FFCP PHASE1:Hg19::chr1:202130674..202130693,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9659 | |||
|TSSclassifier=strong | |||
|UniProt=P35236 | |||
|association_with_transcript=15bp_to_ENST00000309017,uc010ppx.1_5end | |||
|description=CAGE_peak_4_at_PTPN7_5end | |||
|id=chr1:202130674..202130693,- | |||
|ontology_enrichment_celltype=CL:0000763!3.23e-48!112;CL:0000049!3.23e-48!112;CL:0000037!3.49e-43!172;CL:0000566!3.49e-43!172;CL:0002032!1.39e-40!165;CL:0000837!1.39e-40!165;CL:0000988!1.76e-39!182;CL:0000766!3.11e-17!76;CL:0000738!1.47e-15!140;CL:0000557!7.21e-15!71;CL:0000839!6.27e-13!70;CL:0002009!3.68e-12!65;CL:0002194!8.79e-12!63;CL:0000576!8.79e-12!63;CL:0000040!8.79e-12!63;CL:0000559!8.79e-12!63;CL:0002031!5.82e-11!124;CL:0002087!6.31e-11!119;CL:0000134!3.98e-09!358;CL:0002320!1.40e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000763;6.91e-15;100!CL:0000775;2.47e-12;3!CL:0000094;2.63e-12;8!CL:0000235;8.91e-11;6!CL:0000771;3.04e-09;2!CL:0000081;7.19e-09;11!CL:0000840;4.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.14e-43,108;CL:0000049,6.14e-43,108;CL:0000037,1.74e-31,168;CL:0002032,2.13e-31,161;CL:0000837,2.13e-31,161;CL:0000988,1.98e-29,177;CL:0000775,1.99e-12,3;CL:0000094,2.12e-12,8;CL:0000235,1.01e-10,6;CL:0000766,1.30e-10,72;CL:0000134,3.49e-10,354;CL:0002320,8.24e-10,361;CL:0000771,2.63e-09,2;CL:0000081,6.17e-09,11;CL:0000219,1.68e-08,386;CL:0000840,4.50e-07,5;CL:0001029,4.50e-07,5;CL:0000738,4.70e-07,136;CL:0000048,6.59e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000049;7.95e-12;108 | |||
|ontology_enrichment_disease=DOID:1240!3.00e-53!39;DOID:8692!6.20e-49!31;DOID:2531!5.03e-40!51;DOID:0060083!5.03e-40!51;DOID:1036!8.03e-13!8;DOID:0050686!1.64e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.38e-60;31!DOID:1240;4.18e-49;39!DOID:2531;1.57e-32;51!DOID:0060083;1.57e-32;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.81e-64,31;DOID:1240,3.90e-64,39;DOID:2531,2.58e-51,51;DOID:0060083,2.58e-51,51;DOID:0050686,9.15e-15,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.76e-19!102;UBERON:0003061!2.76e-19!102;UBERON:0002193!2.82e-17!112;UBERON:0002371!3.98e-13!80;UBERON:0001474!1.43e-11!86;UBERON:0002405!1.03e-09!115;UBERON:0009663!1.64e-09!7;UBERON:0004765!3.22e-09!101;UBERON:0001434!3.22e-09!101;UBERON:0002384!2.87e-08!375;UBERON:0002308!3.81e-07!9;UBERON:0002420!3.81e-07!9;UBERON:0000125!3.81e-07!9;UBERON:0007245!3.81e-07!9;UBERON:0010009!3.81e-07!9;UBERON:0010011!3.81e-07!9;UBERON:0000454!3.81e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.65e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.550975469195755,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.898893937780338,0,0.641858054152187,0,0.329851300186716,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,1.55974639639243,0,0,0.270803863765016,1.28091319725675,0.910415432919148,2.46656856905514,1.38175008892924,2.02862160014537,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,10.3855165969499,12.0149518736494,10.5036788809903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,6.08411089362018,2.22946743433092,0,0,0,0,0,0,12.3165809473986,0.792435906119034,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,2.24702107184155,5.9832291840805,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0.371606350251437,0,1.13826949357463,3.02909918184762,4.59032554295478,7.4687094351623,13.7587828770524,5.843194924942,4.7735520279288,0.228234679033192,7.67731489287814,2.50634477090067,2.03150133361924,2.08764497634809,3.43059502224781,3.40676990152261,8.24412827413835,5.22309299324379,6.48660712888006,8.00875880217161,16.0218238229673,6.12493582569533,1.23087398947712,2.43410110628385,0.99921590399346,7.04935025439248,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,5.10966490978682,2.5116841023204,5.318773820805,0.902382642468723,0.784250137270958,0.671286347903371,0.569261198172555,2.86085842164682,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,3.83239764200917,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,4.05428572837735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0.297046400327086,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,2.67964130156179,0,0.413731983447581,0.213233981900981,0,0.516711278688049,0.806971285846153,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p4@PTPN7 | |||
}} |
Revision as of 23:23, 10 January 2014
Short description: | p4@PTPN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPN7_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000309017, uc010ppx.1_5end |
EntrezGene: | PTPN7 |
HGNC: | 9659 |
UniProt: | P35236 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.14e-43 | 108 |
common myeloid progenitor | 6.14e-43 | 108 |
hematopoietic stem cell | 1.74e-31 | 168 |
hematopoietic oligopotent progenitor cell | 2.13e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-31 | 161 |
hematopoietic cell | 1.98e-29 | 177 |
neutrophil | 1.99e-12 | 3 |
granulocyte | 2.12e-12 | 8 |
macrophage | 1.01e-10 | 6 |
myeloid leukocyte | 1.30e-10 | 72 |
mesenchymal cell | 3.49e-10 | 354 |
connective tissue cell | 8.24e-10 | 361 |
eosinophil | 2.63e-09 | 2 |
blood cell | 6.17e-09 | 11 |
motile cell | 1.68e-08 | 386 |
immature conventional dendritic cell | 4.50e-07 | 5 |
common dendritic progenitor | 4.50e-07 | 5 |
leukocyte | 4.70e-07 | 136 |
multi fate stem cell | 6.59e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.65e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.81e-64 | 31 |
leukemia | 3.90e-64 | 39 |
hematologic cancer | 2.58e-51 | 51 |
immune system cancer | 2.58e-51 | 51 |
organ system cancer | 9.15e-15 | 137 |