|description=CAGE_peak_2_at_FAM163A_5end | |||
|id=chr1:179712397..179712406,+ | |||
|ontology_enrichment_celltype=CL:0002593!6.85e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.87e-36;5!CL:0002553;5.16e-21;1!CL:0002321;1.35e-12;15!CL:0002593;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.45e-21,1;CL:0002593,4.09e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!8.42e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;2.28e-30;6!DOID:171;1.53e-18;10!DOID:3095;8.70e-09;22!DOID:2994;8.70e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.52e-30,6;DOID:171,1.21e-18,10;DOID:3095,7.82e-09,22;DOID:2994,7.82e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.08e-18!57;UBERON:0005068!2.08e-18!57;UBERON:0006241!2.08e-18!57;UBERON:0007135!2.08e-18!57;UBERON:0002616!1.18e-15!59;UBERON:0007023!2.68e-15!115;UBERON:0000073!7.87e-15!94;UBERON:0001016!7.87e-15!94;UBERON:0000955!3.01e-14!69;UBERON:0006238!3.01e-14!69;UBERON:0002780!3.57e-14!41;UBERON:0001890!3.57e-14!41;UBERON:0006240!3.57e-14!41;UBERON:0003080!9.02e-14!42;UBERON:0001017!8.91e-13!82;UBERON:0003075!4.33e-12!86;UBERON:0007284!4.33e-12!86;UBERON:0001872!4.56e-12!5;UBERON:0005743!5.55e-12!86;UBERON:0000025!5.85e-12!194;UBERON:0002346!2.36e-11!90;UBERON:0003056!5.64e-10!61;UBERON:0003296!7.64e-10!4;UBERON:0010133!7.64e-10!4;UBERON:0001950!8.09e-10!20;UBERON:0001894!1.83e-09!7;UBERON:0006222!1.83e-09!7;UBERON:0000153!2.09e-09!129;UBERON:0007811!2.09e-09!129;UBERON:0000007!2.26e-09!2;UBERON:0004111!5.79e-09!241;UBERON:0002456!6.85e-09!2;UBERON:0002619!7.43e-09!22;UBERON:0001893!2.07e-08!34;UBERON:0000013!4.26e-08!5;UBERON:0002410!4.26e-08!5;UBERON:0000033!5.62e-08!123;UBERON:0000477!8.38e-08!286;UBERON:0000956!1.09e-07!25;UBERON:0000203!1.09e-07!25;UBERON:0002298!1.47e-07!8;UBERON:0001869!2.60e-07!32;UBERON:0002791!4.75e-07!33;UBERON:0002020!8.47e-07!34;UBERON:0003528!8.47e-07!34;UBERON:0004121!8.63e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.34e-40;2!UBERON:0000013;2.87e-36;5!UBERON:0002410;2.87e-36;5!UBERON:0003296;6.99e-21;4!UBERON:0010133;6.99e-21;4!UBERON:0000010;1.62e-20;8!UBERON:0001894;2.24e-12;7!UBERON:0002370;3.34e-11;2!UBERON:0005058;3.34e-11;2!UBERON:0002456;3.34e-11;2!UBERON:0009113;3.34e-11;2!UBERON:0000988;5.18e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.34e-40,2;UBERON:0000013,1.78e-36,5;UBERON:0002410,1.78e-36,5;UBERON:0003296,7.00e-21,4;UBERON:0010133,7.00e-21,4;UBERON:0000010,1.24e-20,8;UBERON:0001894,2.24e-12,7;UBERON:0006222,2.24e-12,7;UBERON:0002456,4.09e-11,2;UBERON:0000988,5.18e-08,3;UBERON:0001016,9.79e-08,89;UBERON:0004807,5.94e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931577741257556,0,0,0,0,0,0.406870733204662,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,1.40683808434017,5.60689019262745,0,1.74735421107222,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.19024743058172,0,0,0,0,0,0.535701835878287,0,4.85572483389305,1.13831095675649,0,0,0,2.37894065418911,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,1.05673990496671,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0334225573761,0.682821857254437,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@FAM163A | |||
}} |
Revision as of 22:31, 10 January 2014
Short description: | p2@FAM163A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM163A_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000341785, NM_173509, uc001gnj.2, uc009wxk.2_5end |
EntrezGene: | FAM163A |
HGNC: | 28274 |
UniProt: | Q96GL9A8K8R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.45e-21 | 1 |
smooth muscle cell of the internal thoracic artery | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.34e-40 | 2 |
sympathetic nervous system | 1.78e-36 | 5 |
autonomic nervous system | 1.78e-36 | 5 |
gland of diencephalon | 7.00e-21 | 4 |
neuroendocrine gland | 7.00e-21 | 4 |
peripheral nervous system | 1.24e-20 | 8 |
diencephalon | 2.24e-12 | 7 |
future diencephalon | 2.24e-12 | 7 |
internal thoracic artery | 4.09e-11 | 2 |
pons | 5.18e-08 | 3 |
nervous system | 9.79e-08 | 89 |
respiratory system epithelium | 5.94e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.52e-30 | 6 |
neuroectodermal tumor | 1.21e-18 | 10 |
germ cell and embryonal cancer | 7.82e-09 | 22 |
germ cell cancer | 7.82e-09 | 22 |